Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400052816
CDS Infomation

pacid=37469403 polypeptide=PGSC0003DMP400035612 locus=PGSC0003DMG400020498 ID=PGSC0003DMT400052816.v4.03 annot-version=v4.03
Sequence

ATGAAAACAAGAAGAGGAAAAAGATCAGAGGCATTTTGGCCTTCAATTGTGATGAAGAAA
TGGTTGAATATTCAGCCTAAACTTTATGATTTTAGTGAAGATGAAGTTGATACTGAGACA
GAGAGTGAGGATGATGTTTGTTCACTTAAAGATGAAAGGGTGCATGAAGATCATTGGCAC
AGATCACCAGGAAAACCTACTGATTGCCAGCCTCAAACTTCAGGGAAGACTTCAACCAAG
TATTCATCTAGACACAGGAGAGGGAAATCAGAAACTCTGAGAGTTCAGTATATTAATACA
AAAGAAGTGAGAGTTACTATAGGAACTTGGAATGTTGCTGGAAGACTTCCAGATGAGGAT
CTTGAGATTGATGAGTGGCTTTGTATGAATGAACCAGCTGATATATACATCCTTGGTTTC
CAAGAGGTAGTTCCTCTCAATGCTGGAAATGTACTGGGAGCAGAAAATAGAAGGCCAATT
CCAAAATGGGAGACGATTATACGCAGAACGTTAAACAGAACGACAGTGGAACCTGAGGCT
AAGCTAAAGAGTTACAGTGCTCCACCGTCTCCGGTGTTAAGGACTTCTTCTGCAGCTGAT
ATAATTGCTGATGTGGTAACTACTACTACTGCACTAGATATAATGGCAGAGGTGTCGATG
AACACCAGGTTTTTCACTGAAGATAACATGATCAACCTGAGGAGGAACTTGCAATTAAAG
AGAATATATGGCATTGATTGTGATAGTCGATTGGATTGGCCTGAACGTTCACTCGATGCA
ACGCCTCAGGTCCTTTCTTCGACTTTTAAGTTGAGAAGAGTATCAAGCAGCTGTGCTCTA
GCTTTTAGCAATCATGATGTTGGATTAGATGGTAGCAGGTTAAAAAGAGGGCACCAAAGC
TCCAAAGACTTGGGATCGTTGTGGACGAATCAACAAGAGGAACCTGAAGTTCTTGATGCT
CTTTCTGATGGCTCCGATCAATTTTCTGACGAGGAAAATGATCTCTTCGAGGAATTCACA
GAGTTCGAAGATGAAAGATCACTTCTAAAACATGGTGTGAATTCACATCCGAGGTATATT
CGTATTGTTAGCAAGCAGATGGTTGGGATATATGTATCGATTTGGGTCCGTAGGAGGTTG
AGAAGGCACATAAACAACTTGCAAGTCTCCCCCGTCGGAGTTGGACTTATGGGATACATG
GGAAACAAGGGATCTGTTTCTGTGAGCATGTCTCTTTTCCAGTCAAGGCTATGCTTTGTT
TGTTCACATTTAACTTCTGGCCAAAAGGACAGGGCGGATCAAAGGCGTAACGCTGATGTA
TACGAAATTATGAAGCGCACACATTTCTCATCTGTATTCGACACTGATGCAGATCAACCA
CAAACAATTCCATCTCATGATCAGATATTCTGGTTCGGGGATCTGAATTATCGAATCAAT
ATGTTGGATGCTGAGGTGCGGAAGCTAGTCGCCAGAAAACAATGGGATGAACTTCTCAAC
AACGATGAGTTAATCAACGAACTTCGAAATGGCCATGTTTTTGCCGGTTGGAAAGAAGGG
GATATTAACTTTGCACCAACATACAAGTATGAGATCAACACGGATAGATATGTCGGGGAG
AGTCCAAGAGAAGGGGAAAAGAAGAGATCGCCGGCTTGGTGTGACCGTATACTGTGGTTA
GGGAAAGGTATAAAACAGCTCTTTTACAAGCGAGCCGAGTTAAAACTATCTGATCACAAG
CCTGTAAGCTCAATGTTCTCGGTAGAAGTTGAAGTATTCGATCACAGAAAGCTCCAGAGA
GTCCTCAATGTTAACACTGCCGCTGTACATCCAGAGATCCTGCTAGATATTGAAGAGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400035612
PEP Infomation

pacid=37469403 transcript=PGSC0003DMT400052816 locus=PGSC0003DMG400020498 ID=PGSC0003DMT400052816.v4.03 annot-version=v4.03
Sequence

MKTRRGKRSEAFWPSIVMKKWLNIQPKLYDFSEDEVDTETESEDDVCSLKDERVHEDHWH
RSPGKPTDCQPQTSGKTSTKYSSRHRRGKSETLRVQYINTKEVRVTIGTWNVAGRLPDED
LEIDEWLCMNEPADIYILGFQEVVPLNAGNVLGAENRRPIPKWETIIRRTLNRTTVEPEA
KLKSYSAPPSPVLRTSSAADIIADVVTTTTALDIMAEVSMNTRFFTEDNMINLRRNLQLK
RIYGIDCDSRLDWPERSLDATPQVLSSTFKLRRVSSSCALAFSNHDVGLDGSRLKRGHQS
SKDLGSLWTNQQEEPEVLDALSDGSDQFSDEENDLFEEFTEFEDERSLLKHGVNSHPRYI
RIVSKQMVGIYVSIWVRRRLRRHINNLQVSPVGVGLMGYMGNKGSVSVSMSLFQSRLCFV
CSHLTSGQKDRADQRRNADVYEIMKRTHFSSVFDTDADQPQTIPSHDQIFWFGDLNYRIN
MLDAEVRKLVARKQWDELLNNDELINELRNGHVFAGWKEGDINFAPTYKYEINTDRYVGE
SPREGEKKRSPAWCDRILWLGKGIKQLFYKRAELKLSDHKPVSSMFSVEVEVFDHRKLQR
VLNVNTAAVHPEILLDIEE*

Transcript Sequence

Transcript ID

PGSC0003DMT400052816
Transcript Infomation

pacid=37469403 locus=PGSC0003DMG400020498 ID=PGSC0003DMT400052816.v4.03 annot-version=v4.03
Sequence

ATGAAAACAAGAAGAGGAAAAAGATCAGAGGCATTTTGGCCTTCAATTGTGATGAAGAAA
TGGTTGAATATTCAGCCTAAACTTTATGATTTTAGTGAAGATGAAGTTGATACTGAGACA
GAGAGTGAGGATGATGTTTGTTCACTTAAAGATGAAAGGGTGCATGAAGATCATTGGCAC
AGATCACCAGGAAAACCTACTGATTGCCAGCCTCAAACTTCAGGGAAGACTTCAACCAAG
TATTCATCTAGACACAGGAGAGGGAAATCAGAAACTCTGAGAGTTCAGTATATTAATACA
AAAGAAGTGAGAGTTACTATAGGAACTTGGAATGTTGCTGGAAGACTTCCAGATGAGGAT
CTTGAGATTGATGAGTGGCTTTGTATGAATGAACCAGCTGATATATACATCCTTGGTTTC
CAAGAGGTAGTTCCTCTCAATGCTGGAAATGTACTGGGAGCAGAAAATAGAAGGCCAATT
CCAAAATGGGAGACGATTATACGCAGAACGTTAAACAGAACGACAGTGGAACCTGAGGCT
AAGCTAAAGAGTTACAGTGCTCCACCGTCTCCGGTGTTAAGGACTTCTTCTGCAGCTGAT
ATAATTGCTGATGTGGTAACTACTACTACTGCACTAGATATAATGGCAGAGGTGTCGATG
AACACCAGGTTTTTCACTGAAGATAACATGATCAACCTGAGGAGGAACTTGCAATTAAAG
AGAATATATGGCATTGATTGTGATAGTCGATTGGATTGGCCTGAACGTTCACTCGATGCA
ACGCCTCAGGTCCTTTCTTCGACTTTTAAGTTGAGAAGAGTATCAAGCAGCTGTGCTCTA
GCTTTTAGCAATCATGATGTTGGATTAGATGGTAGCAGGTTAAAAAGAGGGCACCAAAGC
TCCAAAGACTTGGGATCGTTGTGGACGAATCAACAAGAGGAACCTGAAGTTCTTGATGCT
CTTTCTGATGGCTCCGATCAATTTTCTGACGAGGAAAATGATCTCTTCGAGGAATTCACA
GAGTTCGAAGATGAAAGATCACTTCTAAAACATGGTGTGAATTCACATCCGAGGTATATT
CGTATTGTTAGCAAGCAGATGGTTGGGATATATGTATCGATTTGGGTCCGTAGGAGGTTG
AGAAGGCACATAAACAACTTGCAAGTCTCCCCCGTCGGAGTTGGACTTATGGGATACATG
GGAAACAAGGGATCTGTTTCTGTGAGCATGTCTCTTTTCCAGTCAAGGCTATGCTTTGTT
TGTTCACATTTAACTTCTGGCCAAAAGGACAGGGCGGATCAAAGGCGTAACGCTGATGTA
TACGAAATTATGAAGCGCACACATTTCTCATCTGTATTCGACACTGATGCAGATCAACCA
CAAACAATTCCATCTCATGATCAGATATTCTGGTTCGGGGATCTGAATTATCGAATCAAT
ATGTTGGATGCTGAGGTGCGGAAGCTAGTCGCCAGAAAACAATGGGATGAACTTCTCAAC
AACGATGAGTTAATCAACGAACTTCGAAATGGCCATGTTTTTGCCGGTTGGAAAGAAGGG
GATATTAACTTTGCACCAACATACAAGTATGAGATCAACACGGATAGATATGTCGGGGAG
AGTCCAAGAGAAGGGGAAAAGAAGAGATCGCCGGCTTGGTGTGACCGTATACTGTGGTTA
GGGAAAGGTATAAAACAGCTCTTTTACAAGCGAGCCGAGTTAAAACTATCTGATCACAAG
CCTGTAAGCTCAATGTTCTCGGTAGAAGTTGAAGTATTCGATCACAGAAAGCTCCAGAGA
GTCCTCAATGTTAACACTGCCGCTGTACATCCAGAGATCCTGCTAGATATTGAAGAGTAA