Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400052795
CDS Infomation

pacid=37469192 polypeptide=PGSC0003DMP400035593 locus=PGSC0003DMG400020489 ID=PGSC0003DMT400052795.v4.03 annot-version=v4.03
Sequence

ATGGCAACTAATTGCAATGGAAATGGAGCTCCAATTTTATCTCCCAAGTTGCAAGTTGAA
GCAATTCAAACTGTGATACCAATGAAGATAACCGATCCACGATTCTCGAGGCGAATCGCG
ATACCTGAGAATTTCGACTTAGGTAATCTACAAAGGCGTTTTCACATGATTTTGTACTAC
AACAAGGCGTCAGAGACAGATTCAGGATGGATAGTCGCTGGTTGGTTTAAGGAGTCATTG
GGAAGTGCAATAGTTGAAAATCCAATATTTGCTGGAAGATTAAGAAAATTAGAGGATGAT
TTTGAATTAGTTTCAAATGATTCTGGTGTTAGAATGCTTGAGGCTAATTTTCCAATGAAT
ATGGTTGATTTTATTGATCTCAAGAAGAAGGAAAATATTGAAAATGAACTTGTTTATTGG
GAAGATATTCATGAAACAAGTCCTCAATTTTCTCCCCTTTTCTTAATCCAGGTGACAAAT
TTCAAGTGCGGAGGATACTCAATTGGAATAAGTTGTAGCTTATTTCTAGCTGACCCTTTT
GCTATGACAAGTTTTTTAAAATCTTGGTCCAAAATCCACAACAACCTTGTCTCACAAATT
GACTCGCCAAAAATACCAGCATTTTACACACCAAATTTCACAAAAATTGGCTCTTCACCA
ACTCTATCTACGACAAGTCCAAAAACAAAAAATCAAATCACAAATACTCTAATTTTCAAG
AATCCCAAAACCCCTTTGAAAATGAACAACAATGAATTCCTCAAGAATCTTACATCAAAA
TGTATTGGAGAAATAGAGGGAAAAATTGGTAAAAATATATCTTCAAATTTCACTATTTTA
GTGAAAGAGAATTTTGAAAGTATTAAGATGGAAAATTGTTCAAGAGAGGAGATAATTAAG
GAGGAGGAAAGTGGATTATTATCTATAATTTCAACAAATTGGAATGATTTGGGAGCTGAT
AAAGTAAGATTTATTGAAGGAAATGAGGCTATTCATGTTTCATGTTGGATTATTAATGGA
GAAAATAATCAAGATCTTGTGATGATTAGTCCAACTAATGATGAAGACAGCTCTGAACTA
AACATTATAATTACAATCTCTAAATAG

Peptide Sequence

PEP ID

PGSC0003DMP400035593
PEP Infomation

pacid=37469192 transcript=PGSC0003DMT400052795 locus=PGSC0003DMG400020489 ID=PGSC0003DMT400052795.v4.03 annot-version=v4.03
Sequence

MATNCNGNGAPILSPKLQVEAIQTVIPMKITDPRFSRRIAIPENFDLGNLQRRFHMILYY
NKASETDSGWIVAGWFKESLGSAIVENPIFAGRLRKLEDDFELVSNDSGVRMLEANFPMN
MVDFIDLKKKENIENELVYWEDIHETSPQFSPLFLIQVTNFKCGGYSIGISCSLFLADPF
AMTSFLKSWSKIHNNLVSQIDSPKIPAFYTPNFTKIGSSPTLSTTSPKTKNQITNTLIFK
NPKTPLKMNNNEFLKNLTSKCIGEIEGKIGKNISSNFTILVKENFESIKMENCSREEIIK
EEESGLLSIISTNWNDLGADKVRFIEGNEAIHVSCWIINGENNQDLVMISPTNDEDSSEL
NIIITISK*

Transcript Sequence

Transcript ID

PGSC0003DMT400052795
Transcript Infomation

pacid=37469192 locus=PGSC0003DMG400020489 ID=PGSC0003DMT400052795.v4.03 annot-version=v4.03
Sequence

ATGGCAACTAATTGCAATGGAAATGGAGCTCCAATTTTATCTCCCAAGTTGCAAGTTGAA
GCAATTCAAACTGTGATACCAATGAAGATAACCGATCCACGATTCTCGAGGCGAATCGCG
ATACCTGAGAATTTCGACTTAGGTAATCTACAAAGGCGTTTTCACATGATTTTGTACTAC
AACAAGGCGTCAGAGACAGATTCAGGATGGATAGTCGCTGGTTGGTTTAAGGAGTCATTG
GGAAGTGCAATAGTTGAAAATCCAATATTTGCTGGAAGATTAAGAAAATTAGAGGATGAT
TTTGAATTAGTTTCAAATGATTCTGGTGTTAGAATGCTTGAGGCTAATTTTCCAATGAAT
ATGGTTGATTTTATTGATCTCAAGAAGAAGGAAAATATTGAAAATGAACTTGTTTATTGG
GAAGATATTCATGAAACAAGTCCTCAATTTTCTCCCCTTTTCTTAATCCAGGTGACAAAT
TTCAAGTGCGGAGGATACTCAATTGGAATAAGTTGTAGCTTATTTCTAGCTGACCCTTTT
GCTATGACAAGTTTTTTAAAATCTTGGTCCAAAATCCACAACAACCTTGTCTCACAAATT
GACTCGCCAAAAATACCAGCATTTTACACACCAAATTTCACAAAAATTGGCTCTTCACCA
ACTCTATCTACGACAAGTCCAAAAACAAAAAATCAAATCACAAATACTCTAATTTTCAAG
AATCCCAAAACCCCTTTGAAAATGAACAACAATGAATTCCTCAAGAATCTTACATCAAAA
TGTATTGGAGAAATAGAGGGAAAAATTGGTAAAAATATATCTTCAAATTTCACTATTTTA
GTGAAAGAGAATTTTGAAAGTATTAAGATGGAAAATTGTTCAAGAGAGGAGATAATTAAG
GAGGAGGAAAGTGGATTATTATCTATAATTTCAACAAATTGGAATGATTTGGGAGCTGAT
AAAGTAAGATTTATTGAAGGAAATGAGGCTATTCATGTTTCATGTTGGATTATTAATGGA
GAAAATAATCAAGATCTTGTGATGATTAGTCCAACTAATGATGAAGACAGCTCTGAACTA
AACATTATAATTACAATCTCTAAATAG