Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400052598
CDS Infomation

pacid=37431974 polypeptide=PGSC0003DMP400035459 locus=PGSC0003DMG400020417 ID=PGSC0003DMT400052598.v4.03 annot-version=v4.03
Sequence

ATGGGGACAGAACCAACATGGCATGAATTACTAGGAAGCAACAACTGGGAAGGTCTTCTT
GAACCATTACACCTCAATCTCCGGCGACTCATTCTCCGGTGCGGCGACTTTTGTCAAGCA
ACTCACGACGCCTTCAACAATGATGAATACTCCATGTACTGTGGCAGTAGTCGATACGGC
AAAAGTTCATTTTTCCACAAAGTCATGTTCAAATCTGCCTCAGATTACCAAATCGTCAGC
TTCCTTTACGCCACTGCTCGTGTTGGTGCCCATAAAGCCTTTTTCCTCCACTCTCTTTCT
CGTGAATCATGGGATCGTGAATCCAATTGGATCGGGTATATAGCTGTAACCAACGACGAA
ATGAGCGAACAATTGGGTCGTCGGGAAATCTACATAGCGTTTCGTGGAACAACGAGGAAT
TACGAATGGGTCAATGTTCTTAGTGCTCTACCCGAATCAGCTGAACCTCTACTTCATCCC
CAATCGTTGAATAAACCTGACCCAGATGGCGATAATGGCGGAAGTAACAGTAATGATGAC
GAAAATGCCCCTAGAGTAATGAATGGATGGTTGAAGATTTACATATCCAGTGACCCAAAA
TCACCATATACGAGATTAAGTGCTAGAGCACAGCTTCAAACAATGATTGAAGATCTAAGA
GATCGGTATAAAGACGAGAATCTGAGTATAACTTTTACTGGGCACAGTTTAGGTGCAACT
TTATCAATTTTAGCAGCTTTTGATCTTGTTGAAAATGGGGTAACTGATATTCCGGTATCC
GCCATTATTTTCGGTAGTCCACAGGTAGGAAACAGAGCATTCAACGATAAGCTGAAAGAA
TTCCCAAATCTGAAAATCCTCCATGTTAAGAACAAAATTGATGTGATACCTCTTTATCCA
AGTTCTTTATTAGGGTATGTTAATTCAGGGATTGAGCTAGTGATCGACACCAGAAAATCG
CCAAGTTTGAAGGACTCAAAAAATCCAAGTGACTGGCATAATTTGCAGGCGATGTTGCAT
ATAATAGCTGGTTGGAATGGGGAAAATGGAGAATTTGAGATGAAAGTGAAGAGAAGCTTG
GCTTTAGTGAACAAATCAAGTTCAATATTGAAAGATGACATATTGATTCCAGGATCATGG
TGGGTTGAAAAGAATAAAGGAGTTGTTCTTGATGAAGATGGAGAATGGATTCTTGCACCA
CCATTAGATGAGGACATTCCAATCCCTGAGGTTTATTCACTGGAAAATGAAGCCATAAGT
AAATTACTGGAAGATGGAATAACACAAATTCATGAAGATGGAATTGAGGAAGAGGAGTAC
AAGCACATTGCTATTCTGAAAGAGAGTCGTTTACTCATCCACAGAACAAAAGCAGTATTA
AAACAGAGTTATAAAGAAGGGCATTTTGTGTTTAGACAGTTAGGCAAACATGGAGACAGG
GGCGGCTCAACGTACTTGGAGGCCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400035459
PEP Infomation

pacid=37431974 transcript=PGSC0003DMT400052598 locus=PGSC0003DMG400020417 ID=PGSC0003DMT400052598.v4.03 annot-version=v4.03
Sequence

MGTEPTWHELLGSNNWEGLLEPLHLNLRRLILRCGDFCQATHDAFNNDEYSMYCGSSRYG
KSSFFHKVMFKSASDYQIVSFLYATARVGAHKAFFLHSLSRESWDRESNWIGYIAVTNDE
MSEQLGRREIYIAFRGTTRNYEWVNVLSALPESAEPLLHPQSLNKPDPDGDNGGSNSNDD
ENAPRVMNGWLKIYISSDPKSPYTRLSARAQLQTMIEDLRDRYKDENLSITFTGHSLGAT
LSILAAFDLVENGVTDIPVSAIIFGSPQVGNRAFNDKLKEFPNLKILHVKNKIDVIPLYP
SSLLGYVNSGIELVIDTRKSPSLKDSKNPSDWHNLQAMLHIIAGWNGENGEFEMKVKRSL
ALVNKSSSILKDDILIPGSWWVEKNKGVVLDEDGEWILAPPLDEDIPIPEVYSLENEAIS
KLLEDGITQIHEDGIEEEEYKHIAILKESRLLIHRTKAVLKQSYKEGHFVFRQLGKHGDR
GGSTYLEA*

Transcript Sequence

Transcript ID

PGSC0003DMT400052598
Transcript Infomation

pacid=37431974 locus=PGSC0003DMG400020417 ID=PGSC0003DMT400052598.v4.03 annot-version=v4.03
Sequence

ATGGGGACAGAACCAACATGGCATGAATTACTAGGAAGCAACAACTGGGAAGGTCTTCTT
GAACCATTACACCTCAATCTCCGGCGACTCATTCTCCGGTGCGGCGACTTTTGTCAAGCA
ACTCACGACGCCTTCAACAATGATGAATACTCCATGTACTGTGGCAGTAGTCGATACGGC
AAAAGTTCATTTTTCCACAAAGTCATGTTCAAATCTGCCTCAGATTACCAAATCGTCAGC
TTCCTTTACGCCACTGCTCGTGTTGGTGCCCATAAAGCCTTTTTCCTCCACTCTCTTTCT
CGTGAATCATGGGATCGTGAATCCAATTGGATCGGGTATATAGCTGTAACCAACGACGAA
ATGAGCGAACAATTGGGTCGTCGGGAAATCTACATAGCGTTTCGTGGAACAACGAGGAAT
TACGAATGGGTCAATGTTCTTAGTGCTCTACCCGAATCAGCTGAACCTCTACTTCATCCC
CAATCGTTGAATAAACCTGACCCAGATGGCGATAATGGCGGAAGTAACAGTAATGATGAC
GAAAATGCCCCTAGAGTAATGAATGGATGGTTGAAGATTTACATATCCAGTGACCCAAAA
TCACCATATACGAGATTAAGTGCTAGAGCACAGCTTCAAACAATGATTGAAGATCTAAGA
GATCGGTATAAAGACGAGAATCTGAGTATAACTTTTACTGGGCACAGTTTAGGTGCAACT
TTATCAATTTTAGCAGCTTTTGATCTTGTTGAAAATGGGGTAACTGATATTCCGGTATCC
GCCATTATTTTCGGTAGTCCACAGGTAGGAAACAGAGCATTCAACGATAAGCTGAAAGAA
TTCCCAAATCTGAAAATCCTCCATGTTAAGAACAAAATTGATGTGATACCTCTTTATCCA
AGTTCTTTATTAGGGTATGTTAATTCAGGGATTGAGCTAGTGATCGACACCAGAAAATCG
CCAAGTTTGAAGGACTCAAAAAATCCAAGTGACTGGCATAATTTGCAGGCGATGTTGCAT
ATAATAGCTGGTTGGAATGGGGAAAATGGAGAATTTGAGATGAAAGTGAAGAGAAGCTTG
GCTTTAGTGAACAAATCAAGTTCAATATTGAAAGATGACATATTGATTCCAGGATCATGG
TGGGTTGAAAAGAATAAAGGAGTTGTTCTTGATGAAGATGGAGAATGGATTCTTGCACCA
CCATTAGATGAGGACATTCCAATCCCTGAGGTTTATTCACTGGAAAATGAAGCCATAAGT
AAATTACTGGAAGATGGAATAACACAAATTCATGAAGATGGAATTGAGGAAGAGGAGTAC
AAGCACATTGCTATTCTGAAAGAGAGTCGTTTACTCATCCACAGAACAAAAGCAGTATTA
AAACAGAGTTATAAAGAAGGGCATTTTGTGTTTAGACAGTTAGGCAAACATGGAGACAGG
GGCGGCTCAACGTACTTGGAGGCCTAA