Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400052673
CDS Infomation

pacid=37432486 polypeptide=PGSC0003DMP400035517 locus=PGSC0003DMG400020446 ID=PGSC0003DMT400052673.v4.03 annot-version=v4.03
Sequence

ATGGCGGCGGCGGCGGCGACTTCCTTCTCCATCACCACTTCCACTCCTCCTTCCTCCTCC
TCCTCAACCAAATCCCTAAAACCTTCTCTTGTTGGTAACTTAGGGTTTCTATCCTCGTCA
ACACCATCGCTTAAGCCTCTCAGAGCTCAAGCCGCCATTTCATCTGGCAGCTCAAACTCC
GGCGGCGGCGCGCTTGCGGCTCGCATGGTCGCCGCACCTGCTACCGTCAAAGCTCCTGCT
TCGTTTGATTTTGAAACATCCATTTTTAAGAAGGAGAAAGTAACCCTCGCTGGAAATGAT
GAGTACATTGTGAGGGGAGGGAGAGATTTGTTCAAGTATTTGCCTGATGCTTTTAAAGGA
ATCAAGCAGATTGGAGTTATCGGCTGGGGTTCTCAGGGACCTGCTCAAGCCCAGAACTTG
AGGGATTCTCTCGCAGAAATAAAATCTGACATAGTTGTTAAGATTGGTTTAAGGAAGGGT
TCAAGCTCATTTGCAGAGGCCCGCACAGCTGGGTTTACTGAAGAGAGTGGGACCCTTGGT
GACATATATGAGACTATCTCTGGCAGTGATCTAGTGCTGCTTTTGATTTCTGATGCTGCT
CAGGCTGATAATTATGAGAAAGTATTTTCTCACATGAAGCCAAACAGCATACTTGGGCTT
TCACATGGATTCCTCCTTGGCCATTTGCAGTCAATGGACCTTGACTTCCCAAAGAACATT
AGTGTGATTGCTGTATGTCCCAAGGGAATGGGTCCCTCAGTCAGGAGATTATATGTTCAA
GGAAAAGAAGTTAATGGTGCTGGAATTAATTCAAGTTTTGCAGTTCACCAGGATATTGAT
GGAAGAGCCACAGATGTTGCTCTAGGGTGGTCTGTTGCCCTTGGTTCTCCCTTTACTTTT
GCTACTACTCTAGAGCAGGAATATAAAAGTGACATTTTTGGAGAACGAGGCATTTTACTT
GGTGCTGTCCATGGAGTTGTGGAGTCACTTTTCAGAAGGTACACTGAGAACGGAATGAAT
GAGGAGCTTGCATACAAGAACACTGTAGAGTGCATAACAGGAGTCATTTCAAAGACCATA
TCAACAAAGGGCATGTTGGCTGTGTACAACTCATTGACTGAAGAGGGCAAGAGGGAGTTT
GAAGCTGCATACAGTGCTTCATTTTACCCATGCATGGAGATTTTGTATGAGTGCTATGAA
GATGTAGCTACAGGTAGCGAGATCAGGAGTGTTGTCTTGGCAGGCCGCCGCTTTTATGAA
AAGGAGGGCTTACCTGCCTTCCCAATGGGGAAAATTGACCAAACAAGGATGTGGAAGGTT
GGTGAGCGCGTTCGAGCAACCCGGCCAGCCGGTGATCTTGGTCCTCTGTATCCTTTCACT
GCTGGTGTCTTTGTGGCATTGATGATGGCCCAGATTGAGGTTCTGAGGAAGAAAGGTCAC
TCTTACTCCGAGATTATCAATGAAAGCGTCATCGAGTCTGTAGATTCTTTGAATCCGTTT
ATGCACGCTCGTGGAGTATCATTCATGGTTGACAATTGCTCTACAACAGCACGTTTAGGT
TCCAGGAAGTGGGCCCCTCGATTTGATTACAATCTCACCCAGCAAGCACTTGTAGCTGTG
GATAATAACGCCCCTATCAATCAAGATCTCATCAGCAACTTCCTTGCAGATCCTGTGCAT
GGAGCTATTAAAGTCTGTGCTGAACTGAGACCCACAGTTGATATTTCTGTAACAGCAGAT
GCTGATTTTGTCCGCCCCGAGCTCAGGCAATCTGGCAATTAA

Peptide Sequence

PEP ID

PGSC0003DMP400035517
PEP Infomation

pacid=37432486 transcript=PGSC0003DMT400052673 locus=PGSC0003DMG400020446 ID=PGSC0003DMT400052673.v4.03 annot-version=v4.03
Sequence

MAAAAATSFSITTSTPPSSSSSTKSLKPSLVGNLGFLSSSTPSLKPLRAQAAISSGSSNS
GGGALAARMVAAPATVKAPASFDFETSIFKKEKVTLAGNDEYIVRGGRDLFKYLPDAFKG
IKQIGVIGWGSQGPAQAQNLRDSLAEIKSDIVVKIGLRKGSSSFAEARTAGFTEESGTLG
DIYETISGSDLVLLLISDAAQADNYEKVFSHMKPNSILGLSHGFLLGHLQSMDLDFPKNI
SVIAVCPKGMGPSVRRLYVQGKEVNGAGINSSFAVHQDIDGRATDVALGWSVALGSPFTF
ATTLEQEYKSDIFGERGILLGAVHGVVESLFRRYTENGMNEELAYKNTVECITGVISKTI
STKGMLAVYNSLTEEGKREFEAAYSASFYPCMEILYECYEDVATGSEIRSVVLAGRRFYE
KEGLPAFPMGKIDQTRMWKVGERVRATRPAGDLGPLYPFTAGVFVALMMAQIEVLRKKGH
SYSEIINESVIESVDSLNPFMHARGVSFMVDNCSTTARLGSRKWAPRFDYNLTQQALVAV
DNNAPINQDLISNFLADPVHGAIKVCAELRPTVDISVTADADFVRPELRQSGN*

Transcript Sequence

Transcript ID

PGSC0003DMT400052673
Transcript Infomation

pacid=37432486 locus=PGSC0003DMG400020446 ID=PGSC0003DMT400052673.v4.03 annot-version=v4.03
Sequence

ATGGCGGCGGCGGCGGCGACTTCCTTCTCCATCACCACTTCCACTCCTCCTTCCTCCTCC
TCCTCAACCAAATCCCTAAAACCTTCTCTTGTTGGTAACTTAGGGTTTCTATCCTCGTCA
ACACCATCGCTTAAGCCTCTCAGAGCTCAAGCCGCCATTTCATCTGGCAGCTCAAACTCC
GGCGGCGGCGCGCTTGCGGCTCGCATGGTCGCCGCACCTGCTACCGTCAAAGCTCCTGCT
TCGTTTGATTTTGAAACATCCATTTTTAAGAAGGAGAAAGTAACCCTCGCTGGAAATGAT
GAGTACATTGTGAGGGGAGGGAGAGATTTGTTCAAGTATTTGCCTGATGCTTTTAAAGGA
ATCAAGCAGATTGGAGTTATCGGCTGGGGTTCTCAGGGACCTGCTCAAGCCCAGAACTTG
AGGGATTCTCTCGCAGAAATAAAATCTGACATAGTTGTTAAGATTGGTTTAAGGAAGGGT
TCAAGCTCATTTGCAGAGGCCCGCACAGCTGGGTTTACTGAAGAGAGTGGGACCCTTGGT
GACATATATGAGACTATCTCTGGCAGTGATCTAGTGCTGCTTTTGATTTCTGATGCTGCT
CAGGCTGATAATTATGAGAAAGTATTTTCTCACATGAAGCCAAACAGCATACTTGGGCTT
TCACATGGATTCCTCCTTGGCCATTTGCAGTCAATGGACCTTGACTTCCCAAAGAACATT
AGTGTGATTGCTGTATGTCCCAAGGGAATGGGTCCCTCAGTCAGGAGATTATATGTTCAA
GGAAAAGAAGTTAATGGTGCTGGAATTAATTCAAGTTTTGCAGTTCACCAGGATATTGAT
GGAAGAGCCACAGATGTTGCTCTAGGGTGGTCTGTTGCCCTTGGTTCTCCCTTTACTTTT
GCTACTACTCTAGAGCAGGAATATAAAAGTGACATTTTTGGAGAACGAGGCATTTTACTT
GGTGCTGTCCATGGAGTTGTGGAGTCACTTTTCAGAAGGTACACTGAGAACGGAATGAAT
GAGGAGCTTGCATACAAGAACACTGTAGAGTGCATAACAGGAGTCATTTCAAAGACCATA
TCAACAAAGGGCATGTTGGCTGTGTACAACTCATTGACTGAAGAGGGCAAGAGGGAGTTT
GAAGCTGCATACAGTGCTTCATTTTACCCATGCATGGAGATTTTGTATGAGTGCTATGAA
GATGTAGCTACAGGTAGCGAGATCAGGAGTGTTGTCTTGGCAGGCCGCCGCTTTTATGAA
AAGGAGGGCTTACCTGCCTTCCCAATGGGGAAAATTGACCAAACAAGGATGTGGAAGGTT
GGTGAGCGCGTTCGAGCAACCCGGCCAGCCGGTGATCTTGGTCCTCTGTATCCTTTCACT
GCTGGTGTCTTTGTGGCATTGATGATGGCCCAGATTGAGGTTCTGAGGAAGAAAGGTCAC
TCTTACTCCGAGATTATCAATGAAAGCGTCATCGAGTCTGTAGATTCTTTGAATCCGTTT
ATGCACGCTCGTGGAGTATCATTCATGGTTGACAATTGCTCTACAACAGCACGTTTAGGT
TCCAGGAAGTGGGCCCCTCGATTTGATTACAATCTCACCCAGCAAGCACTTGTAGCTGTG
GATAATAACGCCCCTATCAATCAAGATCTCATCAGCAACTTCCTTGCAGATCCTGTGCAT
GGAGCTATTAAAGTCTGTGCTGAACTGAGACCCACAGTTGATATTTCTGTAACAGCAGAT
GCTGATTTTGTCCGCCCCGAGCTCAGGCAATCTGGCAATTAA