Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400052425
CDS Infomation

pacid=37457069 polypeptide=PGSC0003DMP400035345 locus=PGSC0003DMG400020350 ID=PGSC0003DMT400052425.v4.03 annot-version=v4.03
Sequence

ATGAAAACTAGGGTTTTTTTACTCTGTTTTCTCATCCTTTCGTCGAATTTCTCTCATTTG
CAATCGGAGGAAACGAAGACTAACAAATTCCGAGAACGAGAAGCTACAGATGATTCCAGT
GCTTATCCAAATATAGATGAGGATGAATTGCTGAATACACAATGCCCCCAGCATTTGGAG
CTAAGATGGCAGACAGAAGTTAGTTCTAGTGTGTATGCCTCGCCCTTGATAGCTGACATT
AACAGTGATGGGAAGCTTGAGGTTGTAGTTCCCTCGTTTGTTCATTACTTGGAAGTTCTG
GAAGGTTCTGATGGAGATAAACTGCCAGGATGGCCAGCTTTTCATCAATCTACCATTCAT
TCCAGTCCTTTACTGTATGACATTGACAAGGATGGAGTGAGGGAGATAGGTTTGGCCACC
TACAATGGTGAGGTGCTCTTTTTCAGGGTGTCAGGATACTTGATGTCTGATAAACTTGAG
ATTCCTCGGTTGAAGGTAAAAAAGAATTGGTATGTGGGTTTGAATTCAGTCCCTGTGGAC
CGTTCTCATCCGGATGTCCACGATGACCAACTAATCCAGGAGCATCTGATGGAATCTGTA
GTTCGTCATAATGCATCTAGTCACAGTGGCAACCATTCAGACTCTATAGCATCGGCTGTT
CACAATGAGACACATTCTGTTCTGGAAGAAGTCCACCATGATGCATCTAGTCACAGTGGC
AACCATAATGCATCTAGTCACAGTGGCAACCATTCAGACTCTATAGCATCGGCTGTTCAC
AATGAGACACATTCTGTTCTGGAAGAAGTCCACCATGATGCATCTAGTCACAGTGGCAAC
CATAATGCATCTAGTCACAGTGGCAACCATTCAGACTCTATAGCATCGGCTGTTCACAAT
GAGACACATTCTGTTCTGGAAGAAGTCCACCATGATGCATCTAGTCACAGTGGCAACCAT
AATGCATCTAGTCACAGTGGCAACCATTCAGACTCTATAGCATCGGCTGTTCACAATGAG
ACACATTCTGTTCTGGAAGAAGTCCACCATGATGCATCTAGTCACAGTGGCAACCATAAT
GCATCTAGTCACAGTGGCAACCATTCAGACTCTACAGCATCGGCTGTTCACAATGAGACA
CATTCTGTTGTGGAAGAAGTCCACCATGATGCATTTAATGCTTCAATATCTTTGCCATCA
GAAGTTTCACATGACAACTCTTCTAACATGGCTAACTTAAACAATAGTATTCTGAGTTCT
GAAAATGAGAAAATTAGGAATTTGGAAAATGGAACCAATACCGGAAGAAGGCTTCTTGAA
GATGACGTGTCAAAAAGAGCTGAGGAAGATGTTCAAGCTGCAACTGTGGAAAATGAAGAA
GGTCTAGAAGCGGATGCTGATTCATCTTTTGAGTTATTTCGTGACAGTGATGAGTTGGCA
GATGAGTATAATTACGATTATGATGATTACGTTGATGAGCACTCGTGGGATGATGAAGAA
TTTCAGGAGCCAGAGCATGAGAAAGTAGAGGATTATGTGGATGTTGATGCTCATGTTTTG
TGTACGCCTGTCATAGCAGACATTGACAATGATGGGGTGTCAGAGATGATTGTTGCAGTT
TCCTATTTCTTTGACCATGAGTACTACCAAAATTCGGAGCATTTGAAGGAGCTTGGAGAC
ATTGAAATTGGAAAATATGTATCTGGTGGTATTGTTGTTTTTAATCTAGATACCAAGCAA
GTTAAATGGACTCTACAGCTGGACCTAAGTACTGACTCAGAGAACTTCCGTCCCTACATC
CACTCTGCCCCTACGGTAGTTGATTTGGATGGTGATGGAAATTTGGACATTCTAGTTGGG
ACCTCTTATGGAATGTTTTATGTCTTGGATCACAAGGGGAAAGTGAGGGATAAGTTTCCT
CTCGCAATGGCTGACATCCAAGGAGCAGTAATTGCAGCTGATATAAATGATGATGGCAAG
ATTGAACTAGTTACTACAGATTCACATGGCAATGTTGCTGCATGGACTGCACAGGGCAAA
GAAATTTGGGAAAATCATCTTAAAAGCCTTGTTCCTCAGGGACCTGCCGTTGGTGATGTG
GATGGGGATGGCCATACCGATATCGTTGTTCCAACAGTTTCAGGGAATATTTATGTTCTG
AGTGGCAAGGATGGCTCCATTATACGCCCATATCCTTACAGGACTCATGGTAGAGTGATG
AATCAAGTTCTTCTTGTTGACTTGACCAAACATGGGCAGAAGAAAAAAGGGCTTACAATC
GTTACTACATCATTTGATGGTTACTTGTACCTCATAGATGGACCTACATCATGTGCTGAT
GTTGTAGATATTGGTGAAACATCATACAGCATGGTCTTGGCTGACAATGTTGATGGTGGA
GATGACCTCGATCTTATTGTGACTACCATGAATGGCAATGTCTTCTGTTTCTCGACACCT
TCTCCACATCATCCCCTCAAGTCATGGAGATCACCTAACCAAGGGAGAAATAATGCTGCA
TATCGATTAGATCGTGAGGGAGTCTATGTTACTCCATCATCAAGAGCTTTCCGTGATGAA
GAAGGCAAAAGCTTTTGGATTGAAATAGAAATTTTTGATAAATACAGATATCCATCTGGG
TCTCAAGCTCCATATAATGTCACGGTGAGTTTGTTAGTACCTGGCAATTACCAAGGTGAT
AGAACTATTAAGCAAAATAAGATATTTAATCAACCTGGAAAACATCGGCTTATGCTCCCA
ACTGTTTCTGTGAGAACTGCTGGTACAGTGTTGGTGGAGATGGTTGACAAGAATGGGCTA
TATTTCTCTGATGATTTCTCCTTGACATTCCATTTTCATTATTATAAGCTGTTAAAATGG
CTTCTCGTTCTTCCTATGCTGGGGATGTTTGGTGTGCTTGTCATTCTTCGTCCGCAGGAG
GCCATGCCATTACCATCATTTACGCGAAACACCAACCTCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400035345
PEP Infomation

pacid=37457069 transcript=PGSC0003DMT400052425 locus=PGSC0003DMG400020350 ID=PGSC0003DMT400052425.v4.03 annot-version=v4.03
Sequence

MKTRVFLLCFLILSSNFSHLQSEETKTNKFREREATDDSSAYPNIDEDELLNTQCPQHLE
LRWQTEVSSSVYASPLIADINSDGKLEVVVPSFVHYLEVLEGSDGDKLPGWPAFHQSTIH
SSPLLYDIDKDGVREIGLATYNGEVLFFRVSGYLMSDKLEIPRLKVKKNWYVGLNSVPVD
RSHPDVHDDQLIQEHLMESVVRHNASSHSGNHSDSIASAVHNETHSVLEEVHHDASSHSG
NHNASSHSGNHSDSIASAVHNETHSVLEEVHHDASSHSGNHNASSHSGNHSDSIASAVHN
ETHSVLEEVHHDASSHSGNHNASSHSGNHSDSIASAVHNETHSVLEEVHHDASSHSGNHN
ASSHSGNHSDSTASAVHNETHSVVEEVHHDAFNASISLPSEVSHDNSSNMANLNNSILSS
ENEKIRNLENGTNTGRRLLEDDVSKRAEEDVQAATVENEEGLEADADSSFELFRDSDELA
DEYNYDYDDYVDEHSWDDEEFQEPEHEKVEDYVDVDAHVLCTPVIADIDNDGVSEMIVAV
SYFFDHEYYQNSEHLKELGDIEIGKYVSGGIVVFNLDTKQVKWTLQLDLSTDSENFRPYI
HSAPTVVDLDGDGNLDILVGTSYGMFYVLDHKGKVRDKFPLAMADIQGAVIAADINDDGK
IELVTTDSHGNVAAWTAQGKEIWENHLKSLVPQGPAVGDVDGDGHTDIVVPTVSGNIYVL
SGKDGSIIRPYPYRTHGRVMNQVLLVDLTKHGQKKKGLTIVTTSFDGYLYLIDGPTSCAD
VVDIGETSYSMVLADNVDGGDDLDLIVTTMNGNVFCFSTPSPHHPLKSWRSPNQGRNNAA
YRLDREGVYVTPSSRAFRDEEGKSFWIEIEIFDKYRYPSGSQAPYNVTVSLLVPGNYQGD
RTIKQNKIFNQPGKHRLMLPTVSVRTAGTVLVEMVDKNGLYFSDDFSLTFHFHYYKLLKW
LLVLPMLGMFGVLVILRPQEAMPLPSFTRNTNL*

Transcript Sequence

Transcript ID

PGSC0003DMT400052425
Transcript Infomation

pacid=37457069 locus=PGSC0003DMG400020350 ID=PGSC0003DMT400052425.v4.03 annot-version=v4.03
Sequence

ATGAAAACTAGGGTTTTTTTACTCTGTTTTCTCATCCTTTCGTCGAATTTCTCTCATTTG
CAATCGGAGGAAACGAAGACTAACAAATTCCGAGAACGAGAAGCTACAGATGATTCCAGT
GCTTATCCAAATATAGATGAGGATGAATTGCTGAATACACAATGCCCCCAGCATTTGGAG
CTAAGATGGCAGACAGAAGTTAGTTCTAGTGTGTATGCCTCGCCCTTGATAGCTGACATT
AACAGTGATGGGAAGCTTGAGGTTGTAGTTCCCTCGTTTGTTCATTACTTGGAAGTTCTG
GAAGGTTCTGATGGAGATAAACTGCCAGGATGGCCAGCTTTTCATCAATCTACCATTCAT
TCCAGTCCTTTACTGTATGACATTGACAAGGATGGAGTGAGGGAGATAGGTTTGGCCACC
TACAATGGTGAGGTGCTCTTTTTCAGGGTGTCAGGATACTTGATGTCTGATAAACTTGAG
ATTCCTCGGTTGAAGGTAAAAAAGAATTGGTATGTGGGTTTGAATTCAGTCCCTGTGGAC
CGTTCTCATCCGGATGTCCACGATGACCAACTAATCCAGGAGCATCTGATGGAATCTGTA
GTTCGTCATAATGCATCTAGTCACAGTGGCAACCATTCAGACTCTATAGCATCGGCTGTT
CACAATGAGACACATTCTGTTCTGGAAGAAGTCCACCATGATGCATCTAGTCACAGTGGC
AACCATAATGCATCTAGTCACAGTGGCAACCATTCAGACTCTATAGCATCGGCTGTTCAC
AATGAGACACATTCTGTTCTGGAAGAAGTCCACCATGATGCATCTAGTCACAGTGGCAAC
CATAATGCATCTAGTCACAGTGGCAACCATTCAGACTCTATAGCATCGGCTGTTCACAAT
GAGACACATTCTGTTCTGGAAGAAGTCCACCATGATGCATCTAGTCACAGTGGCAACCAT
AATGCATCTAGTCACAGTGGCAACCATTCAGACTCTATAGCATCGGCTGTTCACAATGAG
ACACATTCTGTTCTGGAAGAAGTCCACCATGATGCATCTAGTCACAGTGGCAACCATAAT
GCATCTAGTCACAGTGGCAACCATTCAGACTCTACAGCATCGGCTGTTCACAATGAGACA
CATTCTGTTGTGGAAGAAGTCCACCATGATGCATTTAATGCTTCAATATCTTTGCCATCA
GAAGTTTCACATGACAACTCTTCTAACATGGCTAACTTAAACAATAGTATTCTGAGTTCT
GAAAATGAGAAAATTAGGAATTTGGAAAATGGAACCAATACCGGAAGAAGGCTTCTTGAA
GATGACGTGTCAAAAAGAGCTGAGGAAGATGTTCAAGCTGCAACTGTGGAAAATGAAGAA
GGTCTAGAAGCGGATGCTGATTCATCTTTTGAGTTATTTCGTGACAGTGATGAGTTGGCA
GATGAGTATAATTACGATTATGATGATTACGTTGATGAGCACTCGTGGGATGATGAAGAA
TTTCAGGAGCCAGAGCATGAGAAAGTAGAGGATTATGTGGATGTTGATGCTCATGTTTTG
TGTACGCCTGTCATAGCAGACATTGACAATGATGGGGTGTCAGAGATGATTGTTGCAGTT
TCCTATTTCTTTGACCATGAGTACTACCAAAATTCGGAGCATTTGAAGGAGCTTGGAGAC
ATTGAAATTGGAAAATATGTATCTGGTGGTATTGTTGTTTTTAATCTAGATACCAAGCAA
GTTAAATGGACTCTACAGCTGGACCTAAGTACTGACTCAGAGAACTTCCGTCCCTACATC
CACTCTGCCCCTACGGTAGTTGATTTGGATGGTGATGGAAATTTGGACATTCTAGTTGGG
ACCTCTTATGGAATGTTTTATGTCTTGGATCACAAGGGGAAAGTGAGGGATAAGTTTCCT
CTCGCAATGGCTGACATCCAAGGAGCAGTAATTGCAGCTGATATAAATGATGATGGCAAG
ATTGAACTAGTTACTACAGATTCACATGGCAATGTTGCTGCATGGACTGCACAGGGCAAA
GAAATTTGGGAAAATCATCTTAAAAGCCTTGTTCCTCAGGGACCTGCCGTTGGTGATGTG
GATGGGGATGGCCATACCGATATCGTTGTTCCAACAGTTTCAGGGAATATTTATGTTCTG
AGTGGCAAGGATGGCTCCATTATACGCCCATATCCTTACAGGACTCATGGTAGAGTGATG
AATCAAGTTCTTCTTGTTGACTTGACCAAACATGGGCAGAAGAAAAAAGGGCTTACAATC
GTTACTACATCATTTGATGGTTACTTGTACCTCATAGATGGACCTACATCATGTGCTGAT
GTTGTAGATATTGGTGAAACATCATACAGCATGGTCTTGGCTGACAATGTTGATGGTGGA
GATGACCTCGATCTTATTGTGACTACCATGAATGGCAATGTCTTCTGTTTCTCGACACCT
TCTCCACATCATCCCCTCAAGTCATGGAGATCACCTAACCAAGGGAGAAATAATGCTGCA
TATCGATTAGATCGTGAGGGAGTCTATGTTACTCCATCATCAAGAGCTTTCCGTGATGAA
GAAGGCAAAAGCTTTTGGATTGAAATAGAAATTTTTGATAAATACAGATATCCATCTGGG
TCTCAAGCTCCATATAATGTCACGGTGAGTTTGTTAGTACCTGGCAATTACCAAGGTGAT
AGAACTATTAAGCAAAATAAGATATTTAATCAACCTGGAAAACATCGGCTTATGCTCCCA
ACTGTTTCTGTGAGAACTGCTGGTACAGTGTTGGTGGAGATGGTTGACAAGAATGGGCTA
TATTTCTCTGATGATTTCTCCTTGACATTCCATTTTCATTATTATAAGCTGTTAAAATGG
CTTCTCGTTCTTCCTATGCTGGGGATGTTTGGTGTGCTTGTCATTCTTCGTCCGCAGGAG
GCCATGCCATTACCATCATTTACGCGAAACACCAACCTCTGA