Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400052619
CDS Infomation

pacid=37431348 polypeptide=PGSC0003DMP400035476 locus=PGSC0003DMG400020425 ID=PGSC0003DMT400052619.v4.03 annot-version=v4.03
Sequence

ATGGCTTCTTCCAAAGAACGTGAGAACTTCGTCTACGTCGCTAAGCTCGCTGAGCAAGCC
GAACGCTACGATGAAATGGTTGAAGCAATGAAGAATGTCGCAAACATGGATGTTGAATTG
ACTGTGGAGGAAAGGAATCTTCTTTCTGTTGGTTATAAGAATGTGGTAGGTTCTAGGAGA
GCATCTTGGAGGATCTTGTCCTCTATTGAGCAGAAGGAAGAATCTAGAGGAAATGAGCAA
AATGTCAAGCGAATCAAGGAGTACCTGCAAAAGGTGGAGTCGGAGCTCACCAACATTTGC
AATGATATTATGGTGGTCATTGATCAGCATCTAATTCCGTCATGCTCTGCAGGCGAATCA
ACTGTGTTTTACCACAAGATGAAGGGGGACTATTATCGTTATCTTGCAGAATTTAAAGCT
GGCAATGACAAGAAGGAGGTTGCAGAGCTTTCATTGAAAGCATATCAGTCAGCTACAACT
GCTGCGGAGGCGGAATTACCACCCACTCATCCCATTCGTCTGGGACTGGCTTTGAATTTC
TCTGTTTTCTACTATGAGATCATGAATTCACCTGAAAGGGCATGCCATCTGGCAAAACAG
GCCTTCGATGAAGCAATATCTGAGCTGGACAGCCTGAATGAGGATTCCTACAAAGACAGC
ACCTTGATTATGCAGCTTCTAAGGGACAACCTCACCTTGTGGACTTCTGATCTTCCAGAG
GATGCTGAAGATGCCCAAAAGGGAGATGCCACAAACAAAGCTGGTGGAGGTGAAGATGCA
GAGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400035476
PEP Infomation

pacid=37431348 transcript=PGSC0003DMT400052619 locus=PGSC0003DMG400020425 ID=PGSC0003DMT400052619.v4.03 annot-version=v4.03
Sequence

MASSKERENFVYVAKLAEQAERYDEMVEAMKNVANMDVELTVEERNLLSVGYKNVVGSRR
ASWRILSSIEQKEESRGNEQNVKRIKEYLQKVESELTNICNDIMVVIDQHLIPSCSAGES
TVFYHKMKGDYYRYLAEFKAGNDKKEVAELSLKAYQSATTAAEAELPPTHPIRLGLALNF
SVFYYEIMNSPERACHLAKQAFDEAISELDSLNEDSYKDSTLIMQLLRDNLTLWTSDLPE
DAEDAQKGDATNKAGGGEDAE*

Transcript Sequence

Transcript ID

PGSC0003DMT400052619
Transcript Infomation

pacid=37431348 locus=PGSC0003DMG400020425 ID=PGSC0003DMT400052619.v4.03 annot-version=v4.03
Sequence

ATGGCTTCTTCCAAAGAACGTGAGAACTTCGTCTACGTCGCTAAGCTCGCTGAGCAAGCC
GAACGCTACGATGAAATGGTTGAAGCAATGAAGAATGTCGCAAACATGGATGTTGAATTG
ACTGTGGAGGAAAGGAATCTTCTTTCTGTTGGTTATAAGAATGTGGTAGGTTCTAGGAGA
GCATCTTGGAGGATCTTGTCCTCTATTGAGCAGAAGGAAGAATCTAGAGGAAATGAGCAA
AATGTCAAGCGAATCAAGGAGTACCTGCAAAAGGTGGAGTCGGAGCTCACCAACATTTGC
AATGATATTATGGTGGTCATTGATCAGCATCTAATTCCGTCATGCTCTGCAGGCGAATCA
ACTGTGTTTTACCACAAGATGAAGGGGGACTATTATCGTTATCTTGCAGAATTTAAAGCT
GGCAATGACAAGAAGGAGGTTGCAGAGCTTTCATTGAAAGCATATCAGTCAGCTACAACT
GCTGCGGAGGCGGAATTACCACCCACTCATCCCATTCGTCTGGGACTGGCTTTGAATTTC
TCTGTTTTCTACTATGAGATCATGAATTCACCTGAAAGGGCATGCCATCTGGCAAAACAG
GCCTTCGATGAAGCAATATCTGAGCTGGACAGCCTGAATGAGGATTCCTACAAAGACAGC
ACCTTGATTATGCAGCTTCTAAGGGACAACCTCACCTTGTGGACTTCTGATCTTCCAGAG
GATGCTGAAGATGCCCAAAAGGGAGATGCCACAAACAAAGCTGGTGGAGGTGAAGATGCA
GAGTGA