Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400052361
CDS Infomation

pacid=37457232 polypeptide=PGSC0003DMP400035297 locus=PGSC0003DMG400020325 ID=PGSC0003DMT400052361.v4.03 annot-version=v4.03
Sequence

ATGGCTTCAACTTCACATCCTCCCGTGGCATTCAGTGGAAGTTTGGCTTCTAAAACTTCA
GCTTCAGACCTTCTTCGTAGCTCAAGAAATGGTGTTTGTGGTGTGCCATTGAAAGCCTTA
GGGAGAGCACGATTGGGTTCTAAGAAGAGAGATTTTACAATCTCTGCAAAGGTTAGAAAG
GTAAAGAAGCATGAGTACCCCTGGCCAGAGGATCCTGACCTTAATGTCAAGGGTGGAGTC
CTCAGTCACTTATCACCTTTCAAGCCATTGAAAGAAAGACAAAAGCCGGTGACATTGGAT
TTTGAGAAACCTCTTATGGATCTGCAGAAAAAAATCATTGATGTTCAAAAGATGGCAAAT
GAAACTGGGTTGGATTTCAGTGATCAAATTATCTCACTTGAGAACAAATACCAACAGGCT
CTAAAAGATCTATACACACATCTGACTCCTATACAAAGAGTGAATATTGCAAGGCATCCT
AACAGGCCAACTTTCCTTGATCATATCTTTAATATTACTGAGAAGTTTGTGGAGCTTCAT
GGTGACAGAGCGGGGTATGACGATCCTGCCATTGTCACTGGAATTGGCACAATAAATGGT
AGAAGCTATATGTTCATGGGTCATCAAAAAGGACGAAACACAAAGGAGAACATACAACGT
AACTTTGGGATGCCTACTCCCCATGGTTATAGGAAGGCTCTGCGGATGATGTACTATGCT
GATCATCACGGATTCCCGATCATCACTTTCATTGACACACCAGGGGCATATGCTGATCTC
AAATCAGAGGAACTAGGCCAAGGAGAAGCCATAGCTCATAACTTGAGGACTATGTTTGGT
TTGAAAGTACCAATTATTTCTATTGTTATGGGAGAAGGGGGTTCTGGTGGAGCTCTGGCT
ATTGGTTGTGCTAATAAATTGTTGATGCTTGAAAATGCCGTCTTCTATGTTGCCAGCCCA
GAAGCATGTGCAGCAATTTTATGGAAGACCGCAAAAGCTTCTCCCAAGGCAGCTGAGAAA
CTCAAGATAACTGCTCAAGAGCTGTCCAGACTTCAAATTGCCGATGGTTCCATCCCTGAG
CCTCTTGGTGGTGCACATGCTGATCCGTATTGGACTTCACAGCAGATAAAAATTGCAATT
GAAGAATCAATGGATGAACTTACGAAAATGGACACCCAAGAGTTGTTAAGGCACAGGATG
CTTAAGTTCCGAAAACTTGGTGGCTTCCAGGAGGGAGTTCCCATTGACCCAAAAAGGAAG
GTCAACATGAAAAAGAAAGAAGAACCTCTTCTTCCACCTGGAATTCCGGATGTGGAGTTA
TTGGATGAGGTTGAAAAATTGAAGCAAGAGATCCAGAAAGCAAAGGAATCAACTGGGAAG
ATTCCAGACACAGGCCTGAATGAGATGATAGAAAAATTAAGAAGAGAAATTGATTTTGAA
TTTTCTGAGGCTGCTAAAGCTTTAGGTTTGGAGGAAAAACTTGTCATGGCACGAGAAGAA
TTTGCAAAAACAAGGAACTCAAATGACCAGGCAATGCATCCTGTTCTGAAGGAAAAGCTT
GACCAGATTAAGGACGAATTCAACAGAAACATTTCTGCTGCTCCAAATCATGCTAGCCTA
ACGAATAAGCTTGAGATGTTGCAAGAAATGTCTAAAGCCCAGAAACTCTCAGAGAAAAAT
AGCAAGGTAAACAAATTGAAGGAGGAGATCAATAAGAGGTTAAAAGAAGTCATGAACCGC
CCAGATTTGAAGGAGAAGATGGATGCATTGAAGGCTGAAATCAAGAGTACCGGTGTATCG
AGAGTTATGGATCTAGACCAGGGGATAAAGGAGAAACTTGTGCAACTGAAGGATGAAATG
GATACGGAATTTTCTGGTGTTTTCGAATCTCTAGGCTTGAACGTCAACCCAGCATTACTT
CCTGATGCCAAGAGAAGAATTGATGAATTTAACAATGAAATTACAACGGTTATGGAAGAC
CTCGTGAACTCCACAGATTTGAAAAACAAGATTGAATTGTTAAAGATGGAGGTAGCGAAG
GCTGGAAAGACAGCAGATGCTGAGTCAAAGGCAAAAATTCAGGCCTTAGAACAGCAAATA
AAGCAAAGTCTTGCACAGGCTATGAGTTTTCCAGAGTTAAAGCAGAAACACGAGAAGCTG
AAGGAAGAGGTTGTGGAAACCGTTGAATCCCTTGAAGGATCCAATGGAAGTTTGCTAGCA
GATAACGGTGGTGCCAATTCAGGAGTAGGAGTAAATGTAGATGCAAACCGTAGCTTTGCC
TGA

Peptide Sequence

PEP ID

PGSC0003DMP400035297
PEP Infomation

pacid=37457232 transcript=PGSC0003DMT400052361 locus=PGSC0003DMG400020325 ID=PGSC0003DMT400052361.v4.03 annot-version=v4.03
Sequence

MASTSHPPVAFSGSLASKTSASDLLRSSRNGVCGVPLKALGRARLGSKKRDFTISAKVRK
VKKHEYPWPEDPDLNVKGGVLSHLSPFKPLKERQKPVTLDFEKPLMDLQKKIIDVQKMAN
ETGLDFSDQIISLENKYQQALKDLYTHLTPIQRVNIARHPNRPTFLDHIFNITEKFVELH
GDRAGYDDPAIVTGIGTINGRSYMFMGHQKGRNTKENIQRNFGMPTPHGYRKALRMMYYA
DHHGFPIITFIDTPGAYADLKSEELGQGEAIAHNLRTMFGLKVPIISIVMGEGGSGGALA
IGCANKLLMLENAVFYVASPEACAAILWKTAKASPKAAEKLKITAQELSRLQIADGSIPE
PLGGAHADPYWTSQQIKIAIEESMDELTKMDTQELLRHRMLKFRKLGGFQEGVPIDPKRK
VNMKKKEEPLLPPGIPDVELLDEVEKLKQEIQKAKESTGKIPDTGLNEMIEKLRREIDFE
FSEAAKALGLEEKLVMAREEFAKTRNSNDQAMHPVLKEKLDQIKDEFNRNISAAPNHASL
TNKLEMLQEMSKAQKLSEKNSKVNKLKEEINKRLKEVMNRPDLKEKMDALKAEIKSTGVS
RVMDLDQGIKEKLVQLKDEMDTEFSGVFESLGLNVNPALLPDAKRRIDEFNNEITTVMED
LVNSTDLKNKIELLKMEVAKAGKTADAESKAKIQALEQQIKQSLAQAMSFPELKQKHEKL
KEEVVETVESLEGSNGSLLADNGGANSGVGVNVDANRSFA*

Transcript Sequence

Transcript ID

PGSC0003DMT400052361
Transcript Infomation

pacid=37457232 locus=PGSC0003DMG400020325 ID=PGSC0003DMT400052361.v4.03 annot-version=v4.03
Sequence

ATGGCTTCAACTTCACATCCTCCCGTGGCATTCAGTGGAAGTTTGGCTTCTAAAACTTCA
GCTTCAGACCTTCTTCGTAGCTCAAGAAATGGTGTTTGTGGTGTGCCATTGAAAGCCTTA
GGGAGAGCACGATTGGGTTCTAAGAAGAGAGATTTTACAATCTCTGCAAAGGTTAGAAAG
GTAAAGAAGCATGAGTACCCCTGGCCAGAGGATCCTGACCTTAATGTCAAGGGTGGAGTC
CTCAGTCACTTATCACCTTTCAAGCCATTGAAAGAAAGACAAAAGCCGGTGACATTGGAT
TTTGAGAAACCTCTTATGGATCTGCAGAAAAAAATCATTGATGTTCAAAAGATGGCAAAT
GAAACTGGGTTGGATTTCAGTGATCAAATTATCTCACTTGAGAACAAATACCAACAGGCT
CTAAAAGATCTATACACACATCTGACTCCTATACAAAGAGTGAATATTGCAAGGCATCCT
AACAGGCCAACTTTCCTTGATCATATCTTTAATATTACTGAGAAGTTTGTGGAGCTTCAT
GGTGACAGAGCGGGGTATGACGATCCTGCCATTGTCACTGGAATTGGCACAATAAATGGT
AGAAGCTATATGTTCATGGGTCATCAAAAAGGACGAAACACAAAGGAGAACATACAACGT
AACTTTGGGATGCCTACTCCCCATGGTTATAGGAAGGCTCTGCGGATGATGTACTATGCT
GATCATCACGGATTCCCGATCATCACTTTCATTGACACACCAGGGGCATATGCTGATCTC
AAATCAGAGGAACTAGGCCAAGGAGAAGCCATAGCTCATAACTTGAGGACTATGTTTGGT
TTGAAAGTACCAATTATTTCTATTGTTATGGGAGAAGGGGGTTCTGGTGGAGCTCTGGCT
ATTGGTTGTGCTAATAAATTGTTGATGCTTGAAAATGCCGTCTTCTATGTTGCCAGCCCA
GAAGCATGTGCAGCAATTTTATGGAAGACCGCAAAAGCTTCTCCCAAGGCAGCTGAGAAA
CTCAAGATAACTGCTCAAGAGCTGTCCAGACTTCAAATTGCCGATGGTTCCATCCCTGAG
CCTCTTGGTGGTGCACATGCTGATCCGTATTGGACTTCACAGCAGATAAAAATTGCAATT
GAAGAATCAATGGATGAACTTACGAAAATGGACACCCAAGAGTTGTTAAGGCACAGGATG
CTTAAGTTCCGAAAACTTGGTGGCTTCCAGGAGGGAGTTCCCATTGACCCAAAAAGGAAG
GTCAACATGAAAAAGAAAGAAGAACCTCTTCTTCCACCTGGAATTCCGGATGTGGAGTTA
TTGGATGAGGTTGAAAAATTGAAGCAAGAGATCCAGAAAGCAAAGGAATCAACTGGGAAG
ATTCCAGACACAGGCCTGAATGAGATGATAGAAAAATTAAGAAGAGAAATTGATTTTGAA
TTTTCTGAGGCTGCTAAAGCTTTAGGTTTGGAGGAAAAACTTGTCATGGCACGAGAAGAA
TTTGCAAAAACAAGGAACTCAAATGACCAGGCAATGCATCCTGTTCTGAAGGAAAAGCTT
GACCAGATTAAGGACGAATTCAACAGAAACATTTCTGCTGCTCCAAATCATGCTAGCCTA
ACGAATAAGCTTGAGATGTTGCAAGAAATGTCTAAAGCCCAGAAACTCTCAGAGAAAAAT
AGCAAGGTAAACAAATTGAAGGAGGAGATCAATAAGAGGTTAAAAGAAGTCATGAACCGC
CCAGATTTGAAGGAGAAGATGGATGCATTGAAGGCTGAAATCAAGAGTACCGGTGTATCG
AGAGTTATGGATCTAGACCAGGGGATAAAGGAGAAACTTGTGCAACTGAAGGATGAAATG
GATACGGAATTTTCTGGTGTTTTCGAATCTCTAGGCTTGAACGTCAACCCAGCATTACTT
CCTGATGCCAAGAGAAGAATTGATGAATTTAACAATGAAATTACAACGGTTATGGAAGAC
CTCGTGAACTCCACAGATTTGAAAAACAAGATTGAATTGTTAAAGATGGAGGTAGCGAAG
GCTGGAAAGACAGCAGATGCTGAGTCAAAGGCAAAAATTCAGGCCTTAGAACAGCAAATA
AAGCAAAGTCTTGCACAGGCTATGAGTTTTCCAGAGTTAAAGCAGAAACACGAGAAGCTG
AAGGAAGAGGTTGTGGAAACCGTTGAATCCCTTGAAGGATCCAATGGAAGTTTGCTAGCA
GATAACGGTGGTGCCAATTCAGGAGTAGGAGTAAATGTAGATGCAAACCGTAGCTTTGCC
TGA