Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400052824
CDS Infomation

pacid=37471218 polypeptide=PGSC0003DMP400035616 locus=PGSC0003DMG400020501 ID=PGSC0003DMT400052824.v4.03 annot-version=v4.03
Sequence

ATGGCACTTTCGGCTCTTTCACCGACTTTCTCTACAAACCCTTCTGCATCATCAACTTCT
TTATCAAAAACAAGAAGAATCACCCAAAAAAATCCCAAATTTAGTGTCTTTACTACCCCT
AAATTCACTCCAATTTCAGCTCTTTCTGATCCATATGTCCTCCAAATAGCTGAAACTCTT
GAAGATTCATTACCTTCTACCTCTTCTACACCACTTCAGAAGTTAAGAATCAGTTCCTCA
GACACCCTTTTGTCAACCCCTTGGCCATCTCGTAAAGATGAGCCTTTTAGATTCACTGAC
ACTTCTTTTATCAAGAATTCAAGAATTGAACCAATTCAACCTCCAAAGATTCCATCTTTG
AGTTCTTTGGATATTTCTGTAGATACCCTTTTGCCTACACTTACAATTGTTGATGGTTAT
ATAATGGATTCTTTGTCTCAGTTGAATGAATTTCCTAGTGGGGTTTATGTAGGTAGTCTG
TTGAGGGTAGATTCTGAGGCTATAATGAAAAGGGTGTCTGAATATGAGTTTAGTTTTAAA
GGGGATTTGTTTTGGTTACTTAATGGTGTAGGTACCCCTGATGTAGTACTAGTGTATGTG
CCAGAAGGGTGTAAGGTTGAGAATCCATTGCTATTAAGGTACATTTCTGCTGAAGGTAGT
GATAAAGAGTCAAAAGCTTTGCCTTTTTCGAACCCGAGGGTGTTGGTGTTAGTGGAGAAG
GGAGGTGAGATTAGTATAGTTGAAGAGTATGTAGGTGGAGATACGGATAAATGTTACTGG
ACGAATTCCGTTATGGAAGTGGTTGTTGGGGAAGGAGCAAAGGTGAGCCATTCTTACATC
CAAAATCAATCTTTCAATGCTGCACATATCAAGTGGACTTGGGTTCAGCAGGAATCAACT
AGCAAATACGAGCATATAGAAGTAAGCACTGGTGGAAAGTTAAGCAGGCACAATATTCAC
ATCCAGCAGGTTGGTCCAGACACTGTTACTGAGTTATCAACGTTTCATATGTGTATCTCG
GATCAAACACAAGATCTGCACAGTAAATTAGTCCTAGATCATCCACGAGGTGTCTCTCAG
CAGATCCATAAGTGCATTGTGGCCCATTCGTCTGGACAGGCTGTTTTTGATGGAAACGTT
CAAGTCAATAGATATGCGCAGCAGACAGATGCAGGACAACTTACACGAAGTCTCCTTTTG
GAGCCTCGGGCAACTGTGAATGTCAAACCTAATCTCCAAATCATCGCTGATGATGTCAAG
TGTTCCCATGGGGCTGCAATCAGTGACCTCGAAGAGGACCAACTGTTTTACTTCAGGGCA
CGGGGTGTTGATGCTGAAACTGCCAGAAAAGCTCTGATCTTTTCGTTTGCAGCTGAAGTA
GTAGACCGTTTTCCAAATGCCTCGATTAGAAAGAAAGTTGAAACTCACATTAGAGAACTG
CTAGATCCCTCACGCCCTTCACGGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400035616
PEP Infomation

pacid=37471218 transcript=PGSC0003DMT400052824 locus=PGSC0003DMG400020501 ID=PGSC0003DMT400052824.v4.03 annot-version=v4.03
Sequence

MALSALSPTFSTNPSASSTSLSKTRRITQKNPKFSVFTTPKFTPISALSDPYVLQIAETL
EDSLPSTSSTPLQKLRISSSDTLLSTPWPSRKDEPFRFTDTSFIKNSRIEPIQPPKIPSL
SSLDISVDTLLPTLTIVDGYIMDSLSQLNEFPSGVYVGSLLRVDSEAIMKRVSEYEFSFK
GDLFWLLNGVGTPDVVLVYVPEGCKVENPLLLRYISAEGSDKESKALPFSNPRVLVLVEK
GGEISIVEEYVGGDTDKCYWTNSVMEVVVGEGAKVSHSYIQNQSFNAAHIKWTWVQQEST
SKYEHIEVSTGGKLSRHNIHIQQVGPDTVTELSTFHMCISDQTQDLHSKLVLDHPRGVSQ
QIHKCIVAHSSGQAVFDGNVQVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVK
CSHGAAISDLEEDQLFYFRARGVDAETARKALIFSFAAEVVDRFPNASIRKKVETHIREL
LDPSRPSR*

Transcript Sequence

Transcript ID

PGSC0003DMT400052824
Transcript Infomation

pacid=37471218 locus=PGSC0003DMG400020501 ID=PGSC0003DMT400052824.v4.03 annot-version=v4.03
Sequence

ATGGCACTTTCGGCTCTTTCACCGACTTTCTCTACAAACCCTTCTGCATCATCAACTTCT
TTATCAAAAACAAGAAGAATCACCCAAAAAAATCCCAAATTTAGTGTCTTTACTACCCCT
AAATTCACTCCAATTTCAGCTCTTTCTGATCCATATGTCCTCCAAATAGCTGAAACTCTT
GAAGATTCATTACCTTCTACCTCTTCTACACCACTTCAGAAGTTAAGAATCAGTTCCTCA
GACACCCTTTTGTCAACCCCTTGGCCATCTCGTAAAGATGAGCCTTTTAGATTCACTGAC
ACTTCTTTTATCAAGAATTCAAGAATTGAACCAATTCAACCTCCAAAGATTCCATCTTTG
AGTTCTTTGGATATTTCTGTAGATACCCTTTTGCCTACACTTACAATTGTTGATGGTTAT
ATAATGGATTCTTTGTCTCAGTTGAATGAATTTCCTAGTGGGGTTTATGTAGGTAGTCTG
TTGAGGGTAGATTCTGAGGCTATAATGAAAAGGGTGTCTGAATATGAGTTTAGTTTTAAA
GGGGATTTGTTTTGGTTACTTAATGGTGTAGGTACCCCTGATGTAGTACTAGTGTATGTG
CCAGAAGGGTGTAAGGTTGAGAATCCATTGCTATTAAGGTACATTTCTGCTGAAGGTAGT
GATAAAGAGTCAAAAGCTTTGCCTTTTTCGAACCCGAGGGTGTTGGTGTTAGTGGAGAAG
GGAGGTGAGATTAGTATAGTTGAAGAGTATGTAGGTGGAGATACGGATAAATGTTACTGG
ACGAATTCCGTTATGGAAGTGGTTGTTGGGGAAGGAGCAAAGGTGAGCCATTCTTACATC
CAAAATCAATCTTTCAATGCTGCACATATCAAGTGGACTTGGGTTCAGCAGGAATCAACT
AGCAAATACGAGCATATAGAAGTAAGCACTGGTGGAAAGTTAAGCAGGCACAATATTCAC
ATCCAGCAGGTTGGTCCAGACACTGTTACTGAGTTATCAACGTTTCATATGTGTATCTCG
GATCAAACACAAGATCTGCACAGTAAATTAGTCCTAGATCATCCACGAGGTGTCTCTCAG
CAGATCCATAAGTGCATTGTGGCCCATTCGTCTGGACAGGCTGTTTTTGATGGAAACGTT
CAAGTCAATAGATATGCGCAGCAGACAGATGCAGGACAACTTACACGAAGTCTCCTTTTG
GAGCCTCGGGCAACTGTGAATGTCAAACCTAATCTCCAAATCATCGCTGATGATGTCAAG
TGTTCCCATGGGGCTGCAATCAGTGACCTCGAAGAGGACCAACTGTTTTACTTCAGGGCA
CGGGGTGTTGATGCTGAAACTGCCAGAAAAGCTCTGATCTTTTCGTTTGCAGCTGAAGTA
GTAGACCGTTTTCCAAATGCCTCGATTAGAAAGAAAGTTGAAACTCACATTAGAGAACTG
CTAGATCCCTCACGCCCTTCACGGTGA