Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400052338
CDS Infomation

pacid=37455491 polypeptide=PGSC0003DMP400035279 locus=PGSC0003DMG400020316 ID=PGSC0003DMT400052338.v4.03 annot-version=v4.03
Sequence

ATGGGAAAAGCATCCAGGGACAAGAGGGATATTTACTACCGGAAAGCAAAGGAAGAAGGG
TGGCGTGCACGAAGTGCCTTCAAGCTCCTTCAGATAGATGAGGAGTTTAATATCTTTGAA
GGTGTGAAGCGCGTTGTGGATTTGTGTGCTGCTCCAGGCAGCTGGAGTCAGGTTTTAAGC
CGGAAGTTATATCTCCCAGCAAAGCTGTCACCGGGTACCAAGGACAATGATCCACCACTT
ATCGTGGCTATTGACTTACAGCCTATGGCTCCGATTGAAGGTGTTATTCAAGTACAGGGT
GATATAACAAATGCTAAAACAGCTGAAGTGGTTATTAGACATTTTGATGGATGCAAGGCT
GACCTTGTTGTCTGTGATGGTGCACCTGATGTAACGGGACTTCATGACATGGATGAATTT
GTTCAATCCCAACTGATATTGGCGGGCCTAACCATAGTCACTCACATACTAAAAGAAGGC
GGAAAGTTCATAGCAAAAATTTTTCGAGGAAAAGACACAAGTCTCCTTTACTGTCAACTA
AAACTATTTTTCACGGAAGTGACTTTTGCTAAGCCAAAAAGTAGTCGCAATTCTAGCATA
GAGGCATTTGCAGTCTGTGAAAACTACTCTCCACCTGAAGGATTCAATGAGAAAGACCTA
CATCGCCTTCTTGAACAAGTTGGAAGTCCATCAGGCACTGAGGACCTAGATTGCAGTAGT
GGATGGCTTGAAGGTCCTAATAAGGTGTATATCCCATTTCTGGCTTGTGGAGACCTGAGT
GGATATGATTCAGATCGTTCATATCCGCTTCCTAAATCTGCAGATGGAACCTATCAATGT
TTAGATCCTGTACAACCTCCGATCGCACCTCCGTATAAACGAGCTCTTGAAATGAAAAAA
GCTTCAAGTCAAGGAATCCATAATCTGGACAAGCTTTCTCTTGGCCCCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400035279
PEP Infomation

pacid=37455491 transcript=PGSC0003DMT400052338 locus=PGSC0003DMG400020316 ID=PGSC0003DMT400052338.v4.03 annot-version=v4.03
Sequence

MGKASRDKRDIYYRKAKEEGWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLS
RKLYLPAKLSPGTKDNDPPLIVAIDLQPMAPIEGVIQVQGDITNAKTAEVVIRHFDGCKA
DLVVCDGAPDVTGLHDMDEFVQSQLILAGLTIVTHILKEGGKFIAKIFRGKDTSLLYCQL
KLFFTEVTFAKPKSSRNSSIEAFAVCENYSPPEGFNEKDLHRLLEQVGSPSGTEDLDCSS
GWLEGPNKVYIPFLACGDLSGYDSDRSYPLPKSADGTYQCLDPVQPPIAPPYKRALEMKK
ASSQGIHNLDKLSLGP*

Transcript Sequence

Transcript ID

PGSC0003DMT400052338
Transcript Infomation

pacid=37455491 locus=PGSC0003DMG400020316 ID=PGSC0003DMT400052338.v4.03 annot-version=v4.03
Sequence

ATGGGAAAAGCATCCAGGGACAAGAGGGATATTTACTACCGGAAAGCAAAGGAAGAAGGG
TGGCGTGCACGAAGTGCCTTCAAGCTCCTTCAGATAGATGAGGAGTTTAATATCTTTGAA
GGTGTGAAGCGCGTTGTGGATTTGTGTGCTGCTCCAGGCAGCTGGAGTCAGGTTTTAAGC
CGGAAGTTATATCTCCCAGCAAAGCTGTCACCGGGTACCAAGGACAATGATCCACCACTT
ATCGTGGCTATTGACTTACAGCCTATGGCTCCGATTGAAGGTGTTATTCAAGTACAGGGT
GATATAACAAATGCTAAAACAGCTGAAGTGGTTATTAGACATTTTGATGGATGCAAGGCT
GACCTTGTTGTCTGTGATGGTGCACCTGATGTAACGGGACTTCATGACATGGATGAATTT
GTTCAATCCCAACTGATATTGGCGGGCCTAACCATAGTCACTCACATACTAAAAGAAGGC
GGAAAGTTCATAGCAAAAATTTTTCGAGGAAAAGACACAAGTCTCCTTTACTGTCAACTA
AAACTATTTTTCACGGAAGTGACTTTTGCTAAGCCAAAAAGTAGTCGCAATTCTAGCATA
GAGGCATTTGCAGTCTGTGAAAACTACTCTCCACCTGAAGGATTCAATGAGAAAGACCTA
CATCGCCTTCTTGAACAAGTTGGAAGTCCATCAGGCACTGAGGACCTAGATTGCAGTAGT
GGATGGCTTGAAGGTCCTAATAAGGTGTATATCCCATTTCTGGCTTGTGGAGACCTGAGT
GGATATGATTCAGATCGTTCATATCCGCTTCCTAAATCTGCAGATGGAACCTATCAATGT
TTAGATCCTGTACAACCTCCGATCGCACCTCCGTATAAACGAGCTCTTGAAATGAAAAAA
GCTTCAAGTCAAGGAATCCATAATCTGGACAAGCTTTCTCTTGGCCCCTGA