Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400052272
CDS Infomation

pacid=37456487 polypeptide=PGSC0003DMP400035238 locus=PGSC0003DMG400020283 ID=PGSC0003DMT400052272.v4.03 annot-version=v4.03
Sequence

ATGTTGAAACAGGTCGAGGAGTTGTATTCTTTGGATCTTGATGAGCTCAACAGTCTTAGG
CCTGTGTACGGTTTGATATTCCTTTTCAAATGGCGTCCTGGTGAAAAAGATGATCGCCTT
GTGATCAAGGACCCAAACCCAAACCTATTCTTTGCTAGTCAGGTGATAAACAATGCTTGT
GCTACCCAAGCAATCCTTTCAATCCTCCTGAACAGTCCAGATGTTGATATTGGCCCAGAA
TTATCTGCACTAAAAGAATTCACAAAGAATTTCCCACCGGAGCTTAAAGGTTTAGCTATC
AATAACAGTGAAGCAATTCGCACAGCTCATAATAGTTTTGCAAGACCTGAGCCATTTGTG
CCCGAGGAGCAGAAAGCTGCTGGAAAAGATGATGATGTATATCATTTTATCAGCTATATA
CCTGTGGACGGTGTGTTGTATGAGCTTGATGGATTGAAGGAGGGACCAATCAGTCTTGGA
CCATGCCCTGGTGGGCAAGGTGATATTGAGTGGTTGCGCATGGTGCAACCAGTTATTCAG
GAACGTATTGAGAGGTATTCCCAAAGTGAAATAAGATTCAATCTGATGGCTGTAGTAAAG
AACAGGAAAGAGGTGTATACTGCAGAGCTGAAGGAGCTTCAAAAGAGGAGGGAACGTATT
CTGCAGCAGCTGGCTGCATCCCAGTCGGAGAGAATGGTGGATAGCAGCCCAGTGGAATCA
CTAAATAAATCCTTAGCAGAGGTAAATTCTGGTATTGAAGCTGTTAGTGATAAGATATTG
AGGGAGGAGGAGAAGTTCAAGAAATGGAAAACTGAAAATATCCGTCGGAAGCACAACTAT
ATACCCTTTCTGTTCAACTTTTTGAAAATTCTAGCTGAAAAGAAGCAGCTGAGACCTCTT
ATAGAGAAGGCCAAACAGAAAACCACCAATCCTAGATGA

Peptide Sequence

PEP ID

PGSC0003DMP400035238
PEP Infomation

pacid=37456487 transcript=PGSC0003DMT400052272 locus=PGSC0003DMG400020283 ID=PGSC0003DMT400052272.v4.03 annot-version=v4.03
Sequence

MLKQVEELYSLDLDELNSLRPVYGLIFLFKWRPGEKDDRLVIKDPNPNLFFASQVINNAC
ATQAILSILLNSPDVDIGPELSALKEFTKNFPPELKGLAINNSEAIRTAHNSFARPEPFV
PEEQKAAGKDDDVYHFISYIPVDGVLYELDGLKEGPISLGPCPGGQGDIEWLRMVQPVIQ
ERIERYSQSEIRFNLMAVVKNRKEVYTAELKELQKRRERILQQLAASQSERMVDSSPVES
LNKSLAEVNSGIEAVSDKILREEEKFKKWKTENIRRKHNYIPFLFNFLKILAEKKQLRPL
IEKAKQKTTNPR*

Transcript Sequence

Transcript ID

PGSC0003DMT400052272
Transcript Infomation

pacid=37456487 locus=PGSC0003DMG400020283 ID=PGSC0003DMT400052272.v4.03 annot-version=v4.03
Sequence

ATGTTGAAACAGGTCGAGGAGTTGTATTCTTTGGATCTTGATGAGCTCAACAGTCTTAGG
CCTGTGTACGGTTTGATATTCCTTTTCAAATGGCGTCCTGGTGAAAAAGATGATCGCCTT
GTGATCAAGGACCCAAACCCAAACCTATTCTTTGCTAGTCAGGTGATAAACAATGCTTGT
GCTACCCAAGCAATCCTTTCAATCCTCCTGAACAGTCCAGATGTTGATATTGGCCCAGAA
TTATCTGCACTAAAAGAATTCACAAAGAATTTCCCACCGGAGCTTAAAGGTTTAGCTATC
AATAACAGTGAAGCAATTCGCACAGCTCATAATAGTTTTGCAAGACCTGAGCCATTTGTG
CCCGAGGAGCAGAAAGCTGCTGGAAAAGATGATGATGTATATCATTTTATCAGCTATATA
CCTGTGGACGGTGTGTTGTATGAGCTTGATGGATTGAAGGAGGGACCAATCAGTCTTGGA
CCATGCCCTGGTGGGCAAGGTGATATTGAGTGGTTGCGCATGGTGCAACCAGTTATTCAG
GAACGTATTGAGAGGTATTCCCAAAGTGAAATAAGATTCAATCTGATGGCTGTAGTAAAG
AACAGGAAAGAGGTGTATACTGCAGAGCTGAAGGAGCTTCAAAAGAGGAGGGAACGTATT
CTGCAGCAGCTGGCTGCATCCCAGTCGGAGAGAATGGTGGATAGCAGCCCAGTGGAATCA
CTAAATAAATCCTTAGCAGAGGTAAATTCTGGTATTGAAGCTGTTAGTGATAAGATATTG
AGGGAGGAGGAGAAGTTCAAGAAATGGAAAACTGAAAATATCCGTCGGAAGCACAACTAT
ATACCCTTTCTGTTCAACTTTTTGAAAATTCTAGCTGAAAAGAAGCAGCTGAGACCTCTT
ATAGAGAAGGCCAAACAGAAAACCACCAATCCTAGATGA