Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400052757
CDS Infomation

pacid=37453100 polypeptide=PGSC0003DMP400035567 locus=PGSC0003DMG400020476 ID=PGSC0003DMT400052757.v4.03 annot-version=v4.03
Sequence

ATGGGAGATACAAAGGAAAACGAAGCTTACGAGGAAGAACTTCTCGACTACGAAGAAGAT
GATGAGAAGGCCCCAGATTCCGTTAATGGAAAAGTAAACGGCGAGTCTGCCAAGAAGGGT
TATGTTGGAATTCACAGTTCTGGATTCAGAGACTTTCTTTTAAAGCCAGAGCTACTGCGG
GCTATTGTGGATTCAGGGTTTGAGCATCCCTCTGAAGTGCAACATGAGTGTATTCCACAA
GCTATTTTGGGTATGGATGTTATTTGTCAAGCCAAATCTGGAATGGGCAAAACTGCTGTT
TTTGTTCTTTCGACTCTGCAGCAGATTGAACCTGTTCCTGGTCAGGTTGCTGCTTTGGTC
TTATGTCATACAAGGGAATTAGCTTATCAGATTTGTCATGAATTTGAGAGGTTCAGCACA
TATTTGCCTGATATCAAGGTTGCTGTCTTCTATGGTGGTGTCAATATCAAACTTCACAAG
GAGCTTCTGAAGAATGAATGTCCTCATGTTGTTGTTGGAACTCCTGGAAGAGTACTTGCA
TTGGCTAGAGAGAAAGACCTATCTCTGAAGAATGTGAGGCATTTTATTCTGGATGAATGT
GACAAGATGCTTGATTCTCTTGACATGAGGAGAGATGTGCAGGCAATCTTCAAGATGACT
CCCCATGACAAGCAAGTAATGATGTTTTCAGCAACACTCAGCAAGGAGATCCGTCCAGTC
TGCAAAAAATTTATGCAAGATCCAATGGAGATTTATGTTGACGATGAGGCAAAGTTGACC
CTTCATGGACTTGTACAGCATTACATCAAATTGAGTGAAACGGAGAAAAACCGGAAGCTA
AATGATCTGCTGGATGCCTTGGACTTCAATCAAGTAGTTATATTTGTCAAGAGTGTGAAC
AGAGCAGCAGAGCTGAATAAATTACTAGCGGAGTGTAATTTTCCATCTATCTGCATCCAC
TCTGGCATGACTCAGGAAGAAAGATTGACTCGCTACAAATCTTTCAAGGAGGGTCATAAG
AGAATTCTCGTGGCAACTGATTTGGTTGGTAGGGGCATTGACATTGAAAGGGTCAACATT
GTTATTAACTATGACATGCCAGATTCTGCAGACACTTACCTTCACAGAGTGGGTAGAGCT
GGTAGGTTTGGAACGAAAGGCCTTGCCATTACATTTGTGTCCTCTGCATCAGATTCTGAA
GTTCTTAATCAGGTTCAGGAAAGGTTTGAAGTAGACATAAAAGAGCTTCCTGAGCAGATT
GATACTTCTACATACATGCCATCTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400035567
PEP Infomation

pacid=37453100 transcript=PGSC0003DMT400052757 locus=PGSC0003DMG400020476 ID=PGSC0003DMT400052757.v4.03 annot-version=v4.03
Sequence

MGDTKENEAYEEELLDYEEDDEKAPDSVNGKVNGESAKKGYVGIHSSGFRDFLLKPELLR
AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPVPGQVAALV
LCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKLHKELLKNECPHVVVGTPGRVLA
LAREKDLSLKNVRHFILDECDKMLDSLDMRRDVQAIFKMTPHDKQVMMFSATLSKEIRPV
CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSETEKNRKLNDLLDALDFNQVVIFVKSVN
RAAELNKLLAECNFPSICIHSGMTQEERLTRYKSFKEGHKRILVATDLVGRGIDIERVNI
VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSEVLNQVQERFEVDIKELPEQI
DTSTYMPS*

Transcript Sequence

Transcript ID

PGSC0003DMT400052757
Transcript Infomation

pacid=37453100 locus=PGSC0003DMG400020476 ID=PGSC0003DMT400052757.v4.03 annot-version=v4.03
Sequence

ATGGGAGATACAAAGGAAAACGAAGCTTACGAGGAAGAACTTCTCGACTACGAAGAAGAT
GATGAGAAGGCCCCAGATTCCGTTAATGGAAAAGTAAACGGCGAGTCTGCCAAGAAGGGT
TATGTTGGAATTCACAGTTCTGGATTCAGAGACTTTCTTTTAAAGCCAGAGCTACTGCGG
GCTATTGTGGATTCAGGGTTTGAGCATCCCTCTGAAGTGCAACATGAGTGTATTCCACAA
GCTATTTTGGGTATGGATGTTATTTGTCAAGCCAAATCTGGAATGGGCAAAACTGCTGTT
TTTGTTCTTTCGACTCTGCAGCAGATTGAACCTGTTCCTGGTCAGGTTGCTGCTTTGGTC
TTATGTCATACAAGGGAATTAGCTTATCAGATTTGTCATGAATTTGAGAGGTTCAGCACA
TATTTGCCTGATATCAAGGTTGCTGTCTTCTATGGTGGTGTCAATATCAAACTTCACAAG
GAGCTTCTGAAGAATGAATGTCCTCATGTTGTTGTTGGAACTCCTGGAAGAGTACTTGCA
TTGGCTAGAGAGAAAGACCTATCTCTGAAGAATGTGAGGCATTTTATTCTGGATGAATGT
GACAAGATGCTTGATTCTCTTGACATGAGGAGAGATGTGCAGGCAATCTTCAAGATGACT
CCCCATGACAAGCAAGTAATGATGTTTTCAGCAACACTCAGCAAGGAGATCCGTCCAGTC
TGCAAAAAATTTATGCAAGATCCAATGGAGATTTATGTTGACGATGAGGCAAAGTTGACC
CTTCATGGACTTGTACAGCATTACATCAAATTGAGTGAAACGGAGAAAAACCGGAAGCTA
AATGATCTGCTGGATGCCTTGGACTTCAATCAAGTAGTTATATTTGTCAAGAGTGTGAAC
AGAGCAGCAGAGCTGAATAAATTACTAGCGGAGTGTAATTTTCCATCTATCTGCATCCAC
TCTGGCATGACTCAGGAAGAAAGATTGACTCGCTACAAATCTTTCAAGGAGGGTCATAAG
AGAATTCTCGTGGCAACTGATTTGGTTGGTAGGGGCATTGACATTGAAAGGGTCAACATT
GTTATTAACTATGACATGCCAGATTCTGCAGACACTTACCTTCACAGAGTGGGTAGAGCT
GGTAGGTTTGGAACGAAAGGCCTTGCCATTACATTTGTGTCCTCTGCATCAGATTCTGAA
GTTCTTAATCAGGTTCAGGAAAGGTTTGAAGTAGACATAAAAGAGCTTCCTGAGCAGATT
GATACTTCTACATACATGCCATCTTAG