Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400052568
CDS Infomation

pacid=37445864 polypeptide=PGSC0003DMP400035438 locus=PGSC0003DMG400020397 ID=PGSC0003DMT400052568.v4.03 annot-version=v4.03
Sequence

ATGGAGAAGCAGATTAGCTTTCATGGGGTGATTGAGAAACAGCAGAGTTTTCGAAATGGG
ACGATGGAGAAGCAGAAGAGCTTTAGAGGGTTGATGGAAAAGCAGAAAAGTTTTCGGATA
GCGATGGAGAGGCAGCTGAGCTTTGGTGGTGGTGAGAGGAAAAGGGGTAAGGAATCACCA
GGGAAAAGAGGGGATTCCCCACTTCACTTGGCAGTTAGAGCAGGGAACCTTGGCAAGGTG
AAAGAAATCGTTCATAGCAAAAGCACCAATGATTTGTTATCTAAGCAAAACCAGGAGGGT
GAGACAGTTCTGTATGTTGCGGCAGAGAATGGCCATAGTTTGGTTGTTGCAGAGTTGTTA
AAACATTTAGACCTTCAGACAGCTTCTATTCTGGCAAATAATGGTTTTGATGCATTCCAT
ATTGCCGCAAAGCAGGGTCATCTTGAGGTACTGAAAGAACTGTTGCATTCATTTCCAAAC
CTAGTCATGACAACGGATTCAGCCAACTCTACAGCCTTACATACAGCAGCTGCTCAGGGA
CACCTTGATGTAGTAAATCTCCTTCTGGAGATCGATTCAAACCTTGCTAAGATAGCTCGT
AACAATGGCAAGACTATTCTCCATACAGCTGCAAGAATGGGGCACTTGGAAATAGTTAGA
GCTCTTCTAAGCAAGGATCCTGAGATTGGCTTTAGAACAGATACAAAAGGCCAAAGTGCC
TTGCACATGGCTGTAAAGGGACAAAATTTTGATATTGTTCTTGAATTAATCAAGCCAAAT
CCTGCTGTATTGGCTTTGGAAGATAACAAAGGAAACAGAGCACTTCATGTTGCGACTACA
AAGGGGCGGCCACAGATGGTACAATGTCTAATATCAATTGAGGGCATCGATCTCAATGCC
GTCAACAGGGCTGGAGAAACAGCTCTTGATATTGCAGAAAAGTCTGGATCTCCGCAGCTC
GTCTCCATGTTGAAGGAGGCAGGAGCTACCCGTTCTAAAGATGATGGGAGGCCTCCAACT
GCTGCAAAGCAGCTCAAGCAGACTGTCAGTGACATACGACATGATGTGGAGTCCCAACTC
CAACACAGTCGTCAAACTGGCTTCAGAGTGCGGAAAATTGCGAAGAATGTGAAAAAACTC
CACATTAGTGGTCTTAACAATGCAATCAACAATGCGACAGTTGTTGCTGTCCTTATTGCT
ACTGTAGCTTTTGCTGCCATCTTCACTGTACCTGGCCAATATATTGAGGAGAAAACAGAT
GGGGTTTCGCTCGGCGAAGCACACATAGCCAGGAAAGCATCTTTCATAATATTTTTCTTG
TTTGACAGTATGGCCTTGTTTATTTCCATTGCTGTTGTGGTGGTACAAACTTCTGTGGTC
GTGATTGAACAGAAGGCAAAGAAGCAGCTTATGTTTTGGATAAACAAGCTCATGTGGGCA
GCTTGCCTCTCCATTTCAATTTCCTTTATTTCACTTACTTATGTGGTGGTTGGAGAGAAG
GAAAGAGGGCTTGCCATCTATGCAACTGTCATTGGTAGCACCATAATGCTCACTACTATA
GGATCCATGTGCTATTGTGTGGTTCGGCATAGGCTAGAAGAGTCAAGGATGAGGAGTATA
AGGAGGGCCGAGACTCATTCACATTCATACTCGATGTCTGTGGCATCAGATACAGAGCTT
TACGGTGAAAACTACAAGAGGATGTATGCGGTATAG

Peptide Sequence

PEP ID

PGSC0003DMP400035438
PEP Infomation

pacid=37445864 transcript=PGSC0003DMT400052568 locus=PGSC0003DMG400020397 ID=PGSC0003DMT400052568.v4.03 annot-version=v4.03
Sequence

MEKQISFHGVIEKQQSFRNGTMEKQKSFRGLMEKQKSFRIAMERQLSFGGGERKRGKESP
GKRGDSPLHLAVRAGNLGKVKEIVHSKSTNDLLSKQNQEGETVLYVAAENGHSLVVAELL
KHLDLQTASILANNGFDAFHIAAKQGHLEVLKELLHSFPNLVMTTDSANSTALHTAAAQG
HLDVVNLLLEIDSNLAKIARNNGKTILHTAARMGHLEIVRALLSKDPEIGFRTDTKGQSA
LHMAVKGQNFDIVLELIKPNPAVLALEDNKGNRALHVATTKGRPQMVQCLISIEGIDLNA
VNRAGETALDIAEKSGSPQLVSMLKEAGATRSKDDGRPPTAAKQLKQTVSDIRHDVESQL
QHSRQTGFRVRKIAKNVKKLHISGLNNAINNATVVAVLIATVAFAAIFTVPGQYIEEKTD
GVSLGEAHIARKASFIIFFLFDSMALFISIAVVVVQTSVVVIEQKAKKQLMFWINKLMWA
ACLSISISFISLTYVVVGEKERGLAIYATVIGSTIMLTTIGSMCYCVVRHRLEESRMRSI
RRAETHSHSYSMSVASDTELYGENYKRMYAV*

Transcript Sequence

Transcript ID

PGSC0003DMT400052568
Transcript Infomation

pacid=37445864 locus=PGSC0003DMG400020397 ID=PGSC0003DMT400052568.v4.03 annot-version=v4.03
Sequence

ATGGAGAAGCAGATTAGCTTTCATGGGGTGATTGAGAAACAGCAGAGTTTTCGAAATGGG
ACGATGGAGAAGCAGAAGAGCTTTAGAGGGTTGATGGAAAAGCAGAAAAGTTTTCGGATA
GCGATGGAGAGGCAGCTGAGCTTTGGTGGTGGTGAGAGGAAAAGGGGTAAGGAATCACCA
GGGAAAAGAGGGGATTCCCCACTTCACTTGGCAGTTAGAGCAGGGAACCTTGGCAAGGTG
AAAGAAATCGTTCATAGCAAAAGCACCAATGATTTGTTATCTAAGCAAAACCAGGAGGGT
GAGACAGTTCTGTATGTTGCGGCAGAGAATGGCCATAGTTTGGTTGTTGCAGAGTTGTTA
AAACATTTAGACCTTCAGACAGCTTCTATTCTGGCAAATAATGGTTTTGATGCATTCCAT
ATTGCCGCAAAGCAGGGTCATCTTGAGGTACTGAAAGAACTGTTGCATTCATTTCCAAAC
CTAGTCATGACAACGGATTCAGCCAACTCTACAGCCTTACATACAGCAGCTGCTCAGGGA
CACCTTGATGTAGTAAATCTCCTTCTGGAGATCGATTCAAACCTTGCTAAGATAGCTCGT
AACAATGGCAAGACTATTCTCCATACAGCTGCAAGAATGGGGCACTTGGAAATAGTTAGA
GCTCTTCTAAGCAAGGATCCTGAGATTGGCTTTAGAACAGATACAAAAGGCCAAAGTGCC
TTGCACATGGCTGTAAAGGGACAAAATTTTGATATTGTTCTTGAATTAATCAAGCCAAAT
CCTGCTGTATTGGCTTTGGAAGATAACAAAGGAAACAGAGCACTTCATGTTGCGACTACA
AAGGGGCGGCCACAGATGGTACAATGTCTAATATCAATTGAGGGCATCGATCTCAATGCC
GTCAACAGGGCTGGAGAAACAGCTCTTGATATTGCAGAAAAGTCTGGATCTCCGCAGCTC
GTCTCCATGTTGAAGGAGGCAGGAGCTACCCGTTCTAAAGATGATGGGAGGCCTCCAACT
GCTGCAAAGCAGCTCAAGCAGACTGTCAGTGACATACGACATGATGTGGAGTCCCAACTC
CAACACAGTCGTCAAACTGGCTTCAGAGTGCGGAAAATTGCGAAGAATGTGAAAAAACTC
CACATTAGTGGTCTTAACAATGCAATCAACAATGCGACAGTTGTTGCTGTCCTTATTGCT
ACTGTAGCTTTTGCTGCCATCTTCACTGTACCTGGCCAATATATTGAGGAGAAAACAGAT
GGGGTTTCGCTCGGCGAAGCACACATAGCCAGGAAAGCATCTTTCATAATATTTTTCTTG
TTTGACAGTATGGCCTTGTTTATTTCCATTGCTGTTGTGGTGGTACAAACTTCTGTGGTC
GTGATTGAACAGAAGGCAAAGAAGCAGCTTATGTTTTGGATAAACAAGCTCATGTGGGCA
GCTTGCCTCTCCATTTCAATTTCCTTTATTTCACTTACTTATGTGGTGGTTGGAGAGAAG
GAAAGAGGGCTTGCCATCTATGCAACTGTCATTGGTAGCACCATAATGCTCACTACTATA
GGATCCATGTGCTATTGTGTGGTTCGGCATAGGCTAGAAGAGTCAAGGATGAGGAGTATA
AGGAGGGCCGAGACTCATTCACATTCATACTCGATGTCTGTGGCATCAGATACAGAGCTT
TACGGTGAAAACTACAAGAGGATGTATGCGGTATAG