Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400052631
CDS Infomation

pacid=37432098 polypeptide=PGSC0003DMP400035487 locus=PGSC0003DMG400020429 ID=PGSC0003DMT400052631.v4.03 annot-version=v4.03
Sequence

ATGGACTTGAAATCTATATCATGGGTTGGAAACATATACCAAAAATTTGAAACTATGTGT
TTGGAGATGGAAGAGGCTATGTACCAGGACACTGTTAAATATGTTGAGAATCAGGTGAAC
ACTGTTGGTACAAATGTCAAGAGATTCTGTTCTGAGGTGATGCAAGATGTTCATCCTCAA
TGTAATATTGATCCTGTGAAAGTCGCAGCTGCTGACTTGTCTATTAACCCTTATGCTCAC
TATGAAATTGACAAGAAGTTGAAAGCAAATCTTAAAGGAAGTGCCAGACGTTTTAGTAAC
AAATTAAATGATGACACTCAAGTGATCAAGGGGAAGAGCAAAAGTGGAGGAGTCTATAAA
CGTCAAAATGTGGGAATCAAAGAAATTGTTAGAGACAGCCACCCAGCTAAGAAGCCTAAT
GCTATTTGTCTTGCATCAGGGGATGCACTAAAATTATCTTCAAGTGCTGAGGTTAGGGGT
GGTTTTGAAATGGCATCTGATCATGTGACCCTGACTTCAGCTCTGGCCTCAGTTAAAGGA
TCTGACTCTGGAGAAGCAGCAAGTAAAGTTCGCGATCACTTTATACAAACTAATGTGTCT
GCAGCTGATACTTCAATTACTTCTGAGGCTTCTGTTACGATGTCTGTTGAATCTGTCAGG
AAGAAACAAACAGATACTTGTACAAAGGAGTTAGCATGTAATACAAGATACAAAATTAGC
AGTAATGTTCGGAACAATTTAGCTAATGAGGAGATCAATGAGTCCCATGAAGAAAAGTCA
GATAATTTGTCTTCTGATATGTCCAAGTATGACAGCACTGAGTCAGATTTGGAAATTGTT
GAGAAATTTGATGAATCCCAGTTGGATGAAACATGTGTCCTGGTTGAAGAGGACAGGATT
CATGTTCCACATGGTCCTGTCAAAAAGAAGTCCTATAAGAATAAGCTTCGGGAAGCTTTC
TCCACGAAAAAGAGGTTGACAAGGAAAGAGTATGAACAACTTGGAGCACTATATGGTGAT
CAACAATTCAACCTAGAGGCTGAGGACAAGGTGATGCCTGTTCTTGCCATGAATTCAAAC
ACAAAAATGTTGTCTGCTAATGATCATCCTGAATCTGAGTGGGAGATTTTATAG

Peptide Sequence

PEP ID

PGSC0003DMP400035487
PEP Infomation

pacid=37432098 transcript=PGSC0003DMT400052631 locus=PGSC0003DMG400020429 ID=PGSC0003DMT400052631.v4.03 annot-version=v4.03
Sequence

MDLKSISWVGNIYQKFETMCLEMEEAMYQDTVKYVENQVNTVGTNVKRFCSEVMQDVHPQ
CNIDPVKVAAADLSINPYAHYEIDKKLKANLKGSARRFSNKLNDDTQVIKGKSKSGGVYK
RQNVGIKEIVRDSHPAKKPNAICLASGDALKLSSSAEVRGGFEMASDHVTLTSALASVKG
SDSGEAASKVRDHFIQTNVSAADTSITSEASVTMSVESVRKKQTDTCTKELACNTRYKIS
SNVRNNLANEEINESHEEKSDNLSSDMSKYDSTESDLEIVEKFDESQLDETCVLVEEDRI
HVPHGPVKKKSYKNKLREAFSTKKRLTRKEYEQLGALYGDQQFNLEAEDKVMPVLAMNSN
TKMLSANDHPESEWEIL*

Transcript Sequence

Transcript ID

PGSC0003DMT400052631
Transcript Infomation

pacid=37432098 locus=PGSC0003DMG400020429 ID=PGSC0003DMT400052631.v4.03 annot-version=v4.03
Sequence

ATGGACTTGAAATCTATATCATGGGTTGGAAACATATACCAAAAATTTGAAACTATGTGT
TTGGAGATGGAAGAGGCTATGTACCAGGACACTGTTAAATATGTTGAGAATCAGGTGAAC
ACTGTTGGTACAAATGTCAAGAGATTCTGTTCTGAGGTGATGCAAGATGTTCATCCTCAA
TGTAATATTGATCCTGTGAAAGTCGCAGCTGCTGACTTGTCTATTAACCCTTATGCTCAC
TATGAAATTGACAAGAAGTTGAAAGCAAATCTTAAAGGAAGTGCCAGACGTTTTAGTAAC
AAATTAAATGATGACACTCAAGTGATCAAGGGGAAGAGCAAAAGTGGAGGAGTCTATAAA
CGTCAAAATGTGGGAATCAAAGAAATTGTTAGAGACAGCCACCCAGCTAAGAAGCCTAAT
GCTATTTGTCTTGCATCAGGGGATGCACTAAAATTATCTTCAAGTGCTGAGGTTAGGGGT
GGTTTTGAAATGGCATCTGATCATGTGACCCTGACTTCAGCTCTGGCCTCAGTTAAAGGA
TCTGACTCTGGAGAAGCAGCAAGTAAAGTTCGCGATCACTTTATACAAACTAATGTGTCT
GCAGCTGATACTTCAATTACTTCTGAGGCTTCTGTTACGATGTCTGTTGAATCTGTCAGG
AAGAAACAAACAGATACTTGTACAAAGGAGTTAGCATGTAATACAAGATACAAAATTAGC
AGTAATGTTCGGAACAATTTAGCTAATGAGGAGATCAATGAGTCCCATGAAGAAAAGTCA
GATAATTTGTCTTCTGATATGTCCAAGTATGACAGCACTGAGTCAGATTTGGAAATTGTT
GAGAAATTTGATGAATCCCAGTTGGATGAAACATGTGTCCTGGTTGAAGAGGACAGGATT
CATGTTCCACATGGTCCTGTCAAAAAGAAGTCCTATAAGAATAAGCTTCGGGAAGCTTTC
TCCACGAAAAAGAGGTTGACAAGGAAAGAGTATGAACAACTTGGAGCACTATATGGTGAT
CAACAATTCAACCTAGAGGCTGAGGACAAGGTGATGCCTGTTCTTGCCATGAATTCAAAC
ACAAAAATGTTGTCTGCTAATGATCATCCTGAATCTGAGTGGGAGATTTTATAG