Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400052472
CDS Infomation

pacid=37454761 polypeptide=PGSC0003DMP400035375 locus=PGSC0003DMG400020365 ID=PGSC0003DMT400052472.v4.03 annot-version=v4.03
Sequence

ATGGCTTTGGTTGGTACAGATAAAGATATGTCGTTTTACATTGGTCGCGAGGCTTCAAAG
TTATGGAAGAGATTTTGTGCGGAGATAACAACAGAGATCAATCTTCTTGCTGATAATTGG
AAATATCTTCTTGGTGGTTTTATTTGTCAGTACATCCATGGACTTGCTGCTAGAGGGGTG
CATTACTTTCACCGGCCTGGACCAATTCTTCAGGATGTCGGCTTCTATCTTCTTCCGGAG
CTTGGACAAGATAGAGCTTACATAAGTGAAACTGTATTCACCACCATCTTTCTATCTTTC
ATCATGTGGACGTTCCATCCTTTTATTTTCAAGACCAAAAAGATCTATACAGTTCTGATA
TGGTGCAGGGTCCTGGCATTCTTAGTTGGTTGTCAATTCCTTCGGATCATAACGTTCTAT
TCTACACAGCTTCCTGGTCCAAACTATCACTGTCGTGAGGGTTCAAAGCTTGCCACGCTT
CCTCCTCCTGACAACATTTTACAAGCACTGTTGATTGTTCCTCGTGGTATGCTTTATGGT
TGTGGTGATCTAATATTTTCATCTCACATGATATTCTCCATAGTCTTTGTGCGGACATAC
CAGAAATATGGAACACGAAGGTTTATAAAACAGTGTGCTTGGTTAGCTGTTATTGCACAA
AGCTTTTTGATTATTGCATCCCGCAAGCATTACACTGTTGACGTCGTTGTAGCATGGTAC
ACTGTCAACCTTGTAGTCTTCTTCATCGATAAAACATTACCAGAACTGCCTGATCGCACT
AGTGCCTTGTTGCTTCCAGTCACCAAGGATAGCAAATCTAAAGAAGAGAATCACAAACTG
CTGAATGGAAATTCGGGAGATCCTGCAGAATGGAGGCCCCGAACCCAAATCAACGGGAAG
ATTGTGGAAGATGGAAAAACAGTACACGAAGCAGTGATTAATGGTGTTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400035375
PEP Infomation

pacid=37454761 transcript=PGSC0003DMT400052472 locus=PGSC0003DMG400020365 ID=PGSC0003DMT400052472.v4.03 annot-version=v4.03
Sequence

MALVGTDKDMSFYIGREASKLWKRFCAEITTEINLLADNWKYLLGGFICQYIHGLAARGV
HYFHRPGPILQDVGFYLLPELGQDRAYISETVFTTIFLSFIMWTFHPFIFKTKKIYTVLI
WCRVLAFLVGCQFLRIITFYSTQLPGPNYHCREGSKLATLPPPDNILQALLIVPRGMLYG
CGDLIFSSHMIFSIVFVRTYQKYGTRRFIKQCAWLAVIAQSFLIIASRKHYTVDVVVAWY
TVNLVVFFIDKTLPELPDRTSALLLPVTKDSKSKEENHKLLNGNSGDPAEWRPRTQINGK
IVEDGKTVHEAVINGV*

Transcript Sequence

Transcript ID

PGSC0003DMT400052472
Transcript Infomation

pacid=37454761 locus=PGSC0003DMG400020365 ID=PGSC0003DMT400052472.v4.03 annot-version=v4.03
Sequence

ATGGCTTTGGTTGGTACAGATAAAGATATGTCGTTTTACATTGGTCGCGAGGCTTCAAAG
TTATGGAAGAGATTTTGTGCGGAGATAACAACAGAGATCAATCTTCTTGCTGATAATTGG
AAATATCTTCTTGGTGGTTTTATTTGTCAGTACATCCATGGACTTGCTGCTAGAGGGGTG
CATTACTTTCACCGGCCTGGACCAATTCTTCAGGATGTCGGCTTCTATCTTCTTCCGGAG
CTTGGACAAGATAGAGCTTACATAAGTGAAACTGTATTCACCACCATCTTTCTATCTTTC
ATCATGTGGACGTTCCATCCTTTTATTTTCAAGACCAAAAAGATCTATACAGTTCTGATA
TGGTGCAGGGTCCTGGCATTCTTAGTTGGTTGTCAATTCCTTCGGATCATAACGTTCTAT
TCTACACAGCTTCCTGGTCCAAACTATCACTGTCGTGAGGGTTCAAAGCTTGCCACGCTT
CCTCCTCCTGACAACATTTTACAAGCACTGTTGATTGTTCCTCGTGGTATGCTTTATGGT
TGTGGTGATCTAATATTTTCATCTCACATGATATTCTCCATAGTCTTTGTGCGGACATAC
CAGAAATATGGAACACGAAGGTTTATAAAACAGTGTGCTTGGTTAGCTGTTATTGCACAA
AGCTTTTTGATTATTGCATCCCGCAAGCATTACACTGTTGACGTCGTTGTAGCATGGTAC
ACTGTCAACCTTGTAGTCTTCTTCATCGATAAAACATTACCAGAACTGCCTGATCGCACT
AGTGCCTTGTTGCTTCCAGTCACCAAGGATAGCAAATCTAAAGAAGAGAATCACAAACTG
CTGAATGGAAATTCGGGAGATCCTGCAGAATGGAGGCCCCGAACCCAAATCAACGGGAAG
ATTGTGGAAGATGGAAAAACAGTACACGAAGCAGTGATTAATGGTGTTTAG