Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400052280
CDS Infomation

pacid=37458052 polypeptide=PGSC0003DMP400035242 locus=PGSC0003DMG400020286 ID=PGSC0003DMT400052280.v4.03 annot-version=v4.03
Sequence

ATGAGTGGAGGCGGAGAAGGAGACACATTGGAATTTACCCCTACTTGGGTGGTCGCCGCC
GTCTGCACCGTCATCGTTGCCATTTCTCTAGCCGCTGAGCGACTCATCCATTATACTGGA
AAGTATCTGAAGAAGAAGAATCAGAAGCCTTTATATGAAGCGCTACAGAAAGTTAAAGAA
GAGTTGATGCTTTTGGGGTTTATATCCCTTTTACTGACGGTGCTTCAAAGTAGCATAGTC
AAGATTTGTGTGCCTAAAGATGTGGTCATGCACTTACTACCATGTTCATTATCGGATGCC
CCTTCTCATGAATCACAACATCATCGGCGGCTGTTAGTTGAAGAAGAAGAAGCTGCTGCT
GCTGGCTATTGCACTGCAAAACATAAGGTCCCATTACTCTCTCTTGAAGCGTTGCATCAC
CTTCACATTTTCATCTTTGTCCTTGCAATTGTTCATGTGACTTTCTCTCTTCTGACAGTT
GTATTTGGAGGAGCCAAGATACGTCAATGGAAGCACTGGGAGGACAGTATTGCAAAAGCT
AATTATGAGACTGCACATGTTTTAAAACCACGGGTTACACATGTCCAGCAACACGATTTC
ATCAGGGACCGATTTGTGGGTATGGGCAAACGCTCAGCCATTTTTGGTTGGATGCACTCT
TTCTTTAAGCAGTTTTATGGTTCTGTCAGCAAGTCAGATTATGCTGCTCTGCGTTTGGGG
TTCATTATGACACATTGCAAGCAAAACCCAAAATTTAATTTTCACAAGTACATGATTCGT
GCTCTGGAAGATGATTTTAAGACTGTCGTCGGTATCAGTTGGTATCTCTGGGTATTTGTT
GTCATCTTCTTGTTTCTGAATGTTAATGGTATGCCAACTCTAACTTGGAATAGACATTTT
GACCTTGCAGCTGCTTTGAAATGTTTCAATGCTATACTAATGCAGAACAAATGGAAAAGG
GTTGTATTGGCAAGTAATAATTGGGTACCAGCAACCTTAGTGCTGTTGAAGAGAGTTGTT
CTCTTGGCAAATGGAAACTAA

Peptide Sequence

PEP ID

PGSC0003DMP400035242
PEP Infomation

pacid=37458052 transcript=PGSC0003DMT400052280 locus=PGSC0003DMG400020286 ID=PGSC0003DMT400052280.v4.03 annot-version=v4.03
Sequence

MSGGGEGDTLEFTPTWVVAAVCTVIVAISLAAERLIHYTGKYLKKKNQKPLYEALQKVKE
ELMLLGFISLLLTVLQSSIVKICVPKDVVMHLLPCSLSDAPSHESQHHRRLLVEEEEAAA
AGYCTAKHKVPLLSLEALHHLHIFIFVLAIVHVTFSLLTVVFGGAKIRQWKHWEDSIAKA
NYETAHVLKPRVTHVQQHDFIRDRFVGMGKRSAIFGWMHSFFKQFYGSVSKSDYAALRLG
FIMTHCKQNPKFNFHKYMIRALEDDFKTVVGISWYLWVFVVIFLFLNVNGMPTLTWNRHF
DLAAALKCFNAILMQNKWKRVVLASNNWVPATLVLLKRVVLLANGN*

Transcript Sequence

Transcript ID

PGSC0003DMT400052280
Transcript Infomation

pacid=37458052 locus=PGSC0003DMG400020286 ID=PGSC0003DMT400052280.v4.03 annot-version=v4.03
Sequence

ATGAGTGGAGGCGGAGAAGGAGACACATTGGAATTTACCCCTACTTGGGTGGTCGCCGCC
GTCTGCACCGTCATCGTTGCCATTTCTCTAGCCGCTGAGCGACTCATCCATTATACTGGA
AAGTATCTGAAGAAGAAGAATCAGAAGCCTTTATATGAAGCGCTACAGAAAGTTAAAGAA
GAGTTGATGCTTTTGGGGTTTATATCCCTTTTACTGACGGTGCTTCAAAGTAGCATAGTC
AAGATTTGTGTGCCTAAAGATGTGGTCATGCACTTACTACCATGTTCATTATCGGATGCC
CCTTCTCATGAATCACAACATCATCGGCGGCTGTTAGTTGAAGAAGAAGAAGCTGCTGCT
GCTGGCTATTGCACTGCAAAACATAAGGTCCCATTACTCTCTCTTGAAGCGTTGCATCAC
CTTCACATTTTCATCTTTGTCCTTGCAATTGTTCATGTGACTTTCTCTCTTCTGACAGTT
GTATTTGGAGGAGCCAAGATACGTCAATGGAAGCACTGGGAGGACAGTATTGCAAAAGCT
AATTATGAGACTGCACATGTTTTAAAACCACGGGTTACACATGTCCAGCAACACGATTTC
ATCAGGGACCGATTTGTGGGTATGGGCAAACGCTCAGCCATTTTTGGTTGGATGCACTCT
TTCTTTAAGCAGTTTTATGGTTCTGTCAGCAAGTCAGATTATGCTGCTCTGCGTTTGGGG
TTCATTATGACACATTGCAAGCAAAACCCAAAATTTAATTTTCACAAGTACATGATTCGT
GCTCTGGAAGATGATTTTAAGACTGTCGTCGGTATCAGTTGGTATCTCTGGGTATTTGTT
GTCATCTTCTTGTTTCTGAATGTTAATGGTATGCCAACTCTAACTTGGAATAGACATTTT
GACCTTGCAGCTGCTTTGAAATGTTTCAATGCTATACTAATGCAGAACAAATGGAAAAGG
GTTGTATTGGCAAGTAATAATTGGGTACCAGCAACCTTAGTGCTGTTGAAGAGAGTTGTT
CTCTTGGCAAATGGAAACTAA