Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400052440
CDS Infomation

pacid=37456191 polypeptide=PGSC0003DMP400035353 locus=PGSC0003DMG400020355 ID=PGSC0003DMT400052440.v4.03 annot-version=v4.03
Sequence

ATGGAGTTTTCTTTTCTAAAGACTTATAATCTCTTTTTGTTGGCACTATTTTTCTTGGTT
TTAGTTGATACACTAACACTTGCAAAACATGAAGGGATTACAAGGCACTACAAGTTTAAT
ATTCAAATGCAAAATGTGACAAGATTGTGTCAAACAAAGAACATTGTGACAGTGAATGGG
AAGTTTCCAGGGCCAAGAATTATTGCAAGAGAAGGAGACAGACTTGTTATTAAGGTTGTT
AACAATGTTCAACACAATGTCACCATTCATTGGCATGGAGTGAGACAACTAAGAAGTGGA
TGGGCAGATGGACCTGCTTATATTACACAATGCCCAATTCAGAGAGGGCAAAGTTATGTG
TATAATTTCACTATTATTGGTCAAAGAGGAACTTTATTTTGGCATGCTCACATTTCATGG
CTAAGAGTAACACTCTATGGACCTATTGTTATTCTTCCAAAGAAAGGTGTTGCTTATCCT
TTTCCACAACCCTTCAAGGAAGTCCCAATTCTTTTTGGTGAATGGTGGAAGGCAGATACA
GAGAAAATAATTAATCAAGCCCTTCAAACAGGAGGACCTCCAAATATTTCTGATGCTTAT
ACCATCAATGGTCTACCTGGACTTCTCTACAATTGTTCTGCTAAAGATACATTCAAATTG
AAGGTGAAACCAGGGAAAACATATCTACTAAGAGTAGTCAATGCTGCACTAAATGATGAA
CTTTTTTTCAGTATAGCAAATCATAACCTTACTGTTGTAGAAGTTGATGCTGTTTATGTG
AAACCATTCAACACAAACATAATTCTTATAACACCAGGACAAACCACAAATATCCTCTTG
AAAACCAAACATTTTCATCCTAATGCCACCTTCCTCATGTCAGCTCGGCCTTACGCGACT
GGTCCTGCTTCCTTTGACAATTCCACCACCACTGGAATATTAGAATATCATAAACCCTCT
AACAATACTAAAAAGAGCAACATATTTCCTCTGTTGAAACCAAAACTCCCTATATTCAAT
GACACAACTTTTGCTACAAGTTTTGTCAAGAAAATCAGAAGCTTAGCCAACGCGAAGTTT
CCAGCCAATGTACCTAAAAAAGTTGATAAACAGTTTTTCTTCACTGTTGGATTAGGATTG
AATCCATGTCCTAAGAATCAAACATGTCAAGGACCAAATAACACTAAATTGGCAGCTTCT
GTTAACAACGTATCGTTTGTTCAGCCAAATGTAGCTCTACTTCAATCACACTATTTTAAC
CAATCTAAAGGAGTTTATACAACAGATTTTCCAGTCAATCCGCCGTTTAAATTCAATTAC
ACAGGAAATCCACCAAACAATAGTTTTGTTACCTCAGGCACAAAAGTTGTGATGTTGCCT
TTTAATACTAGTGTGGAATTAGTTATGCAAGATACAAGTATTATAAGCGCCGAAAGTCAT
CCACTTCACCTTCATGGTTTCAATTTCTTTGTGGTTGGACAAGGATTTGGAAATTATAAT
TCTAGCAATGATCCTGCTAATTTCAACCTTGTTGATCCTGCTGAAAGGAACACTGTTGGT
GTTCCGTCTGGAGGTTGGGTCGCCATTCGCTTCCTTGCAGACAATCCAGGAGTATGGTTC
ATGCATTGTCATCTTGAAGTACACACAAGTTGGGGCTTGAAAATGGTTTGGATGGTAAAT
GATGGAAAAAGTCCTAAGCAGAAGTTACCTCCTCCACCAGCTGATCTTCCTAAATGTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400035353
PEP Infomation

pacid=37456191 transcript=PGSC0003DMT400052440 locus=PGSC0003DMG400020355 ID=PGSC0003DMT400052440.v4.03 annot-version=v4.03
Sequence

MEFSFLKTYNLFLLALFFLVLVDTLTLAKHEGITRHYKFNIQMQNVTRLCQTKNIVTVNG
KFPGPRIIAREGDRLVIKVVNNVQHNVTIHWHGVRQLRSGWADGPAYITQCPIQRGQSYV
YNFTIIGQRGTLFWHAHISWLRVTLYGPIVILPKKGVAYPFPQPFKEVPILFGEWWKADT
EKIINQALQTGGPPNISDAYTINGLPGLLYNCSAKDTFKLKVKPGKTYLLRVVNAALNDE
LFFSIANHNLTVVEVDAVYVKPFNTNIILITPGQTTNILLKTKHFHPNATFLMSARPYAT
GPASFDNSTTTGILEYHKPSNNTKKSNIFPLLKPKLPIFNDTTFATSFVKKIRSLANAKF
PANVPKKVDKQFFFTVGLGLNPCPKNQTCQGPNNTKLAASVNNVSFVQPNVALLQSHYFN
QSKGVYTTDFPVNPPFKFNYTGNPPNNSFVTSGTKVVMLPFNTSVELVMQDTSIISAESH
PLHLHGFNFFVVGQGFGNYNSSNDPANFNLVDPAERNTVGVPSGGWVAIRFLADNPGVWF
MHCHLEVHTSWGLKMVWMVNDGKSPKQKLPPPPADLPKC*

Transcript Sequence

Transcript ID

PGSC0003DMT400052440
Transcript Infomation

pacid=37456191 locus=PGSC0003DMG400020355 ID=PGSC0003DMT400052440.v4.03 annot-version=v4.03
Sequence

ATGGAGTTTTCTTTTCTAAAGACTTATAATCTCTTTTTGTTGGCACTATTTTTCTTGGTT
TTAGTTGATACACTAACACTTGCAAAACATGAAGGGATTACAAGGCACTACAAGTTTAAT
ATTCAAATGCAAAATGTGACAAGATTGTGTCAAACAAAGAACATTGTGACAGTGAATGGG
AAGTTTCCAGGGCCAAGAATTATTGCAAGAGAAGGAGACAGACTTGTTATTAAGGTTGTT
AACAATGTTCAACACAATGTCACCATTCATTGGCATGGAGTGAGACAACTAAGAAGTGGA
TGGGCAGATGGACCTGCTTATATTACACAATGCCCAATTCAGAGAGGGCAAAGTTATGTG
TATAATTTCACTATTATTGGTCAAAGAGGAACTTTATTTTGGCATGCTCACATTTCATGG
CTAAGAGTAACACTCTATGGACCTATTGTTATTCTTCCAAAGAAAGGTGTTGCTTATCCT
TTTCCACAACCCTTCAAGGAAGTCCCAATTCTTTTTGGTGAATGGTGGAAGGCAGATACA
GAGAAAATAATTAATCAAGCCCTTCAAACAGGAGGACCTCCAAATATTTCTGATGCTTAT
ACCATCAATGGTCTACCTGGACTTCTCTACAATTGTTCTGCTAAAGATACATTCAAATTG
AAGGTGAAACCAGGGAAAACATATCTACTAAGAGTAGTCAATGCTGCACTAAATGATGAA
CTTTTTTTCAGTATAGCAAATCATAACCTTACTGTTGTAGAAGTTGATGCTGTTTATGTG
AAACCATTCAACACAAACATAATTCTTATAACACCAGGACAAACCACAAATATCCTCTTG
AAAACCAAACATTTTCATCCTAATGCCACCTTCCTCATGTCAGCTCGGCCTTACGCGACT
GGTCCTGCTTCCTTTGACAATTCCACCACCACTGGAATATTAGAATATCATAAACCCTCT
AACAATACTAAAAAGAGCAACATATTTCCTCTGTTGAAACCAAAACTCCCTATATTCAAT
GACACAACTTTTGCTACAAGTTTTGTCAAGAAAATCAGAAGCTTAGCCAACGCGAAGTTT
CCAGCCAATGTACCTAAAAAAGTTGATAAACAGTTTTTCTTCACTGTTGGATTAGGATTG
AATCCATGTCCTAAGAATCAAACATGTCAAGGACCAAATAACACTAAATTGGCAGCTTCT
GTTAACAACGTATCGTTTGTTCAGCCAAATGTAGCTCTACTTCAATCACACTATTTTAAC
CAATCTAAAGGAGTTTATACAACAGATTTTCCAGTCAATCCGCCGTTTAAATTCAATTAC
ACAGGAAATCCACCAAACAATAGTTTTGTTACCTCAGGCACAAAAGTTGTGATGTTGCCT
TTTAATACTAGTGTGGAATTAGTTATGCAAGATACAAGTATTATAAGCGCCGAAAGTCAT
CCACTTCACCTTCATGGTTTCAATTTCTTTGTGGTTGGACAAGGATTTGGAAATTATAAT
TCTAGCAATGATCCTGCTAATTTCAACCTTGTTGATCCTGCTGAAAGGAACACTGTTGGT
GTTCCGTCTGGAGGTTGGGTCGCCATTCGCTTCCTTGCAGACAATCCAGGAGTATGGTTC
ATGCATTGTCATCTTGAAGTACACACAAGTTGGGGCTTGAAAATGGTTTGGATGGTAAAT
GATGGAAAAAGTCCTAAGCAGAAGTTACCTCCTCCACCAGCTGATCTTCCTAAATGTTGA