Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400052247
CDS Infomation

pacid=37428185 polypeptide=PGSC0003DMP400035222 locus=PGSC0003DMG400020267 ID=PGSC0003DMT400052247.v4.03 annot-version=v4.03
Sequence

ATGCCTCCAACGTATTTTCCTCTTCGGTGGGAGAGCACAGGGGATCAATGGTGGTATGCT
TCGCCAATTGATTATGCAGCTGCTAATGGTCATTATGATTTGGTTCGTGAGCTTCTTCGA
TTAGATGGAAATCACCTTATTAAGCTCACTTCACTTCGTAGGATTCGAAGGCTTGAGTCT
GTTTGGGATGATGAAGAACAGCTTGATGATGTGGCTAGATGCCGCTCTCAGGTTGCTAGA
AAACTGATGCTTGAATGTGACACCAAGAAAGGGAAAAATTCACTTCTTAAAGCTGGATAT
GGTGGTTGGCTTTTATATACTGCTGCCTCTGCTGGAGACCTGTCTTTTGTTCAAGAATTG
CTTGAAAGAAACCCGCTTTTGGTGTTTGGAGAAGGGGAATATGGTGTCACTGATATATTA
TATGCTGCTGCTAGGAGTAAAAGTTGTGATCTTTTTAAGGTTCTGTTTGATTTTGCTATC
ACCCCGAGGTTTCTGGTGCGTGATGGTGGTGGTGAGATGGATAAACATATTGGTGAGGTT
CCATCGGCTTATAAGTGGGAGATGATGAATAGAGCAATTCATGCTACTGCTAGAGGAGGT
AATCTTCAGGTACTGAAGGAGCTTCTTGCTGAATGCTGTGATGATATCTTAGCTTATAGA
GACATTCAGGGTGCAACACCCTTGCATGCAGCTGCTGGCAAGGGACAGGTTGAGGTTGTC
CAACATCTTATAAAAAGTTTTGATATTATTAACTCCACAGACAATCAAGGCAACACTGCA
CTACATATTGCTGCTTCCAGGGGCCAATTAGCTGTTGTTGAAGCTTTAATTGTTGCATCA
AGCTCATTGGTCTATTTGAGAAACAATGCCGGAGAAACATTTCTCCATGTCGCCATTACT
GGTTTCCAAACTCCTTGTTTCCGTAGATTGGACCATCAAATCCAGCTCATGAAGCAATTA
GTTTGTGGGAAGTTTTTCAACATTGAAGAAATTGTCAACGCTGAAAATAAGGATGGTAGA
ACCGCACTTCATTTGGCAGTCATTGGAAATATTCATTCTGAACTTGTGGAATTACTAATG
ACTGTCCGCTCTGTGAATGTCAATACTCGTGATAAGGATGGAATGACACCACTTGATATC
CTTAGGCAACGGCCACGTTCTGCTTCATCAGAACTCCTCACAAAACAGTTGATCTCTGCT
GGGGGGATTTTTAGTCAACACGATTATTCAGCAAGGAGAGTTGTAGCATCGCATTTAAAA
ATGCAACACGTAGGTAGTAGTCCTGGCACTTCCTTCAGAATCTCTGACACCGAAATCTTC
TTATACACGGGCATTGAGCGTGATGGCAATGAAAGCGCAGATCTGAGCACCTCAACTGAT
GTGAGTCAACATAATGTGAACACTGAAAATGATTGTTCTAGAAATGAGGGTAAAACCAAT
TCTGCAAATAATGCTGCACAAAGGCTGAAACGCTTTTTCTATTGGCCAAAAATAAGGAAA
GGAGATACTCAGAGGCTCAAGAAATTGGCGGATCAAAGTTCTGCTAGAAATTCAGAAGCA
GCACCAGTTCCTCTTCGACAGAGATTCTCCAAGCCTTCCTCTCTTCCAAACAACAAGCGG
ACACTCTCTGTTAGAAGTAACCTTCCAAGTCCAACAGCTAAGAAGAAACTTGCTTCAGGG
CTAGTAAATGGTGTCATGCTGGCCATACCACATCTTAGTGTCCGCCGTAGATCATCTTGC
TCTAGTTCATTCTCAATTTCATCAGTGTCTTCACACACTTCATTGGACCAACAAAAGGCC
ACTCAAATTGAGAATGAGCTTGCTAGACCTTCTAGTTCTAATCACGTAAGGGCAAAATCA
TCAGATTCGATATACAAACAAAACAAGAGTTTGGTGAACCAGTACTTGTGTTTTGGTGCT
TCAGAACAAACTGTCAAAGCCACTTCAAGTGAACTGAGGCCATATGAAATTTACGAGCGC
TCTGTTCTATCCACGGCCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400035222
PEP Infomation

pacid=37428185 transcript=PGSC0003DMT400052247 locus=PGSC0003DMG400020267 ID=PGSC0003DMT400052247.v4.03 annot-version=v4.03
Sequence

MPPTYFPLRWESTGDQWWYASPIDYAAANGHYDLVRELLRLDGNHLIKLTSLRRIRRLES
VWDDEEQLDDVARCRSQVARKLMLECDTKKGKNSLLKAGYGGWLLYTAASAGDLSFVQEL
LERNPLLVFGEGEYGVTDILYAAARSKSCDLFKVLFDFAITPRFLVRDGGGEMDKHIGEV
PSAYKWEMMNRAIHATARGGNLQVLKELLAECCDDILAYRDIQGATPLHAAAGKGQVEVV
QHLIKSFDIINSTDNQGNTALHIAASRGQLAVVEALIVASSSLVYLRNNAGETFLHVAIT
GFQTPCFRRLDHQIQLMKQLVCGKFFNIEEIVNAENKDGRTALHLAVIGNIHSELVELLM
TVRSVNVNTRDKDGMTPLDILRQRPRSASSELLTKQLISAGGIFSQHDYSARRVVASHLK
MQHVGSSPGTSFRISDTEIFLYTGIERDGNESADLSTSTDVSQHNVNTENDCSRNEGKTN
SANNAAQRLKRFFYWPKIRKGDTQRLKKLADQSSARNSEAAPVPLRQRFSKPSSLPNNKR
TLSVRSNLPSPTAKKKLASGLVNGVMLAIPHLSVRRRSSCSSSFSISSVSSHTSLDQQKA
TQIENELARPSSSNHVRAKSSDSIYKQNKSLVNQYLCFGASEQTVKATSSELRPYEIYER
SVLSTA*

Transcript Sequence

Transcript ID

PGSC0003DMT400052247
Transcript Infomation

pacid=37428185 locus=PGSC0003DMG400020267 ID=PGSC0003DMT400052247.v4.03 annot-version=v4.03
Sequence

ATGCCTCCAACGTATTTTCCTCTTCGGTGGGAGAGCACAGGGGATCAATGGTGGTATGCT
TCGCCAATTGATTATGCAGCTGCTAATGGTCATTATGATTTGGTTCGTGAGCTTCTTCGA
TTAGATGGAAATCACCTTATTAAGCTCACTTCACTTCGTAGGATTCGAAGGCTTGAGTCT
GTTTGGGATGATGAAGAACAGCTTGATGATGTGGCTAGATGCCGCTCTCAGGTTGCTAGA
AAACTGATGCTTGAATGTGACACCAAGAAAGGGAAAAATTCACTTCTTAAAGCTGGATAT
GGTGGTTGGCTTTTATATACTGCTGCCTCTGCTGGAGACCTGTCTTTTGTTCAAGAATTG
CTTGAAAGAAACCCGCTTTTGGTGTTTGGAGAAGGGGAATATGGTGTCACTGATATATTA
TATGCTGCTGCTAGGAGTAAAAGTTGTGATCTTTTTAAGGTTCTGTTTGATTTTGCTATC
ACCCCGAGGTTTCTGGTGCGTGATGGTGGTGGTGAGATGGATAAACATATTGGTGAGGTT
CCATCGGCTTATAAGTGGGAGATGATGAATAGAGCAATTCATGCTACTGCTAGAGGAGGT
AATCTTCAGGTACTGAAGGAGCTTCTTGCTGAATGCTGTGATGATATCTTAGCTTATAGA
GACATTCAGGGTGCAACACCCTTGCATGCAGCTGCTGGCAAGGGACAGGTTGAGGTTGTC
CAACATCTTATAAAAAGTTTTGATATTATTAACTCCACAGACAATCAAGGCAACACTGCA
CTACATATTGCTGCTTCCAGGGGCCAATTAGCTGTTGTTGAAGCTTTAATTGTTGCATCA
AGCTCATTGGTCTATTTGAGAAACAATGCCGGAGAAACATTTCTCCATGTCGCCATTACT
GGTTTCCAAACTCCTTGTTTCCGTAGATTGGACCATCAAATCCAGCTCATGAAGCAATTA
GTTTGTGGGAAGTTTTTCAACATTGAAGAAATTGTCAACGCTGAAAATAAGGATGGTAGA
ACCGCACTTCATTTGGCAGTCATTGGAAATATTCATTCTGAACTTGTGGAATTACTAATG
ACTGTCCGCTCTGTGAATGTCAATACTCGTGATAAGGATGGAATGACACCACTTGATATC
CTTAGGCAACGGCCACGTTCTGCTTCATCAGAACTCCTCACAAAACAGTTGATCTCTGCT
GGGGGGATTTTTAGTCAACACGATTATTCAGCAAGGAGAGTTGTAGCATCGCATTTAAAA
ATGCAACACGTAGGTAGTAGTCCTGGCACTTCCTTCAGAATCTCTGACACCGAAATCTTC
TTATACACGGGCATTGAGCGTGATGGCAATGAAAGCGCAGATCTGAGCACCTCAACTGAT
GTGAGTCAACATAATGTGAACACTGAAAATGATTGTTCTAGAAATGAGGGTAAAACCAAT
TCTGCAAATAATGCTGCACAAAGGCTGAAACGCTTTTTCTATTGGCCAAAAATAAGGAAA
GGAGATACTCAGAGGCTCAAGAAATTGGCGGATCAAAGTTCTGCTAGAAATTCAGAAGCA
GCACCAGTTCCTCTTCGACAGAGATTCTCCAAGCCTTCCTCTCTTCCAAACAACAAGCGG
ACACTCTCTGTTAGAAGTAACCTTCCAAGTCCAACAGCTAAGAAGAAACTTGCTTCAGGG
CTAGTAAATGGTGTCATGCTGGCCATACCACATCTTAGTGTCCGCCGTAGATCATCTTGC
TCTAGTTCATTCTCAATTTCATCAGTGTCTTCACACACTTCATTGGACCAACAAAAGGCC
ACTCAAATTGAGAATGAGCTTGCTAGACCTTCTAGTTCTAATCACGTAAGGGCAAAATCA
TCAGATTCGATATACAAACAAAACAAGAGTTTGGTGAACCAGTACTTGTGTTTTGGTGCT
TCAGAACAAACTGTCAAAGCCACTTCAAGTGAACTGAGGCCATATGAAATTTACGAGCGC
TCTGTTCTATCCACGGCCTGA