Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400052335
CDS Infomation

pacid=37458576 polypeptide=PGSC0003DMP400035276 locus=PGSC0003DMG400020315 ID=PGSC0003DMT400052335.v4.03 annot-version=v4.03
Sequence

ATGGGTGCTCTTCCCCATTTTGAACCAATCTCAAAATATAACAAAGAAATTAATAGATCA
AATCAAACAATTGCATCTGATTTAGATGGAACACTCTTAATATCAACAAGTTCATTTCCT
TATTTCTTTCTTATTGCCTTAGAAGCTGGTAGTCTCATAAGAGCATTACTACTTCTATTA
TTTGTTCCAATTATCTACTTTATTTACATATTCATCTCAGAATCAATTGCAATTGAAACC
CTAATCTTCATATCCTTTGCTGGATTAAAGATTAAAGACATCGAAATCGTCTCTAGGGCT
GTTTTACCTAAGTTTTATTCTGAAGATGTACATCCACATACTTGGAAAGTGTTTAATTCT
TTTGGGAAGAGATATATTGTTACCGCGAATCCAAGAATTATGGTTGAACATTTTGCAAAA
ACTTTCTTAGGTGTTGATAAAGTTCTTGGAACTGAATTACATGTTTCTAAATCTGGACGT
GCCACTGGATTTGTAACAAAACCTGGTGTTCTTGTTGGACAATATAAAAGGGATGCTCTT
ATTAAAGAATTTGGAACAAATGTACCTCATGTAGGTCTTGGAGATAGAGACACTGATCGC
GATTTCATCTCCATATGCAAGGAAGGTTACATGGTCCCAAGATCAAAAATAGAACCCCTA
GCAAGAAATAAACTCCTAAGTCCAGTAATTTTCCATGAAGGTCGTTTTGTACAAAGACCT
ACACCACTTATGGCACTTTTAACATTTTTATGGATGCCAATAGGAATAATTCTCTCAATT
CTTAGAGTATATCTTAATATTCCTTTACCAGAAAAAATTGTTAGATATAATTATATTATC
CTTGGTATTAAACTTATTGTCAAAGGTACACCCCCACCACCCCCTAAAAATGGCCAACGT
GGTGTACTTTTTGTGTGCAACCATAGAACTATACTAGACCCCGTTGTTACTGCTGTTGCA
CTAGGTAGAAAAATAAGTTGTGTTACATATAGTATTAGTAAATTTTCTGAGATGATATCG
CCGATAAAAGCCGTCGCGTTATCGAGAGAGAGGGAGAAAGATGCAGCACATATTAAGCAA
TTACTTGAAGAAGGTGATTTGGTTATATGTCCTGAAGGTACAACATGTAGGGAACCGTTT
TTATTGAGATTTAGCGCACTTTTTGCTGAATTGACTGATAGAATTGTACCTGTGGCTATT
AACACTAAGCAAAGTGTGTTTAATGGGACAACTGTCAGAGGGTACAAATTATTGGATCCT
TATTTTGTTTTCATGAATCCAAGACCAACTTATGAGATTACATTCTTGAATCAACTCCCT
CCTGAACTTAATTGTACTAACGGAGGGAAATCCGCAATTGAAGTTGCAAATTATATTCAA
AAGGTACTTGGTGGTACATTGGGATTCGAGTGTACTAATTTGACAAGGAGGGATAAGTAC
GCAATACTTGCTGGAACTGACGGTCGCGTTGCAATAAAGGACAAGGAGAAGGAGAAGGAG
AAGGAGAAGGAGAAAATGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400035276
PEP Infomation

pacid=37458576 transcript=PGSC0003DMT400052335 locus=PGSC0003DMG400020315 ID=PGSC0003DMT400052335.v4.03 annot-version=v4.03
Sequence

MGALPHFEPISKYNKEINRSNQTIASDLDGTLLISTSSFPYFFLIALEAGSLIRALLLLL
FVPIIYFIYIFISESIAIETLIFISFAGLKIKDIEIVSRAVLPKFYSEDVHPHTWKVFNS
FGKRYIVTANPRIMVEHFAKTFLGVDKVLGTELHVSKSGRATGFVTKPGVLVGQYKRDAL
IKEFGTNVPHVGLGDRDTDRDFISICKEGYMVPRSKIEPLARNKLLSPVIFHEGRFVQRP
TPLMALLTFLWMPIGIILSILRVYLNIPLPEKIVRYNYIILGIKLIVKGTPPPPPKNGQR
GVLFVCNHRTILDPVVTAVALGRKISCVTYSISKFSEMISPIKAVALSREREKDAAHIKQ
LLEEGDLVICPEGTTCREPFLLRFSALFAELTDRIVPVAINTKQSVFNGTTVRGYKLLDP
YFVFMNPRPTYEITFLNQLPPELNCTNGGKSAIEVANYIQKVLGGTLGFECTNLTRRDKY
AILAGTDGRVAIKDKEKEKEKEKEKM*

Transcript Sequence

Transcript ID

PGSC0003DMT400052335
Transcript Infomation

pacid=37458576 locus=PGSC0003DMG400020315 ID=PGSC0003DMT400052335.v4.03 annot-version=v4.03
Sequence

ATGGGTGCTCTTCCCCATTTTGAACCAATCTCAAAATATAACAAAGAAATTAATAGATCA
AATCAAACAATTGCATCTGATTTAGATGGAACACTCTTAATATCAACAAGTTCATTTCCT
TATTTCTTTCTTATTGCCTTAGAAGCTGGTAGTCTCATAAGAGCATTACTACTTCTATTA
TTTGTTCCAATTATCTACTTTATTTACATATTCATCTCAGAATCAATTGCAATTGAAACC
CTAATCTTCATATCCTTTGCTGGATTAAAGATTAAAGACATCGAAATCGTCTCTAGGGCT
GTTTTACCTAAGTTTTATTCTGAAGATGTACATCCACATACTTGGAAAGTGTTTAATTCT
TTTGGGAAGAGATATATTGTTACCGCGAATCCAAGAATTATGGTTGAACATTTTGCAAAA
ACTTTCTTAGGTGTTGATAAAGTTCTTGGAACTGAATTACATGTTTCTAAATCTGGACGT
GCCACTGGATTTGTAACAAAACCTGGTGTTCTTGTTGGACAATATAAAAGGGATGCTCTT
ATTAAAGAATTTGGAACAAATGTACCTCATGTAGGTCTTGGAGATAGAGACACTGATCGC
GATTTCATCTCCATATGCAAGGAAGGTTACATGGTCCCAAGATCAAAAATAGAACCCCTA
GCAAGAAATAAACTCCTAAGTCCAGTAATTTTCCATGAAGGTCGTTTTGTACAAAGACCT
ACACCACTTATGGCACTTTTAACATTTTTATGGATGCCAATAGGAATAATTCTCTCAATT
CTTAGAGTATATCTTAATATTCCTTTACCAGAAAAAATTGTTAGATATAATTATATTATC
CTTGGTATTAAACTTATTGTCAAAGGTACACCCCCACCACCCCCTAAAAATGGCCAACGT
GGTGTACTTTTTGTGTGCAACCATAGAACTATACTAGACCCCGTTGTTACTGCTGTTGCA
CTAGGTAGAAAAATAAGTTGTGTTACATATAGTATTAGTAAATTTTCTGAGATGATATCG
CCGATAAAAGCCGTCGCGTTATCGAGAGAGAGGGAGAAAGATGCAGCACATATTAAGCAA
TTACTTGAAGAAGGTGATTTGGTTATATGTCCTGAAGGTACAACATGTAGGGAACCGTTT
TTATTGAGATTTAGCGCACTTTTTGCTGAATTGACTGATAGAATTGTACCTGTGGCTATT
AACACTAAGCAAAGTGTGTTTAATGGGACAACTGTCAGAGGGTACAAATTATTGGATCCT
TATTTTGTTTTCATGAATCCAAGACCAACTTATGAGATTACATTCTTGAATCAACTCCCT
CCTGAACTTAATTGTACTAACGGAGGGAAATCCGCAATTGAAGTTGCAAATTATATTCAA
AAGGTACTTGGTGGTACATTGGGATTCGAGTGTACTAATTTGACAAGGAGGGATAAGTAC
GCAATACTTGCTGGAACTGACGGTCGCGTTGCAATAAAGGACAAGGAGAAGGAGAAGGAG
AAGGAGAAGGAGAAAATGTAA