Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400052535
CDS Infomation

pacid=37447206 polypeptide=PGSC0003DMP400035413 locus=PGSC0003DMG400020383 ID=PGSC0003DMT400052535.v4.03 annot-version=v4.03
Sequence

ATGGAGAAAAAGCTCAAGGATAAGAAATGGAGTTATGAAAAGAGAAGCCCTTTGCAAGAT
CTGAATGTTATTCCCAGATGTAAAAGCAAGAGTAGCACCATTGAAGCCCCAAGAGGTCGT
CTTCCTTTTCTCATCTCTTCAAATTCTTCTTCTTCTTCGTCTTCCTCTGTTTCCTCATCT
TCTTCTTCCAGAACGCATTTCCACAAAACACCGAAAGTTTCTTCGAGAATTTCAAATCCA
GTGCCTAAATCTACACGTTTGAGATCTAAATCCACCAACGAGAATGATTTACCAAGACCC
ATTACGCAAAAACCCAAAAAGAACCCTCCTTTCCTATCTGGGAAGAAACCCATCTCCCGA
AAGTCAAATCTGAGCAATCCTGTGAAGAAATCGTCATTTGGGTCGGTAAGATTGGGGGTT
AAACCCAAGAGTTTGAAGCAAAAGGTGGAAGGAAATGGCTCAGGTGAGCAAATTCAGCTT
TTGGATTTTGATTGTAATTTGACTAGTTTTGAGAATTGTACACCTCTTGGTAAATTAGCA
TCTGGTTCTGGTATTGATTGTGCAACTTTAGATCATACTTGTAATGTAGATAACTCAAAT
ACAACTAGTAATACTACAAAAACACCTCCCATTGAGGCTTCAGTGTCACCTGAAATACAA
TGTGGGCTATCCACTGGGTTGGTTTCAGCTGCTACACCTTGTTATGCTGCTGGCCATGTT
CTCTCTGGTGTTACTGATAAAAGGAAGTGTAGGCCTAGAGGTGTTCTCACTATAGGAAAC
TTAATTGATTCGTCAGATTGCGAAAAAGCCAGTGGCTCATTGGATAGAAAGTGTGAGGGG
GCTGGAAGGAATGAGGTACTTAACAAGTCTAGTAGAGATTCTTTGATTCCTTTGCCTGCA
TTGGCTTCTATGCATTGGCTTTTATCTCCTTGCCGTGAGAATAATGACGTCTGTTGTGAG
GGTGAATCTGTTAACGAATTTAGGATGTTGAATGGATCTGCCACATTTGAGTTGCCGTAT
TCAACTTCAATATGTTCTGGGAGTACTTCTGATTCAGTACATAACAGAGCAAATTACTGT
AATAGTGTAAATACGGATGAAGCACAAATTGGTGGAAAAGCTTGGATTGTTTTGGTCTCT
CCTGAAAGTACTAAACTTAAAGATCCATTGTCTGACGAGATGGGGAGGAATTTGTTTCCA
TCTTATCCCCTGGATATATCTTGTTGTCATGATGTGAAAGTCCCGGATGAGTGGAAATGT
TCGTGCAGTCTTGTTAGAGAGAATTCTCCATGCTCTACGGCTTCTTTGAGCAGTGGGAAT
GTCATTCAAACACCCAAATCCGATTTGAGCTCAGGCAAGTGTGGTGGCTTTTCATGGTTA
CACCCAGGTGATCATCGAGACAACCTTAGGGATGAACTTGATTCAGTGACAGATTTTCTT
CACAAAACAAGTTTATCACCTATGACTCAACCGTCAGCTTTAAATCCGCCTAATCCGCAT
TTTAAGTTTAATAGTGCTTCTTGGGTGTCTGACTCCTCATTAGAAAATGTATCACAATCT
CAGATGAGAATCTCATGGAGAGATGGGATATTGAGTCGGACTCTTGAGATTGATGATTTA
GATTGCTGCAGATGTTTATCAGATGATGAGAATGGGGGCTACTGTTACACTAATGCAAAG
ACAAATGTTGGTGTTGAATCCAGTCCCCATGAAGAAAATGATCTTTTACCAGAGAGTGGT
TCTCAGTCTCCTGAATTTGTAGAGCACAAACACGAGCTTTCTCGGAATGGAAAGTTAAGG
TCTCCTCTTCCAGAAGCTAATTCGTGTGCAGAGTCCATACAGACTGAAGGTGGTGGTTTA
GTTTCATCTGCAGATTCTGACTGGACCCATTGTTGTAATAATCAGTTGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400035413
PEP Infomation

pacid=37447206 transcript=PGSC0003DMT400052535 locus=PGSC0003DMG400020383 ID=PGSC0003DMT400052535.v4.03 annot-version=v4.03
Sequence

MEKKLKDKKWSYEKRSPLQDLNVIPRCKSKSSTIEAPRGRLPFLISSNSSSSSSSSVSSS
SSSRTHFHKTPKVSSRISNPVPKSTRLRSKSTNENDLPRPITQKPKKNPPFLSGKKPISR
KSNLSNPVKKSSFGSVRLGVKPKSLKQKVEGNGSGEQIQLLDFDCNLTSFENCTPLGKLA
SGSGIDCATLDHTCNVDNSNTTSNTTKTPPIEASVSPEIQCGLSTGLVSAATPCYAAGHV
LSGVTDKRKCRPRGVLTIGNLIDSSDCEKASGSLDRKCEGAGRNEVLNKSSRDSLIPLPA
LASMHWLLSPCRENNDVCCEGESVNEFRMLNGSATFELPYSTSICSGSTSDSVHNRANYC
NSVNTDEAQIGGKAWIVLVSPESTKLKDPLSDEMGRNLFPSYPLDISCCHDVKVPDEWKC
SCSLVRENSPCSTASLSSGNVIQTPKSDLSSGKCGGFSWLHPGDHRDNLRDELDSVTDFL
HKTSLSPMTQPSALNPPNPHFKFNSASWVSDSSLENVSQSQMRISWRDGILSRTLEIDDL
DCCRCLSDDENGGYCYTNAKTNVGVESSPHEENDLLPESGSQSPEFVEHKHELSRNGKLR
SPLPEANSCAESIQTEGGGLVSSADSDWTHCCNNQL*

Transcript Sequence

Transcript ID

PGSC0003DMT400052535
Transcript Infomation

pacid=37447206 locus=PGSC0003DMG400020383 ID=PGSC0003DMT400052535.v4.03 annot-version=v4.03
Sequence

ATGGAGAAAAAGCTCAAGGATAAGAAATGGAGTTATGAAAAGAGAAGCCCTTTGCAAGAT
CTGAATGTTATTCCCAGATGTAAAAGCAAGAGTAGCACCATTGAAGCCCCAAGAGGTCGT
CTTCCTTTTCTCATCTCTTCAAATTCTTCTTCTTCTTCGTCTTCCTCTGTTTCCTCATCT
TCTTCTTCCAGAACGCATTTCCACAAAACACCGAAAGTTTCTTCGAGAATTTCAAATCCA
GTGCCTAAATCTACACGTTTGAGATCTAAATCCACCAACGAGAATGATTTACCAAGACCC
ATTACGCAAAAACCCAAAAAGAACCCTCCTTTCCTATCTGGGAAGAAACCCATCTCCCGA
AAGTCAAATCTGAGCAATCCTGTGAAGAAATCGTCATTTGGGTCGGTAAGATTGGGGGTT
AAACCCAAGAGTTTGAAGCAAAAGGTGGAAGGAAATGGCTCAGGTGAGCAAATTCAGCTT
TTGGATTTTGATTGTAATTTGACTAGTTTTGAGAATTGTACACCTCTTGGTAAATTAGCA
TCTGGTTCTGGTATTGATTGTGCAACTTTAGATCATACTTGTAATGTAGATAACTCAAAT
ACAACTAGTAATACTACAAAAACACCTCCCATTGAGGCTTCAGTGTCACCTGAAATACAA
TGTGGGCTATCCACTGGGTTGGTTTCAGCTGCTACACCTTGTTATGCTGCTGGCCATGTT
CTCTCTGGTGTTACTGATAAAAGGAAGTGTAGGCCTAGAGGTGTTCTCACTATAGGAAAC
TTAATTGATTCGTCAGATTGCGAAAAAGCCAGTGGCTCATTGGATAGAAAGTGTGAGGGG
GCTGGAAGGAATGAGGTACTTAACAAGTCTAGTAGAGATTCTTTGATTCCTTTGCCTGCA
TTGGCTTCTATGCATTGGCTTTTATCTCCTTGCCGTGAGAATAATGACGTCTGTTGTGAG
GGTGAATCTGTTAACGAATTTAGGATGTTGAATGGATCTGCCACATTTGAGTTGCCGTAT
TCAACTTCAATATGTTCTGGGAGTACTTCTGATTCAGTACATAACAGAGCAAATTACTGT
AATAGTGTAAATACGGATGAAGCACAAATTGGTGGAAAAGCTTGGATTGTTTTGGTCTCT
CCTGAAAGTACTAAACTTAAAGATCCATTGTCTGACGAGATGGGGAGGAATTTGTTTCCA
TCTTATCCCCTGGATATATCTTGTTGTCATGATGTGAAAGTCCCGGATGAGTGGAAATGT
TCGTGCAGTCTTGTTAGAGAGAATTCTCCATGCTCTACGGCTTCTTTGAGCAGTGGGAAT
GTCATTCAAACACCCAAATCCGATTTGAGCTCAGGCAAGTGTGGTGGCTTTTCATGGTTA
CACCCAGGTGATCATCGAGACAACCTTAGGGATGAACTTGATTCAGTGACAGATTTTCTT
CACAAAACAAGTTTATCACCTATGACTCAACCGTCAGCTTTAAATCCGCCTAATCCGCAT
TTTAAGTTTAATAGTGCTTCTTGGGTGTCTGACTCCTCATTAGAAAATGTATCACAATCT
CAGATGAGAATCTCATGGAGAGATGGGATATTGAGTCGGACTCTTGAGATTGATGATTTA
GATTGCTGCAGATGTTTATCAGATGATGAGAATGGGGGCTACTGTTACACTAATGCAAAG
ACAAATGTTGGTGTTGAATCCAGTCCCCATGAAGAAAATGATCTTTTACCAGAGAGTGGT
TCTCAGTCTCCTGAATTTGTAGAGCACAAACACGAGCTTTCTCGGAATGGAAAGTTAAGG
TCTCCTCTTCCAGAAGCTAATTCGTGTGCAGAGTCCATACAGACTGAAGGTGGTGGTTTA
GTTTCATCTGCAGATTCTGACTGGACCCATTGTTGTAATAATCAGTTGTAG