Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400052621
CDS Infomation

pacid=37432128 polypeptide=PGSC0003DMP400035478 locus=PGSC0003DMG400020426 ID=PGSC0003DMT400052621.v4.03 annot-version=v4.03
Sequence

ATGGGGGATCTTCATTCTGCAGAAGAACATGGAAATACTCAAATTTCAACTGTCATTTTT
GATTTGGATGGTACCCTTTTGAGTACAGAGCACTTGACAAAGGAAATTCTGAAGGAATTT
CTGGCTGGATATGGGAAGGTGCCAGATAAGGAGAAGGAAAAGAAAAGATTGGGCATGGCC
CAGAAAGAGTACGCTATTGGCATTGTCAGTGATTACGACCTCCCTATCACGCCCGATCAG
TATGTCCAAGCAGTCATGCCCTTTTATCATGACTTGTGGTTGCAAGCGAAAGCACTTCCT
GGTGCTAATCGCCTTATAAGACATCTCCATAAGCATGGAGTTCCCTTTGCCCTTGCTTCA
AATTCCAAAAGGAAAAACATAGATGGGAAAGTCTCTCTCCAAGAAGGTTGGAAAGAATGT
TTTTCCGTAATTCTTGGAAGTGATCAGGTTAAATCAGGGAAGCCTTCTCCAGACATATTT
CTTGAAGCTGCAAAACAAATGGGTGCAGATGCAGCTCACTGCCTAGTGATAGAGGATTCT
GTTATCGGAGTCAGGGCAGGCAAGGCTGCTGGAATGAAGGTGGTAGCTGTGCCATCTTTC
CATTCTGAATTTGATCAATATACAATAGCTGATTCTGTGCTTCGTTCACTCCTAGATTTA
AAGCCGGAAGTATGGGGTCTCCCACCATTTGAAGACTGGGTTGATAATGCGTTGCTGGTT
GAACCTGTTCATTTCAGGGGTCTGTACAAAAATGGCCTCCTCCATGATTTTGCAGATGAT
GGGCCGTCTACTCTACCCGATCAAGTGTTTGGAGTTTATTTTGGCTGGGCAAAACCTGAG
GCTTACAAGTTCATAAAGATTGTTCTTGGCAATGGTTGGGGACATGGCTGCTGCAGTTCT
AAGAGGAAGATGCAAGCTTGTATAGTTGATTCAAGTGACGAACAGATCCAGCCTGGCAAA
ATGGAAGTTGTGATTGTAGGTTACATCAGAGGATCACACGATGAGGGAAAATCGGGCAAA
ATAGAAATACTTGAGGAAGACAAGTCCATTGCCAATGCTGCCTTGAATCTGTCTGAATTC
TCCCTAGGTACATTCAAGTCTCTCTTCTCTGAAGTTGCTGTACAAGATGAGTGCGACCTT
AACGTAAAATGA

Peptide Sequence

PEP ID

PGSC0003DMP400035478
PEP Infomation

pacid=37432128 transcript=PGSC0003DMT400052621 locus=PGSC0003DMG400020426 ID=PGSC0003DMT400052621.v4.03 annot-version=v4.03
Sequence

MGDLHSAEEHGNTQISTVIFDLDGTLLSTEHLTKEILKEFLAGYGKVPDKEKEKKRLGMA
QKEYAIGIVSDYDLPITPDQYVQAVMPFYHDLWLQAKALPGANRLIRHLHKHGVPFALAS
NSKRKNIDGKVSLQEGWKECFSVILGSDQVKSGKPSPDIFLEAAKQMGADAAHCLVIEDS
VIGVRAGKAAGMKVVAVPSFHSEFDQYTIADSVLRSLLDLKPEVWGLPPFEDWVDNALLV
EPVHFRGLYKNGLLHDFADDGPSTLPDQVFGVYFGWAKPEAYKFIKIVLGNGWGHGCCSS
KRKMQACIVDSSDEQIQPGKMEVVIVGYIRGSHDEGKSGKIEILEEDKSIANAALNLSEF
SLGTFKSLFSEVAVQDECDLNVK*

Transcript Sequence

Transcript ID

PGSC0003DMT400052621
Transcript Infomation

pacid=37432128 locus=PGSC0003DMG400020426 ID=PGSC0003DMT400052621.v4.03 annot-version=v4.03
Sequence

ATGGGGGATCTTCATTCTGCAGAAGAACATGGAAATACTCAAATTTCAACTGTCATTTTT
GATTTGGATGGTACCCTTTTGAGTACAGAGCACTTGACAAAGGAAATTCTGAAGGAATTT
CTGGCTGGATATGGGAAGGTGCCAGATAAGGAGAAGGAAAAGAAAAGATTGGGCATGGCC
CAGAAAGAGTACGCTATTGGCATTGTCAGTGATTACGACCTCCCTATCACGCCCGATCAG
TATGTCCAAGCAGTCATGCCCTTTTATCATGACTTGTGGTTGCAAGCGAAAGCACTTCCT
GGTGCTAATCGCCTTATAAGACATCTCCATAAGCATGGAGTTCCCTTTGCCCTTGCTTCA
AATTCCAAAAGGAAAAACATAGATGGGAAAGTCTCTCTCCAAGAAGGTTGGAAAGAATGT
TTTTCCGTAATTCTTGGAAGTGATCAGGTTAAATCAGGGAAGCCTTCTCCAGACATATTT
CTTGAAGCTGCAAAACAAATGGGTGCAGATGCAGCTCACTGCCTAGTGATAGAGGATTCT
GTTATCGGAGTCAGGGCAGGCAAGGCTGCTGGAATGAAGGTGGTAGCTGTGCCATCTTTC
CATTCTGAATTTGATCAATATACAATAGCTGATTCTGTGCTTCGTTCACTCCTAGATTTA
AAGCCGGAAGTATGGGGTCTCCCACCATTTGAAGACTGGGTTGATAATGCGTTGCTGGTT
GAACCTGTTCATTTCAGGGGTCTGTACAAAAATGGCCTCCTCCATGATTTTGCAGATGAT
GGGCCGTCTACTCTACCCGATCAAGTGTTTGGAGTTTATTTTGGCTGGGCAAAACCTGAG
GCTTACAAGTTCATAAAGATTGTTCTTGGCAATGGTTGGGGACATGGCTGCTGCAGTTCT
AAGAGGAAGATGCAAGCTTGTATAGTTGATTCAAGTGACGAACAGATCCAGCCTGGCAAA
ATGGAAGTTGTGATTGTAGGTTACATCAGAGGATCACACGATGAGGGAAAATCGGGCAAA
ATAGAAATACTTGAGGAAGACAAGTCCATTGCCAATGCTGCCTTGAATCTGTCTGAATTC
TCCCTAGGTACATTCAAGTCTCTCTTCTCTGAAGTTGCTGTACAAGATGAGTGCGACCTT
AACGTAAAATGA