Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400052807
CDS Infomation

pacid=37468829 polypeptide=PGSC0003DMP400035603 locus=PGSC0003DMG400020494 ID=PGSC0003DMT400052807.v4.03 annot-version=v4.03
Sequence

ATGACTTGGCCATTGCTTTTTCTCTTGTTTTCATCTTTTGCTTTTTCTCATGCACAACTT
ACATTGGACTACTATGCTAAAACATGTCCACAATTTGATTCCATTGTGAGGGACATCTCT
CAACAAAAACAAACGGAATTCCCCGCCACGGCGGCCGCGACCCTCCGCGTCTTTTTCCAC
GACTGTGCTGTAGATGGTTGTGATGCCTCCATCCTTATCAAACCAACCGCCTTCAACAAA
TCCGAGCTCGACTACGACATCAACCATTCCCTCGCGGGTGACGCGTTTGACCTAATCACC
CGCATCAAGACCGCGGTCGAGCTCGCTTGCCCGGGCGTTGTGTCGTGCGCGGACATCTTA
GCGACCGCCACCCGAAACCTCATCGTCATAACCGGTGGTCCCCACTACAAAGTCCAGTTG
GGCCGGAAGGACAGTCTAGTTTCCAACGTATCAAACGTGGAAGCACACCTGACGCGTGCT
AACGCGACGGTTGACCTAATGATCAATAAATTCCAATCCATGGGGTTTGATGTCAAGGAC
ATGGTTGTGTTGATTGGTGGTGGACATACAATTGGATTTGTTCATTGTAAGGAGTTTGCT
CATAGGATATTCCCAACTCCTGACCCTACAATGAACCCAATATTAGTTGAAAGATTGAGA
AAAATGTGTGCAAATTATACAAGTAACAATGACATGTCAGCCTTCCTAGATGTTATAAGT
CCTGGTAATTTTGACAATGTGTTGTTCAAGAATTTAATGAAGGGCATAGGGGTACTAGGT
TCAGACCAATTATTACATAGTGACCCTAGGACAAAGCCATTTGTTGAATTATATGCCAAT
AATGCTATTGCATTTGCTAATGATTTTGCTCAAGCAATGGAGAAAGTGAGTGTATATCAA
GTCAAGATTGGTCAACAAGGAGAGGTGAGGAAGAGATGTGATTCTATTAATCACATTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400035603
PEP Infomation

pacid=37468829 transcript=PGSC0003DMT400052807 locus=PGSC0003DMG400020494 ID=PGSC0003DMT400052807.v4.03 annot-version=v4.03
Sequence

MTWPLLFLLFSSFAFSHAQLTLDYYAKTCPQFDSIVRDISQQKQTEFPATAAATLRVFFH
DCAVDGCDASILIKPTAFNKSELDYDINHSLAGDAFDLITRIKTAVELACPGVVSCADIL
ATATRNLIVITGGPHYKVQLGRKDSLVSNVSNVEAHLTRANATVDLMINKFQSMGFDVKD
MVVLIGGGHTIGFVHCKEFAHRIFPTPDPTMNPILVERLRKMCANYTSNNDMSAFLDVIS
PGNFDNVLFKNLMKGIGVLGSDQLLHSDPRTKPFVELYANNAIAFANDFAQAMEKVSVYQ
VKIGQQGEVRKRCDSINHI*

Transcript Sequence

Transcript ID

PGSC0003DMT400052807
Transcript Infomation

pacid=37468829 locus=PGSC0003DMG400020494 ID=PGSC0003DMT400052807.v4.03 annot-version=v4.03
Sequence

ATGACTTGGCCATTGCTTTTTCTCTTGTTTTCATCTTTTGCTTTTTCTCATGCACAACTT
ACATTGGACTACTATGCTAAAACATGTCCACAATTTGATTCCATTGTGAGGGACATCTCT
CAACAAAAACAAACGGAATTCCCCGCCACGGCGGCCGCGACCCTCCGCGTCTTTTTCCAC
GACTGTGCTGTAGATGGTTGTGATGCCTCCATCCTTATCAAACCAACCGCCTTCAACAAA
TCCGAGCTCGACTACGACATCAACCATTCCCTCGCGGGTGACGCGTTTGACCTAATCACC
CGCATCAAGACCGCGGTCGAGCTCGCTTGCCCGGGCGTTGTGTCGTGCGCGGACATCTTA
GCGACCGCCACCCGAAACCTCATCGTCATAACCGGTGGTCCCCACTACAAAGTCCAGTTG
GGCCGGAAGGACAGTCTAGTTTCCAACGTATCAAACGTGGAAGCACACCTGACGCGTGCT
AACGCGACGGTTGACCTAATGATCAATAAATTCCAATCCATGGGGTTTGATGTCAAGGAC
ATGGTTGTGTTGATTGGTGGTGGACATACAATTGGATTTGTTCATTGTAAGGAGTTTGCT
CATAGGATATTCCCAACTCCTGACCCTACAATGAACCCAATATTAGTTGAAAGATTGAGA
AAAATGTGTGCAAATTATACAAGTAACAATGACATGTCAGCCTTCCTAGATGTTATAAGT
CCTGGTAATTTTGACAATGTGTTGTTCAAGAATTTAATGAAGGGCATAGGGGTACTAGGT
TCAGACCAATTATTACATAGTGACCCTAGGACAAAGCCATTTGTTGAATTATATGCCAAT
AATGCTATTGCATTTGCTAATGATTTTGCTCAAGCAATGGAGAAAGTGAGTGTATATCAA
GTCAAGATTGGTCAACAAGGAGAGGTGAGGAAGAGATGTGATTCTATTAATCACATTTGA