Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400052240
CDS Infomation

pacid=37424758 polypeptide=PGSC0003DMP400035218 locus=PGSC0003DMG400020264 ID=PGSC0003DMT400052240.v4.03 annot-version=v4.03
Sequence

ATGATAAGATCGACAGCAAAGCACAGTTTCGCAAAACCTATCATTCTTCTTCTTGCATTT
GTTGCTCTTCTAGCAATTTCCTTGACCCGCGATTTTCATTCCGCTTCTTCTTCTGCTTAT
GTTTCCCTTGCTACCACTTGGGCTCCTGACAAGTACCGTATTAACGTCTCCAATCATTCT
CTAAAGGATGCAGGAGGAAGTAATAGGGATCGTTACCCTGAAAGAGCGTTAGCCATGACC
TATGCTGATTTGCCTGCTCCTGAATTGAAATGGGAACAGATGGCATCTGCACCTGTGGTT
CGTTTGGATGGCTATTCTCTTCAGATTAAGGATTTGCTTTTCGTTTTTGCAGGATATGAA
AACCTAGACCATGTGCATTCTCATGTTGATGTTTTCAATTTTACAACAAATACATGGACT
GAGAGTTTTGCAATCCCAAAAGATATGGCACATTCACATTTAGGGGTGGCTACTGATGGA
AGATACATATATATAGTGTCAGGACAATATGGTCCCCAATGCAGGGGACCTACAGCAAAC
ACATTTGTTTTGGACACACACACCAGAAAATGGGAAAGCTTGCCACCATTACCAGCACCA
AGGTATGCACCAGCAACTCAGCTTTGGAAAGGCCGGCTACATGTGATGGGTGGAGGCAAA
GAGAATCGCCATACCCCTGGATTAGATCATTGGAGTCTTGCAGTAGCAAATGGAAAAGCC
TTAGAGAAGCACTGGCGCAAAGAAGTACCCATTCCTCGCGGAGGACCACATAGGGCATGT
ATCGCTGTTGGTGATCAACTCTACGTTATTGGTGGTCAAGAGGGTGATTTCATGGCCAAA
CCTGGCTCCCCTATCTTTAAATGCTCACGAAGGTTCGAGGTGGTTTTTGGAGATGTTTAT
ATGCTGGATGAAAGTATGAAATGGAAAGGGTTGCCTTCTATGCCAAAACCGGTTTCGCAC
ATAGAATGTTCTTGGGTTATTGTAAATAATTCTATTGTTATTGTTGGAGGCACAACAGAG
AAGCATCCTGTGACCAAAAGGATGATTTTAGTTGGAGAGGTGTTCCAGTTCAACCTAAAT
ACACTGACATGGTCTGTCATCGGAAAGATGCCATATCGGGCGAAGACAACACAGGCGGGG
TTCTGGGATGGATGGTTGTATTTCACCTCTGGACAGCGGGATAGAGGACCAGATAATCCA
CAGCCCAGGAAAGTAGTAGGAGATACATGGAGAACCAAATTGAGATTACAATGA

Peptide Sequence

PEP ID

PGSC0003DMP400035218
PEP Infomation

pacid=37424758 transcript=PGSC0003DMT400052240 locus=PGSC0003DMG400020264 ID=PGSC0003DMT400052240.v4.03 annot-version=v4.03
Sequence

MIRSTAKHSFAKPIILLLAFVALLAISLTRDFHSASSSAYVSLATTWAPDKYRINVSNHS
LKDAGGSNRDRYPERALAMTYADLPAPELKWEQMASAPVVRLDGYSLQIKDLLFVFAGYE
NLDHVHSHVDVFNFTTNTWTESFAIPKDMAHSHLGVATDGRYIYIVSGQYGPQCRGPTAN
TFVLDTHTRKWESLPPLPAPRYAPATQLWKGRLHVMGGGKENRHTPGLDHWSLAVANGKA
LEKHWRKEVPIPRGGPHRACIAVGDQLYVIGGQEGDFMAKPGSPIFKCSRRFEVVFGDVY
MLDESMKWKGLPSMPKPVSHIECSWVIVNNSIVIVGGTTEKHPVTKRMILVGEVFQFNLN
TLTWSVIGKMPYRAKTTQAGFWDGWLYFTSGQRDRGPDNPQPRKVVGDTWRTKLRLQ*

Transcript Sequence

Transcript ID

PGSC0003DMT400052240
Transcript Infomation

pacid=37424758 locus=PGSC0003DMG400020264 ID=PGSC0003DMT400052240.v4.03 annot-version=v4.03
Sequence

ATGATAAGATCGACAGCAAAGCACAGTTTCGCAAAACCTATCATTCTTCTTCTTGCATTT
GTTGCTCTTCTAGCAATTTCCTTGACCCGCGATTTTCATTCCGCTTCTTCTTCTGCTTAT
GTTTCCCTTGCTACCACTTGGGCTCCTGACAAGTACCGTATTAACGTCTCCAATCATTCT
CTAAAGGATGCAGGAGGAAGTAATAGGGATCGTTACCCTGAAAGAGCGTTAGCCATGACC
TATGCTGATTTGCCTGCTCCTGAATTGAAATGGGAACAGATGGCATCTGCACCTGTGGTT
CGTTTGGATGGCTATTCTCTTCAGATTAAGGATTTGCTTTTCGTTTTTGCAGGATATGAA
AACCTAGACCATGTGCATTCTCATGTTGATGTTTTCAATTTTACAACAAATACATGGACT
GAGAGTTTTGCAATCCCAAAAGATATGGCACATTCACATTTAGGGGTGGCTACTGATGGA
AGATACATATATATAGTGTCAGGACAATATGGTCCCCAATGCAGGGGACCTACAGCAAAC
ACATTTGTTTTGGACACACACACCAGAAAATGGGAAAGCTTGCCACCATTACCAGCACCA
AGGTATGCACCAGCAACTCAGCTTTGGAAAGGCCGGCTACATGTGATGGGTGGAGGCAAA
GAGAATCGCCATACCCCTGGATTAGATCATTGGAGTCTTGCAGTAGCAAATGGAAAAGCC
TTAGAGAAGCACTGGCGCAAAGAAGTACCCATTCCTCGCGGAGGACCACATAGGGCATGT
ATCGCTGTTGGTGATCAACTCTACGTTATTGGTGGTCAAGAGGGTGATTTCATGGCCAAA
CCTGGCTCCCCTATCTTTAAATGCTCACGAAGGTTCGAGGTGGTTTTTGGAGATGTTTAT
ATGCTGGATGAAAGTATGAAATGGAAAGGGTTGCCTTCTATGCCAAAACCGGTTTCGCAC
ATAGAATGTTCTTGGGTTATTGTAAATAATTCTATTGTTATTGTTGGAGGCACAACAGAG
AAGCATCCTGTGACCAAAAGGATGATTTTAGTTGGAGAGGTGTTCCAGTTCAACCTAAAT
ACACTGACATGGTCTGTCATCGGAAAGATGCCATATCGGGCGAAGACAACACAGGCGGGG
TTCTGGGATGGATGGTTGTATTTCACCTCTGGACAGCGGGATAGAGGACCAGATAATCCA
CAGCCCAGGAAAGTAGTAGGAGATACATGGAGAACCAAATTGAGATTACAATGA