Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400052443
CDS Infomation

pacid=37455137 polypeptide=PGSC0003DMP400035354 locus=PGSC0003DMG400020356 ID=PGSC0003DMT400052443.v4.03 annot-version=v4.03
Sequence

ATGGGAGGAGGAGATCACGGCGGCAAATCGGATATCTCATTCGCCGGAATATTCGCAAGT
AGTGCCTTTGCTGCTTGTTTCGCTGAGGCGTGTACTTTACCATTGGATACTGCTAAAGTT
AGACTTCAGCTTCAAAAGAAGGCAGTTGAAGGGGATGGGCTAGCTTTACCTAAATATAGG
GGATTATTAGGTACTGTTGGCACCATTGCAAAGGAAGAAGGAATAGCTTCACTATGGAAG
GGTATCGTACCTGGGTTACATCGTCAATGTATATATGGAGGTCTTCGGATTGGGATGTAT
GAACCTGTTAAAAACTTATATGTTGGCAAAGATCATGTTGGGGATGTGCCATTGTCAAAG
AAAATACTTGCTGCACTTACAACTGGTGCGTTGGGCATTACAATTGCAAATCCTACAGAT
CTAGTTAAAGTACGTCTTCAAGCTGAAGGAAAATTGCCAGCAGGTGTGCCGAGGCGTTAT
TCTGGAGCTCTAAATGCCTACTCAACAATAGTGAAACAGGAAGGAGTTCGAGCTCTGTGG
ACTGGTCTTGGACCCAATATTGGGCGGAATGCCATCATCAATGCAGCTGAATTAGCAAGT
TATGATCAAGTGAAGGAGGCTGTTCTTAGGATTCCTGGGTTCACAGACAATGTTGTTACT
CATTTGATTGCGGGGCTTGGAGCTGGTTTTTTTGCAGTTTGCATAGGGTCTCCTGTTGAT
GTGGTAAAGTCGAGAATGATGGGAGATTCCGCATACAAAAATACTCTTGATTGTTTTGTC
AAAACATTGAAGAATGATGGACCTTTGGCTTTCTACAAAGGCTTTATCCCAAATTTTGGA
CGCTTGGGATCTTGGAATGTCATTATGTTTCTAACATTGGAGCAGACTAGCACATGTTTT
GCTTCAATGAGAGGCTTTCTCAATTTCCAGTTGCTTCCTGTTTCAACTGTTGACTTGGCA
ACACTTTGTTCCATTAGGCTTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400035354
PEP Infomation

pacid=37455137 transcript=PGSC0003DMT400052443 locus=PGSC0003DMG400020356 ID=PGSC0003DMT400052443.v4.03 annot-version=v4.03
Sequence

MGGGDHGGKSDISFAGIFASSAFAACFAEACTLPLDTAKVRLQLQKKAVEGDGLALPKYR
GLLGTVGTIAKEEGIASLWKGIVPGLHRQCIYGGLRIGMYEPVKNLYVGKDHVGDVPLSK
KILAALTTGALGITIANPTDLVKVRLQAEGKLPAGVPRRYSGALNAYSTIVKQEGVRALW
TGLGPNIGRNAIINAAELASYDQVKEAVLRIPGFTDNVVTHLIAGLGAGFFAVCIGSPVD
VVKSRMMGDSAYKNTLDCFVKTLKNDGPLAFYKGFIPNFGRLGSWNVIMFLTLEQTSTCF
ASMRGFLNFQLLPVSTVDLATLCSIRL*

Transcript Sequence

Transcript ID

PGSC0003DMT400052443
Transcript Infomation

pacid=37455137 locus=PGSC0003DMG400020356 ID=PGSC0003DMT400052443.v4.03 annot-version=v4.03
Sequence

ATGGGAGGAGGAGATCACGGCGGCAAATCGGATATCTCATTCGCCGGAATATTCGCAAGT
AGTGCCTTTGCTGCTTGTTTCGCTGAGGCGTGTACTTTACCATTGGATACTGCTAAAGTT
AGACTTCAGCTTCAAAAGAAGGCAGTTGAAGGGGATGGGCTAGCTTTACCTAAATATAGG
GGATTATTAGGTACTGTTGGCACCATTGCAAAGGAAGAAGGAATAGCTTCACTATGGAAG
GGTATCGTACCTGGGTTACATCGTCAATGTATATATGGAGGTCTTCGGATTGGGATGTAT
GAACCTGTTAAAAACTTATATGTTGGCAAAGATCATGTTGGGGATGTGCCATTGTCAAAG
AAAATACTTGCTGCACTTACAACTGGTGCGTTGGGCATTACAATTGCAAATCCTACAGAT
CTAGTTAAAGTACGTCTTCAAGCTGAAGGAAAATTGCCAGCAGGTGTGCCGAGGCGTTAT
TCTGGAGCTCTAAATGCCTACTCAACAATAGTGAAACAGGAAGGAGTTCGAGCTCTGTGG
ACTGGTCTTGGACCCAATATTGGGCGGAATGCCATCATCAATGCAGCTGAATTAGCAAGT
TATGATCAAGTGAAGGAGGCTGTTCTTAGGATTCCTGGGTTCACAGACAATGTTGTTACT
CATTTGATTGCGGGGCTTGGAGCTGGTTTTTTTGCAGTTTGCATAGGGTCTCCTGTTGAT
GTGGTAAAGTCGAGAATGATGGGAGATTCCGCATACAAAAATACTCTTGATTGTTTTGTC
AAAACATTGAAGAATGATGGACCTTTGGCTTTCTACAAAGGCTTTATCCCAAATTTTGGA
CGCTTGGGATCTTGGAATGTCATTATGTTTCTAACATTGGAGCAGACTAGCACATGTTTT
GCTTCAATGAGAGGCTTTCTCAATTTCCAGTTGCTTCCTGTTTCAACTGTTGACTTGGCA
ACACTTTGTTCCATTAGGCTTTGA