Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400052323
CDS Infomation

pacid=37455060 polypeptide=PGSC0003DMP400035271 locus=PGSC0003DMG400020305 ID=PGSC0003DMT400052323.v4.03 annot-version=v4.03
Sequence

ATGGCATTCATCAAAGTCCAGAAGACTAGGGCTTACTTTAAGCGTTTCCAGGTTAAATTC
AAGAGAAGGAGAGAGGGAAAGACTGACTACAGAGCCAGGAATCGCTTGATAAATCAGGAC
AAAAACAAGTACAACACTCCAAAATATCGTTTTGTTGTCCGATTTACTAATAAGGACATA
ATTGCCCAAATTGTGTCTGCTAGCATAGCTGGTGACATGATTCTTGCCTCTGCATATGCT
CGTGAGCTGCCTCAATTTGGCCTTCAAGTTGGACTCACAAATTATGCTGCTGCATACTGT
ACTGGACTTCTCTTGGCAAGACGAGTTCTCAAAAAACTCGAAATGGATGAGGAGTATCAA
GGGAACCCTGAGGCCAGTGGAGAGGATTACTCAGTTGAACCTGCTGAAAGCAGGAGACCT
TTCCGTGCTCTCTTGGATGTTGGTCTTATTAGAACTACTACTGGAAATCGTGTGTTTGGT
GCTCTCAAGGGTGCATTGGATGGTGGACTTGATATTCCTCATGGTGAGAAGAGGTTTGCT
GGATTCAGTAAAGACTCCAAGCAACTTGATGCTGATGTTCACCGCAAGTATATCTATGGT
GGCCATGTTGCAACATATATGAAGACTTTGATAGAAGATGAACCTGAGAAATATCAGTCT
CACTTTAGTGAGTACATTAAGCGGGGTCTTGAGGCTGATAATCTTGAAGAGATGTACAAG
AAGGTTCATGCTGCCATACGTGCTGAACCAAGCCCAAAGAAGTCTGAGAAGCAGCCTCCC
AAGAAGCACAAGAGGTACAATCTGAAGAAGCTGACTTATGAGGAAAGGAAGGCTAAGTTG
ATTGAAAGACTGAATGCTTTGAATTCAGCTGCTGGAAATGATGATGATGAGGATGATGAT
GAGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400035271
PEP Infomation

pacid=37455060 transcript=PGSC0003DMT400052323 locus=PGSC0003DMG400020305 ID=PGSC0003DMT400052323.v4.03 annot-version=v4.03
Sequence

MAFIKVQKTRAYFKRFQVKFKRRREGKTDYRARNRLINQDKNKYNTPKYRFVVRFTNKDI
IAQIVSASIAGDMILASAYARELPQFGLQVGLTNYAAAYCTGLLLARRVLKKLEMDEEYQ
GNPEASGEDYSVEPAESRRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHGEKRFA
GFSKDSKQLDADVHRKYIYGGHVATYMKTLIEDEPEKYQSHFSEYIKRGLEADNLEEMYK
KVHAAIRAEPSPKKSEKQPPKKHKRYNLKKLTYEERKAKLIERLNALNSAAGNDDDEDDD
E*

Transcript Sequence

Transcript ID

PGSC0003DMT400052323
Transcript Infomation

pacid=37455060 locus=PGSC0003DMG400020305 ID=PGSC0003DMT400052323.v4.03 annot-version=v4.03
Sequence

ATGGCATTCATCAAAGTCCAGAAGACTAGGGCTTACTTTAAGCGTTTCCAGGTTAAATTC
AAGAGAAGGAGAGAGGGAAAGACTGACTACAGAGCCAGGAATCGCTTGATAAATCAGGAC
AAAAACAAGTACAACACTCCAAAATATCGTTTTGTTGTCCGATTTACTAATAAGGACATA
ATTGCCCAAATTGTGTCTGCTAGCATAGCTGGTGACATGATTCTTGCCTCTGCATATGCT
CGTGAGCTGCCTCAATTTGGCCTTCAAGTTGGACTCACAAATTATGCTGCTGCATACTGT
ACTGGACTTCTCTTGGCAAGACGAGTTCTCAAAAAACTCGAAATGGATGAGGAGTATCAA
GGGAACCCTGAGGCCAGTGGAGAGGATTACTCAGTTGAACCTGCTGAAAGCAGGAGACCT
TTCCGTGCTCTCTTGGATGTTGGTCTTATTAGAACTACTACTGGAAATCGTGTGTTTGGT
GCTCTCAAGGGTGCATTGGATGGTGGACTTGATATTCCTCATGGTGAGAAGAGGTTTGCT
GGATTCAGTAAAGACTCCAAGCAACTTGATGCTGATGTTCACCGCAAGTATATCTATGGT
GGCCATGTTGCAACATATATGAAGACTTTGATAGAAGATGAACCTGAGAAATATCAGTCT
CACTTTAGTGAGTACATTAAGCGGGGTCTTGAGGCTGATAATCTTGAAGAGATGTACAAG
AAGGTTCATGCTGCCATACGTGCTGAACCAAGCCCAAAGAAGTCTGAGAAGCAGCCTCCC
AAGAAGCACAAGAGGTACAATCTGAAGAAGCTGACTTATGAGGAAAGGAAGGCTAAGTTG
ATTGAAAGACTGAATGCTTTGAATTCAGCTGCTGGAAATGATGATGATGAGGATGATGAT
GAGTGA