Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400052600
CDS Infomation

pacid=37431102 polypeptide=PGSC0003DMP400035461 locus=PGSC0003DMG400020418 ID=PGSC0003DMT400052600.v4.03 annot-version=v4.03
Sequence

ATGCCAGCTGTACAAAAGCTTTATAACGCTTGTAAAGCATCACTTTCACCTAACGGACCG
GTTTCCGAAGACGCTCTTGAGAAAGTTCGTTCCCTATTGGATAAAATCAAGCCCTCTGAT
GTAGGTCTTGAGCAAGAAGCACAACTTGTACGGAGTTGGAATAGTACTCTGCACGAGCGC
AATGGGGGACTGCAGCCACCGCCACCGCCACCAATCAAATACCTGCACTTACATGAATGT
GACAGCTTCTCTATGGGGATATTTTGCATGCCACCTTCCTCTATCATACCTCTACACAAT
CACCCTGGAATGACAGTTTTAAGTAAGCTGGTATATGGTTCCTTTCATGTGAAAGCCTAT
GATTGGATCAATATTCCAGGTCCTTTGGTTCCATTGGAAGGTGCAAGACCGGCAAAGCTT
GTTAAAGACTGTGACATGACTGCTCCGTGTGGGACAACTGCTCTGTATCCTACTTCTGGA
GGCAACATCCATTGTTTCAAAGCCATAACTCCTTGTGCTATTTTTGACATCCTTTCTCCA
CCCTACTCTTCTGAGGATGGACGGCATTGCACTTATTTCCGGAGGTCTCCAGTAGTGGAT
CTACCAGGTGAACTCGAGGTGGATGGAGTGACATCCTCCGACATGACTTGGTTGGAAGAG
TTTCAACTTCCCGATGACTTTGTGATCCGTAGAGGGCAATACAAAGGCCGTGTCATCAAA
ACTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400035461
PEP Infomation

pacid=37431102 transcript=PGSC0003DMT400052600 locus=PGSC0003DMG400020418 ID=PGSC0003DMT400052600.v4.03 annot-version=v4.03
Sequence

MPAVQKLYNACKASLSPNGPVSEDALEKVRSLLDKIKPSDVGLEQEAQLVRSWNSTLHER
NGGLQPPPPPPIKYLHLHECDSFSMGIFCMPPSSIIPLHNHPGMTVLSKLVYGSFHVKAY
DWINIPGPLVPLEGARPAKLVKDCDMTAPCGTTALYPTSGGNIHCFKAITPCAIFDILSP
PYSSEDGRHCTYFRRSPVVDLPGELEVDGVTSSDMTWLEEFQLPDDFVIRRGQYKGRVIK
T*

Transcript Sequence

Transcript ID

PGSC0003DMT400052600
Transcript Infomation

pacid=37431102 locus=PGSC0003DMG400020418 ID=PGSC0003DMT400052600.v4.03 annot-version=v4.03
Sequence

ATGCCAGCTGTACAAAAGCTTTATAACGCTTGTAAAGCATCACTTTCACCTAACGGACCG
GTTTCCGAAGACGCTCTTGAGAAAGTTCGTTCCCTATTGGATAAAATCAAGCCCTCTGAT
GTAGGTCTTGAGCAAGAAGCACAACTTGTACGGAGTTGGAATAGTACTCTGCACGAGCGC
AATGGGGGACTGCAGCCACCGCCACCGCCACCAATCAAATACCTGCACTTACATGAATGT
GACAGCTTCTCTATGGGGATATTTTGCATGCCACCTTCCTCTATCATACCTCTACACAAT
CACCCTGGAATGACAGTTTTAAGTAAGCTGGTATATGGTTCCTTTCATGTGAAAGCCTAT
GATTGGATCAATATTCCAGGTCCTTTGGTTCCATTGGAAGGTGCAAGACCGGCAAAGCTT
GTTAAAGACTGTGACATGACTGCTCCGTGTGGGACAACTGCTCTGTATCCTACTTCTGGA
GGCAACATCCATTGTTTCAAAGCCATAACTCCTTGTGCTATTTTTGACATCCTTTCTCCA
CCCTACTCTTCTGAGGATGGACGGCATTGCACTTATTTCCGGAGGTCTCCAGTAGTGGAT
CTACCAGGTGAACTCGAGGTGGATGGAGTGACATCCTCCGACATGACTTGGTTGGAAGAG
TTTCAACTTCCCGATGACTTTGTGATCCGTAGAGGGCAATACAAAGGCCGTGTCATCAAA
ACTTGA