Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400052416
CDS Infomation

pacid=37458318 polypeptide=PGSC0003DMP400035342 locus=PGSC0003DMG400020347 ID=PGSC0003DMT400052416.v4.03 annot-version=v4.03
Sequence

ATGAATCCCACCACTGTAGACCCAACACAACCACCGCCACAGCCACCTCAGGTGACACAA
CCACCGCGTTCTTCCTTCAGTTGTGACCGACACCCAGATGAACAATTCACCGGTTTTTGT
CCTGAATGTCTCTGTGAACGACTCACCACCTTAGATAACAACAGTAACAATAATAACCCT
TCTTCTTCTTCTCGACGTCCTTCTACTTCATCATCTTCTGCTGCTGCTGCTATTAAATCC
CTTTTCTCTAAACCTTCTGTTTCTTCTACTTCTTCTTCGGTTGTTGTTAATAATCTTCCT
CCTAAACCTGTTAAACCCACTTCGTTTTTTCCTGAGCTTCGTCGGACTAAGTCGTTTTCT
GCTTCGAAAAACGAGGCGTTGGGGTTTAATACTTCTGCTTTTGAACCCCAAAGGAAATCC
TGTGATGTTCGTGGTCGTAATACCCTTTGGTCTTTGTTTTCTATCGACGACGAAACGAAA
ACTGGGAAACCCACTTGTTCACTAAATCAAAATGCGAATGATATTGGGGATGGGTTTGTT
GGTAGACCGGTTAAAGAGGAGGAGGAGGAGGAAGAAGAAGACGAATTCGAAAATGGTGAA
GAGTTTGGAAATGTGGCTGATGAAATAATTGAAGAGGAGTTACCGGTGGAACCGGAGATT
GTGGTGGAAGAGGAGTTGAGTGGTGATATATTGAAGCCGATGAAAGATCATATAGATCTT
GATTCGCAGGGCAAAAAGGGTTCAGGGGGGAAGGATTTGAAGGAAATTGCAGGGAGTTTT
TGGTCAGCTGCATCGGTTTTTAGTAAGAAATGGCATAACTGGAGGAAAAAACAGAAGCTG
AAGAAGAGAAACAATGGCGAAAACTCGGGTACATTGCCTGTAGGAAAACCCATTTCAAGG
CGTTATAGGGATACCCAATCGGAGATAGCTGATTATGGTTTTGGGAGAAGGTCCTGTGAT
ACTGATCCTCGGTTTTCACTCGATGCTGGAAGGATGAGTTTAGATGATCCAAGGTATTCT
TTCGATGAACCCCGTGCTTCTTGGGATGGTTATTTGATTGGTAGGAGTTTTCCTAGAATG
CCACCAATGGTTTCAGTGATAGAAGATGCACCAGTTGTGCATATTCCGCGGTCTGATAAC
CAAATTCCGGTTGAGGAACCGCGTCTTTCGATGACTTCTATCAATGAGGATGAATCAGTG
CCTGGAGGGTCTACTCAAACTAAAGAGTATTACTCGGATTCATCTTCGAGGAGAAGGAAG
AGTCTTGATAGGTCTAATTCAATTAGGAAGACTGCAGCTGCTGTTGTGGCAGAAATGGAT
GAAATGAAATCAGTATCTAATGCTAAAGTATTGCCTGCTATGGGTGATCAATTTCTTGGA
GCCAAAGTGTTGGTTGGTGAGAGGGATTCGAATTCAAATTCCAATTCTTTAAGAGATGAC
TGCTCTGAGACATTTGAATTGACAGGTTTTAGGGATAATAGTTCAGTGATTGGTAACGGG
GAGCGAAAGGATTCGAAAAAGTCAAGGAGGTGGGCCTGGAATTTATGGGGTTTTATAAAT
AGGAGAGTTAGTGGGAACAAAGATGAGGAAGATGATAGGTATAGTAGATCAAATGGAGTG
GAGAGGTCATTTTCAGAATCGTGGCAAGACTTGAGGACAAATGGTGATGTAAGAGGTGGT
GTTAATAGGAAGGTATTCAGGAGTAACAGCAGTGTTAGCTGGAGAAACTCGACCGGTATT
GGTGGATCATTTGGGAGTATGAGGAAATCTAGTGTTGAGATGAATGGACATGTAAAGAAG
AAAAGAGATGATATCGTGTTGGAGAGGAATCGAAGTGCTAGGTATTCACCTAATCATCTT
GATAATGGACTCTTGCGGTTCTACTTGGCACCCATGAGAGGCAGCCGAAGAGGTTTACCT
GGAAAAAGTAGGCCAAATGGCTCACATTCGATCGCGAGGAGCTTACTTCGACTGTACTGA

Peptide Sequence

PEP ID

PGSC0003DMP400035342
PEP Infomation

pacid=37458318 transcript=PGSC0003DMT400052416 locus=PGSC0003DMG400020347 ID=PGSC0003DMT400052416.v4.03 annot-version=v4.03
Sequence

MNPTTVDPTQPPPQPPQVTQPPRSSFSCDRHPDEQFTGFCPECLCERLTTLDNNSNNNNP
SSSSRRPSTSSSSAAAAIKSLFSKPSVSSTSSSVVVNNLPPKPVKPTSFFPELRRTKSFS
ASKNEALGFNTSAFEPQRKSCDVRGRNTLWSLFSIDDETKTGKPTCSLNQNANDIGDGFV
GRPVKEEEEEEEEDEFENGEEFGNVADEIIEEELPVEPEIVVEEELSGDILKPMKDHIDL
DSQGKKGSGGKDLKEIAGSFWSAASVFSKKWHNWRKKQKLKKRNNGENSGTLPVGKPISR
RYRDTQSEIADYGFGRRSCDTDPRFSLDAGRMSLDDPRYSFDEPRASWDGYLIGRSFPRM
PPMVSVIEDAPVVHIPRSDNQIPVEEPRLSMTSINEDESVPGGSTQTKEYYSDSSSRRRK
SLDRSNSIRKTAAAVVAEMDEMKSVSNAKVLPAMGDQFLGAKVLVGERDSNSNSNSLRDD
CSETFELTGFRDNSSVIGNGERKDSKKSRRWAWNLWGFINRRVSGNKDEEDDRYSRSNGV
ERSFSESWQDLRTNGDVRGGVNRKVFRSNSSVSWRNSTGIGGSFGSMRKSSVEMNGHVKK
KRDDIVLERNRSARYSPNHLDNGLLRFYLAPMRGSRRGLPGKSRPNGSHSIARSLLRLY*

Transcript Sequence

Transcript ID

PGSC0003DMT400052416
Transcript Infomation

pacid=37458318 locus=PGSC0003DMG400020347 ID=PGSC0003DMT400052416.v4.03 annot-version=v4.03
Sequence

ATGAATCCCACCACTGTAGACCCAACACAACCACCGCCACAGCCACCTCAGGTGACACAA
CCACCGCGTTCTTCCTTCAGTTGTGACCGACACCCAGATGAACAATTCACCGGTTTTTGT
CCTGAATGTCTCTGTGAACGACTCACCACCTTAGATAACAACAGTAACAATAATAACCCT
TCTTCTTCTTCTCGACGTCCTTCTACTTCATCATCTTCTGCTGCTGCTGCTATTAAATCC
CTTTTCTCTAAACCTTCTGTTTCTTCTACTTCTTCTTCGGTTGTTGTTAATAATCTTCCT
CCTAAACCTGTTAAACCCACTTCGTTTTTTCCTGAGCTTCGTCGGACTAAGTCGTTTTCT
GCTTCGAAAAACGAGGCGTTGGGGTTTAATACTTCTGCTTTTGAACCCCAAAGGAAATCC
TGTGATGTTCGTGGTCGTAATACCCTTTGGTCTTTGTTTTCTATCGACGACGAAACGAAA
ACTGGGAAACCCACTTGTTCACTAAATCAAAATGCGAATGATATTGGGGATGGGTTTGTT
GGTAGACCGGTTAAAGAGGAGGAGGAGGAGGAAGAAGAAGACGAATTCGAAAATGGTGAA
GAGTTTGGAAATGTGGCTGATGAAATAATTGAAGAGGAGTTACCGGTGGAACCGGAGATT
GTGGTGGAAGAGGAGTTGAGTGGTGATATATTGAAGCCGATGAAAGATCATATAGATCTT
GATTCGCAGGGCAAAAAGGGTTCAGGGGGGAAGGATTTGAAGGAAATTGCAGGGAGTTTT
TGGTCAGCTGCATCGGTTTTTAGTAAGAAATGGCATAACTGGAGGAAAAAACAGAAGCTG
AAGAAGAGAAACAATGGCGAAAACTCGGGTACATTGCCTGTAGGAAAACCCATTTCAAGG
CGTTATAGGGATACCCAATCGGAGATAGCTGATTATGGTTTTGGGAGAAGGTCCTGTGAT
ACTGATCCTCGGTTTTCACTCGATGCTGGAAGGATGAGTTTAGATGATCCAAGGTATTCT
TTCGATGAACCCCGTGCTTCTTGGGATGGTTATTTGATTGGTAGGAGTTTTCCTAGAATG
CCACCAATGGTTTCAGTGATAGAAGATGCACCAGTTGTGCATATTCCGCGGTCTGATAAC
CAAATTCCGGTTGAGGAACCGCGTCTTTCGATGACTTCTATCAATGAGGATGAATCAGTG
CCTGGAGGGTCTACTCAAACTAAAGAGTATTACTCGGATTCATCTTCGAGGAGAAGGAAG
AGTCTTGATAGGTCTAATTCAATTAGGAAGACTGCAGCTGCTGTTGTGGCAGAAATGGAT
GAAATGAAATCAGTATCTAATGCTAAAGTATTGCCTGCTATGGGTGATCAATTTCTTGGA
GCCAAAGTGTTGGTTGGTGAGAGGGATTCGAATTCAAATTCCAATTCTTTAAGAGATGAC
TGCTCTGAGACATTTGAATTGACAGGTTTTAGGGATAATAGTTCAGTGATTGGTAACGGG
GAGCGAAAGGATTCGAAAAAGTCAAGGAGGTGGGCCTGGAATTTATGGGGTTTTATAAAT
AGGAGAGTTAGTGGGAACAAAGATGAGGAAGATGATAGGTATAGTAGATCAAATGGAGTG
GAGAGGTCATTTTCAGAATCGTGGCAAGACTTGAGGACAAATGGTGATGTAAGAGGTGGT
GTTAATAGGAAGGTATTCAGGAGTAACAGCAGTGTTAGCTGGAGAAACTCGACCGGTATT
GGTGGATCATTTGGGAGTATGAGGAAATCTAGTGTTGAGATGAATGGACATGTAAAGAAG
AAAAGAGATGATATCGTGTTGGAGAGGAATCGAAGTGCTAGGTATTCACCTAATCATCTT
GATAATGGACTCTTGCGGTTCTACTTGGCACCCATGAGAGGCAGCCGAAGAGGTTTACCT
GGAAAAAGTAGGCCAAATGGCTCACATTCGATCGCGAGGAGCTTACTTCGACTGTACTGA