Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400052674
CDS Infomation

pacid=37431682 polypeptide=PGSC0003DMP400035518 locus=PGSC0003DMG400020447 ID=PGSC0003DMT400052674.v4.03 annot-version=v4.03
Sequence

ATGGAAATTTTACCTGTGAAGACATCAAATTCTGATAGATACAAAATTGAAGCTAGAAAT
CTTTCCTACAAATTACCTCCTAAATATAATGAGTTTAAATGGATAGGCAAAAAGTTGGCT
AACAACAACAAAACTAGTACTTATATACTAAGGAATGTGAGTTGTGAAGCCAAACCAGGA
GAAATTACAGCAGTTGTTGGTCCAAGTGGCGCGGGAAAAACGACGTTGTTGGATATTCTA
GCAGGAAATGTTGGTCCATCATGTGTTTCTGGTCATGTTCTTGTTAATGATCAGCCTATG
AAGCCTGCAAATTTCAGGAGAATATCAGGCTATGTGACACAAGATGAGGCTTTATTCCCT
CTTCTCACTGTTGAAGAGACTTTGATGTATAGTGCGCGATTCAGGCTACGTGCAGGGGAT
GATAAGGCCAAAGACAGAGTGAAAAAGCTGTTGAATGAGCTTGGTTTGGACCATGTTGCT
GGTTTAAAAATTGGGAGAGAATCAAGCAGGACTATTTCAGGTGGTGAGAAGCGTAGAGTG
GCGATTGGAGTTGAATTAGTCCATGATCCTGCTGTTGTTTTGCTCGACGAACCAACTTCA
GGTCTTGATTCTGCTTCAGCTTTCCATGTAATGCATCTGTTAAAATCAATGGCTAAGAAT
CATGGTAAGACAATTGTACTTACCATCCATCAGCCTGGTTTTCGAATTCTTGAACTTTTC
GATAAAGCTGTGTTGCTGTCAAATGGCTTTGTCCTTCACAATGGATCTTTGCATCTTCTT
GAAGAGAAACTTAAGTCCACAGGACATTTCATTCCTCATCATGTCAATGTTCTTGAATTC
GCTATCGATATAACAGATAGCCTTGCAGAATGCCTGCATTCTGGAGATCAAAGTGACATT
GAAAAATGTGAAACAGAACAAGAAAGTGATAATGTGCTTAACAAAAACACCAATAAGGAA
GTTCTATACTCCAATTCTCCACTGAAAGAAGTACTAATTCTGAGCCAGAGATTCTGCAGG
AACATTTTCAGGACAAAACAACTTTTCTTGGCTAAGGTAATCCAAGCCTTACTTGTGGGG
CTAATTTTGGGATCAATATTTTTCAATGCCTATAACAACAACACCAAGAATTTGGAGCTG
CAATCTCAAGTTGGATTCTTTGCTTTTAGTCTCACATTCTTGCTGTCATCCAACACGGAA
GCTCTACCGATTTTCTTAGAAGAAAGGCGAATCCTAATGAGGGAAACATCTAGAGGAGCC
TACAGAATTTCCACCTACAATATAGCTAACACTATAGTATTCCTTCCTTTCCTTTTCATA
GTGGCTCTTCTCTATGCTATACCAGTATACTGGCTAGTAGGATTAAAGTACGAATTCAGT
TCATTCGCGTACTATACTCTGGTGTCCTGGATGATTTTCGCGATGGGGAATTCATTTGTG
GCAGCCTGTTCTGCACTAGTGCCAAATTTCCTCCTTGGAATGTCATTTATCGGTTGCCTA
ATAGGTGCATTTTTCCTTTTCTCAGGGTACTTTATATCGAAGGAGTCAATTCCTATATTC
TGGCTATTCGTGCACTATCTGAGTCTGTTTAAGTATCCATTCGAATGTTTCTTGATTAAT
GAGTATGGAGGAGAGAGTGGGAAACTGAAATGCATACAGAAAGTTGATGGAGTGTGTCTA
ATGTATGGTGAACAGTTGTTGACACGATACGGTCTGGAGGAGTCACAGAAGTGGTCTAAC
ATAGCTATTATGTTGAGTTTCATCTTTTGTTACAGGTTTTTATGTTTTCTGATTCTCTGG
TATAGATCTATCAGAAACAAATGTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400035518
PEP Infomation

pacid=37431682 transcript=PGSC0003DMT400052674 locus=PGSC0003DMG400020447 ID=PGSC0003DMT400052674.v4.03 annot-version=v4.03
Sequence

MEILPVKTSNSDRYKIEARNLSYKLPPKYNEFKWIGKKLANNNKTSTYILRNVSCEAKPG
EITAVVGPSGAGKTTLLDILAGNVGPSCVSGHVLVNDQPMKPANFRRISGYVTQDEALFP
LLTVEETLMYSARFRLRAGDDKAKDRVKKLLNELGLDHVAGLKIGRESSRTISGGEKRRV
AIGVELVHDPAVVLLDEPTSGLDSASAFHVMHLLKSMAKNHGKTIVLTIHQPGFRILELF
DKAVLLSNGFVLHNGSLHLLEEKLKSTGHFIPHHVNVLEFAIDITDSLAECLHSGDQSDI
EKCETEQESDNVLNKNTNKEVLYSNSPLKEVLILSQRFCRNIFRTKQLFLAKVIQALLVG
LILGSIFFNAYNNNTKNLELQSQVGFFAFSLTFLLSSNTEALPIFLEERRILMRETSRGA
YRISTYNIANTIVFLPFLFIVALLYAIPVYWLVGLKYEFSSFAYYTLVSWMIFAMGNSFV
AACSALVPNFLLGMSFIGCLIGAFFLFSGYFISKESIPIFWLFVHYLSLFKYPFECFLIN
EYGGESGKLKCIQKVDGVCLMYGEQLLTRYGLEESQKWSNIAIMLSFIFCYRFLCFLILW
YRSIRNKC*

Transcript Sequence

Transcript ID

PGSC0003DMT400052674
Transcript Infomation

pacid=37431682 locus=PGSC0003DMG400020447 ID=PGSC0003DMT400052674.v4.03 annot-version=v4.03
Sequence

ATGGAAATTTTACCTGTGAAGACATCAAATTCTGATAGATACAAAATTGAAGCTAGAAAT
CTTTCCTACAAATTACCTCCTAAATATAATGAGTTTAAATGGATAGGCAAAAAGTTGGCT
AACAACAACAAAACTAGTACTTATATACTAAGGAATGTGAGTTGTGAAGCCAAACCAGGA
GAAATTACAGCAGTTGTTGGTCCAAGTGGCGCGGGAAAAACGACGTTGTTGGATATTCTA
GCAGGAAATGTTGGTCCATCATGTGTTTCTGGTCATGTTCTTGTTAATGATCAGCCTATG
AAGCCTGCAAATTTCAGGAGAATATCAGGCTATGTGACACAAGATGAGGCTTTATTCCCT
CTTCTCACTGTTGAAGAGACTTTGATGTATAGTGCGCGATTCAGGCTACGTGCAGGGGAT
GATAAGGCCAAAGACAGAGTGAAAAAGCTGTTGAATGAGCTTGGTTTGGACCATGTTGCT
GGTTTAAAAATTGGGAGAGAATCAAGCAGGACTATTTCAGGTGGTGAGAAGCGTAGAGTG
GCGATTGGAGTTGAATTAGTCCATGATCCTGCTGTTGTTTTGCTCGACGAACCAACTTCA
GGTCTTGATTCTGCTTCAGCTTTCCATGTAATGCATCTGTTAAAATCAATGGCTAAGAAT
CATGGTAAGACAATTGTACTTACCATCCATCAGCCTGGTTTTCGAATTCTTGAACTTTTC
GATAAAGCTGTGTTGCTGTCAAATGGCTTTGTCCTTCACAATGGATCTTTGCATCTTCTT
GAAGAGAAACTTAAGTCCACAGGACATTTCATTCCTCATCATGTCAATGTTCTTGAATTC
GCTATCGATATAACAGATAGCCTTGCAGAATGCCTGCATTCTGGAGATCAAAGTGACATT
GAAAAATGTGAAACAGAACAAGAAAGTGATAATGTGCTTAACAAAAACACCAATAAGGAA
GTTCTATACTCCAATTCTCCACTGAAAGAAGTACTAATTCTGAGCCAGAGATTCTGCAGG
AACATTTTCAGGACAAAACAACTTTTCTTGGCTAAGGTAATCCAAGCCTTACTTGTGGGG
CTAATTTTGGGATCAATATTTTTCAATGCCTATAACAACAACACCAAGAATTTGGAGCTG
CAATCTCAAGTTGGATTCTTTGCTTTTAGTCTCACATTCTTGCTGTCATCCAACACGGAA
GCTCTACCGATTTTCTTAGAAGAAAGGCGAATCCTAATGAGGGAAACATCTAGAGGAGCC
TACAGAATTTCCACCTACAATATAGCTAACACTATAGTATTCCTTCCTTTCCTTTTCATA
GTGGCTCTTCTCTATGCTATACCAGTATACTGGCTAGTAGGATTAAAGTACGAATTCAGT
TCATTCGCGTACTATACTCTGGTGTCCTGGATGATTTTCGCGATGGGGAATTCATTTGTG
GCAGCCTGTTCTGCACTAGTGCCAAATTTCCTCCTTGGAATGTCATTTATCGGTTGCCTA
ATAGGTGCATTTTTCCTTTTCTCAGGGTACTTTATATCGAAGGAGTCAATTCCTATATTC
TGGCTATTCGTGCACTATCTGAGTCTGTTTAAGTATCCATTCGAATGTTTCTTGATTAAT
GAGTATGGAGGAGAGAGTGGGAAACTGAAATGCATACAGAAAGTTGATGGAGTGTGTCTA
ATGTATGGTGAACAGTTGTTGACACGATACGGTCTGGAGGAGTCACAGAAGTGGTCTAAC
ATAGCTATTATGTTGAGTTTCATCTTTTGTTACAGGTTTTTATGTTTTCTGATTCTCTGG
TATAGATCTATCAGAAACAAATGTTGA