Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400052235
CDS Infomation

pacid=37426770 polypeptide=PGSC0003DMP400035214 locus=PGSC0003DMG400020262 ID=PGSC0003DMT400052235.v4.03 annot-version=v4.03
Sequence

ATGGTTTCGGGACTGAGGGCGAAAACTAGGAAAGGTCCCTCAGTTCAAGTAGATTATCTA
ATTCATATTCAGGAGATCAAACCTTGGCCTCCCTCGCAGTCATTGAAGTCTGTACGTGCT
ATTGTGATCCAATGGGAAAATGGAGATAGGAATGGTTCTACTAGTCAAGTTGTCCCATTT
TTAGGCTCTGGTGTTGGTGATGGAAGAATTGAGTTCAATGAGTCCTTTAAACTACCTGTG
ACACTACTGAAGGAAATTTCTAATAAAGGGGGTGATGGAAACAGTTTTCAAAAAAATTGC
ATTGAGTTCAACTTGTATGAACCCCGACGTGATAAGACAGTGAAAGGTCAACCATTAGGA
ACTGCTATTATCAATTTGGCTGAATATGGTGTTGTTAAGGAGGGTTTGAATGTAAGTGCC
CCTATTAATTGCACAAGGGCTTATAGGAACACTACACAGGCCCTTCTCTTACTGAAAATC
CAGCCATTTGAGAAGGGTCGTGTGAGCTCCTCATCTTCAAGTGACATTTTAACGAGAGAA
GTGTCAATAGACCGTAATGGTGTTGAATCTGTGTCTACATTGACAAGTGAAGAATGTGCT
GAGGAAGCTGAGATTGCCTCATTTACCGATGATGATGGTTCCTCGCACTCATCAGTTGCT
GTTTCTTCTTCAGCTAATGGATCAAACTGTGGTTCACTACCACAAGGAGAGGATGAAGCT
GAGGGAGTGAAAAGTAATCCTGGACAACATGAAGATGAACATCTTCTACATTCAAAGAAA
AAGTCTGTAGATTTGGATGAGAAGCAAGTGGTGAAATCATTATCTGATTTGAAGGAAAGC
CCATCTCCTTCTTCAACTGATTTGTCTTCTGATCTTGCATGGCTCTCAAGGAAAATAGGC
GGTAGTGGTAGCAATAAATTTTCAACATCAAGTGAGAATGAGATAACTGAAAACTCTCAG
AATCCGCGGGTGATGACCAAACATGTTGAACCAGTACAACGAATGGAAAGAATACTGGCT
AACAGTGAAAGTGGTGGTGAAATATATACTCCTCAAAATTCTGAGGAAGGGAGGCTCAAT
AGTCATCTAGATCAAGAAGGCTTTCCAATTTCACATATCACAGATGAGAGTAAAAGCTTT
ATGAACTCAGCAAGTCATTTCTCCAGTTCTGAGAATGCTGATAATGCTTCTACTCCTGTT
GTGGATAGGCATGAGGATGTGAGAGATATTGTTACCGAAAATGGTTCTTATGAGGATATA
GAGAATTATCAGGAAAATGGAAAAGTACAAGAAATTGTCGAAGAGGAAGAAAGTGAGGAT
GCTATGAAGAATGACTCAGAAGAAAGTGACGTAAATTCTACTGACTCTGAGAATGCTTCT
ACTCCTCTTGGAAATAGACATGAGGATGTAAGAGCTGTTGTTACCAAGAATGGTTCTTAT
GAGGGTGAAAACAGTGAGAATTATCAAGAGAGGAGGCAAGAATCTGCTGCCCATAATAGA
GAGAACTATCAGGAAAATGAACAAGTACAAGAAATAGTCGAAGAGGAAGAAAGTGAGGAT
TCTATGAAGAATGTCTCAGAAGAAAGTGACGTAAATTCTACTGACACGGACAGTTATGGA
TCAAAGAGTAGTATCCTGAATAATGAGAGATTAAAGCATGTAAAGTCAGTTAGGTCATCA
GCAGAACCTAATAGAGTAAGAGGGTCTGTCAGGGGCAATCAACTTTTAGCACAAAATAAA
CAGATTAGTACTCAAGGTTTAGCAAACGAGTGGAAAGATCGAAAGGCGCATTCAACAATT
CTTTTGGAAAGCAAACTCCATAAGTTGGAGCAAAGAGTAAAGATGGCAGAAGGAGAATTG
AGAGAAGCTGCTGCAATTGAAGTTGGCCTCTATTCGGTTGTTGCAGAGCATGGGAGTTCC
ACAAATAAGGTTCATGCTCCTGCTAGACGCCTGTCGAGGTTCTATTTCCATGCTTGTAAA
GATGACTCTCTATTGAAAAGGGGATCTGCTGCTAAAAGTGCCGTCTCTGGATTAATTTTG
GTTGCAAGAGCATGTGGAAATGATGTTCCTAGGTTAACTTTCTGGTTATCAAATTCGGTG
GTGCTGAGAGCAACTATAAGCAAATTCCAGAGGCAGCTGTGTTTGCCTCGTGCTACTGAA
ACTATGCTTGGAGAGGCTGTTTCCAAGGACAAGAAAAATATATCTTCCCCACTTAAGTGG
GAGACTTTTTCCAGCAATGTTATAAGGGATGATTTTTGTGAAAGTTTTGGTAATTGGGAG
GACCCTCGTACATTTACGAGAGCACTTCAGAGAACAGAGGCCTGGATATTCTCCCTTATC
GTTGAATCTATTTGGTGGCAGACTCTCACTCCACATATGCAATCTGGTGCTGCAAAAGAA
ATCCGCTTAAGTATGAATTCTTTGATAAGCAAAGTTTATAGAAGGACAGCAAGTTCAGAT
AATGAAGAGCATGGAAGTTATTCTTCAGAGCTTTGGAAGAAAGCCTTCAAGGATGCATGT
GAAAGGATTTGCCCTGTTCGAGCTGGAGGGCACGAGTGTGGTTGTTTGCGTTTTCTATCT
AAACTGATAATGGAACAATGTGTGGCTAGACTGGATGTAGCTATGTTCAATGCAATCCTT
CGAGAGTCTGCTGATGAGATTCCTTCAGATCCTATATCAGACCCTATTAGTGATGCCGAT
GTTCTTCCTATTCCAGCTGGGCAGGCTAGCTTTGGGGCGGGGGCACAACTGAAAAATACG
GTTGGGAATTGGTCCAGATGGCTTACTGACCTTTTCGACATTGATGATGGGGAATCACTA
AAAAATAGTAATGAAGAGAATGGGAGTAAAGAACTTGACACCTCTGCAAAGTCTTTCTAC
CTTCTAAATGCATTGAGTGATCTTATGATGCTTCCGAAGGATATGCTTTTAAGCAGGACA
ATGAGAAAAGAGGTATGTCCGGCACTTGGTCCATCACTAATAAGAAGGGTTCTTAATATA
TTTGTTCCAGATGAGTTTTGTCGTGATTCAATACCTGAAGCGGTATTTGAGGTTCTTCTT
TCAGAGGAACCTTCTGAGGCTGAGGATGATTCTGTTACAAACTACCCATGCACAGCAGCT
CCTGTGGCTTATATGCCACCTCCAATAGCTTCAGTAGCCGGTATGTTGGGTGATGGTTAT
AGCTATTCTATGTTGACAAGAAGTGCATCTTCAGTGCTCAAAAAGTCATACACAAGTGAT
GAGGAGCTTGAGCTATTGGATTCACCCTTGAATTTTATCATTAGCGATGGCACTGAAGCT
TCACATTCTTTAGCAAAACAGAGTTCCATGCCAAAAAGTAGTGGAAGGCAGAGGTACCAA
CTCCTTCGGGAGGTTTGGGATAACAGTGAGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400035214
PEP Infomation

pacid=37426770 transcript=PGSC0003DMT400052235 locus=PGSC0003DMG400020262 ID=PGSC0003DMT400052235.v4.03 annot-version=v4.03
Sequence

MVSGLRAKTRKGPSVQVDYLIHIQEIKPWPPSQSLKSVRAIVIQWENGDRNGSTSQVVPF
LGSGVGDGRIEFNESFKLPVTLLKEISNKGGDGNSFQKNCIEFNLYEPRRDKTVKGQPLG
TAIINLAEYGVVKEGLNVSAPINCTRAYRNTTQALLLLKIQPFEKGRVSSSSSSDILTRE
VSIDRNGVESVSTLTSEECAEEAEIASFTDDDGSSHSSVAVSSSANGSNCGSLPQGEDEA
EGVKSNPGQHEDEHLLHSKKKSVDLDEKQVVKSLSDLKESPSPSSTDLSSDLAWLSRKIG
GSGSNKFSTSSENEITENSQNPRVMTKHVEPVQRMERILANSESGGEIYTPQNSEEGRLN
SHLDQEGFPISHITDESKSFMNSASHFSSSENADNASTPVVDRHEDVRDIVTENGSYEDI
ENYQENGKVQEIVEEEESEDAMKNDSEESDVNSTDSENASTPLGNRHEDVRAVVTKNGSY
EGENSENYQERRQESAAHNRENYQENEQVQEIVEEEESEDSMKNVSEESDVNSTDTDSYG
SKSSILNNERLKHVKSVRSSAEPNRVRGSVRGNQLLAQNKQISTQGLANEWKDRKAHSTI
LLESKLHKLEQRVKMAEGELREAAAIEVGLYSVVAEHGSSTNKVHAPARRLSRFYFHACK
DDSLLKRGSAAKSAVSGLILVARACGNDVPRLTFWLSNSVVLRATISKFQRQLCLPRATE
TMLGEAVSKDKKNISSPLKWETFSSNVIRDDFCESFGNWEDPRTFTRALQRTEAWIFSLI
VESIWWQTLTPHMQSGAAKEIRLSMNSLISKVYRRTASSDNEEHGSYSSELWKKAFKDAC
ERICPVRAGGHECGCLRFLSKLIMEQCVARLDVAMFNAILRESADEIPSDPISDPISDAD
VLPIPAGQASFGAGAQLKNTVGNWSRWLTDLFDIDDGESLKNSNEENGSKELDTSAKSFY
LLNALSDLMMLPKDMLLSRTMRKEVCPALGPSLIRRVLNIFVPDEFCRDSIPEAVFEVLL
SEEPSEAEDDSVTNYPCTAAPVAYMPPPIASVAGMLGDGYSYSMLTRSASSVLKKSYTSD
EELELLDSPLNFIISDGTEASHSLAKQSSMPKSSGRQRYQLLREVWDNSE*

Transcript Sequence

Transcript ID

PGSC0003DMT400052235
Transcript Infomation

pacid=37426770 locus=PGSC0003DMG400020262 ID=PGSC0003DMT400052235.v4.03 annot-version=v4.03
Sequence

ATGGTTTCGGGACTGAGGGCGAAAACTAGGAAAGGTCCCTCAGTTCAAGTAGATTATCTA
ATTCATATTCAGGAGATCAAACCTTGGCCTCCCTCGCAGTCATTGAAGTCTGTACGTGCT
ATTGTGATCCAATGGGAAAATGGAGATAGGAATGGTTCTACTAGTCAAGTTGTCCCATTT
TTAGGCTCTGGTGTTGGTGATGGAAGAATTGAGTTCAATGAGTCCTTTAAACTACCTGTG
ACACTACTGAAGGAAATTTCTAATAAAGGGGGTGATGGAAACAGTTTTCAAAAAAATTGC
ATTGAGTTCAACTTGTATGAACCCCGACGTGATAAGACAGTGAAAGGTCAACCATTAGGA
ACTGCTATTATCAATTTGGCTGAATATGGTGTTGTTAAGGAGGGTTTGAATGTAAGTGCC
CCTATTAATTGCACAAGGGCTTATAGGAACACTACACAGGCCCTTCTCTTACTGAAAATC
CAGCCATTTGAGAAGGGTCGTGTGAGCTCCTCATCTTCAAGTGACATTTTAACGAGAGAA
GTGTCAATAGACCGTAATGGTGTTGAATCTGTGTCTACATTGACAAGTGAAGAATGTGCT
GAGGAAGCTGAGATTGCCTCATTTACCGATGATGATGGTTCCTCGCACTCATCAGTTGCT
GTTTCTTCTTCAGCTAATGGATCAAACTGTGGTTCACTACCACAAGGAGAGGATGAAGCT
GAGGGAGTGAAAAGTAATCCTGGACAACATGAAGATGAACATCTTCTACATTCAAAGAAA
AAGTCTGTAGATTTGGATGAGAAGCAAGTGGTGAAATCATTATCTGATTTGAAGGAAAGC
CCATCTCCTTCTTCAACTGATTTGTCTTCTGATCTTGCATGGCTCTCAAGGAAAATAGGC
GGTAGTGGTAGCAATAAATTTTCAACATCAAGTGAGAATGAGATAACTGAAAACTCTCAG
AATCCGCGGGTGATGACCAAACATGTTGAACCAGTACAACGAATGGAAAGAATACTGGCT
AACAGTGAAAGTGGTGGTGAAATATATACTCCTCAAAATTCTGAGGAAGGGAGGCTCAAT
AGTCATCTAGATCAAGAAGGCTTTCCAATTTCACATATCACAGATGAGAGTAAAAGCTTT
ATGAACTCAGCAAGTCATTTCTCCAGTTCTGAGAATGCTGATAATGCTTCTACTCCTGTT
GTGGATAGGCATGAGGATGTGAGAGATATTGTTACCGAAAATGGTTCTTATGAGGATATA
GAGAATTATCAGGAAAATGGAAAAGTACAAGAAATTGTCGAAGAGGAAGAAAGTGAGGAT
GCTATGAAGAATGACTCAGAAGAAAGTGACGTAAATTCTACTGACTCTGAGAATGCTTCT
ACTCCTCTTGGAAATAGACATGAGGATGTAAGAGCTGTTGTTACCAAGAATGGTTCTTAT
GAGGGTGAAAACAGTGAGAATTATCAAGAGAGGAGGCAAGAATCTGCTGCCCATAATAGA
GAGAACTATCAGGAAAATGAACAAGTACAAGAAATAGTCGAAGAGGAAGAAAGTGAGGAT
TCTATGAAGAATGTCTCAGAAGAAAGTGACGTAAATTCTACTGACACGGACAGTTATGGA
TCAAAGAGTAGTATCCTGAATAATGAGAGATTAAAGCATGTAAAGTCAGTTAGGTCATCA
GCAGAACCTAATAGAGTAAGAGGGTCTGTCAGGGGCAATCAACTTTTAGCACAAAATAAA
CAGATTAGTACTCAAGGTTTAGCAAACGAGTGGAAAGATCGAAAGGCGCATTCAACAATT
CTTTTGGAAAGCAAACTCCATAAGTTGGAGCAAAGAGTAAAGATGGCAGAAGGAGAATTG
AGAGAAGCTGCTGCAATTGAAGTTGGCCTCTATTCGGTTGTTGCAGAGCATGGGAGTTCC
ACAAATAAGGTTCATGCTCCTGCTAGACGCCTGTCGAGGTTCTATTTCCATGCTTGTAAA
GATGACTCTCTATTGAAAAGGGGATCTGCTGCTAAAAGTGCCGTCTCTGGATTAATTTTG
GTTGCAAGAGCATGTGGAAATGATGTTCCTAGGTTAACTTTCTGGTTATCAAATTCGGTG
GTGCTGAGAGCAACTATAAGCAAATTCCAGAGGCAGCTGTGTTTGCCTCGTGCTACTGAA
ACTATGCTTGGAGAGGCTGTTTCCAAGGACAAGAAAAATATATCTTCCCCACTTAAGTGG
GAGACTTTTTCCAGCAATGTTATAAGGGATGATTTTTGTGAAAGTTTTGGTAATTGGGAG
GACCCTCGTACATTTACGAGAGCACTTCAGAGAACAGAGGCCTGGATATTCTCCCTTATC
GTTGAATCTATTTGGTGGCAGACTCTCACTCCACATATGCAATCTGGTGCTGCAAAAGAA
ATCCGCTTAAGTATGAATTCTTTGATAAGCAAAGTTTATAGAAGGACAGCAAGTTCAGAT
AATGAAGAGCATGGAAGTTATTCTTCAGAGCTTTGGAAGAAAGCCTTCAAGGATGCATGT
GAAAGGATTTGCCCTGTTCGAGCTGGAGGGCACGAGTGTGGTTGTTTGCGTTTTCTATCT
AAACTGATAATGGAACAATGTGTGGCTAGACTGGATGTAGCTATGTTCAATGCAATCCTT
CGAGAGTCTGCTGATGAGATTCCTTCAGATCCTATATCAGACCCTATTAGTGATGCCGAT
GTTCTTCCTATTCCAGCTGGGCAGGCTAGCTTTGGGGCGGGGGCACAACTGAAAAATACG
GTTGGGAATTGGTCCAGATGGCTTACTGACCTTTTCGACATTGATGATGGGGAATCACTA
AAAAATAGTAATGAAGAGAATGGGAGTAAAGAACTTGACACCTCTGCAAAGTCTTTCTAC
CTTCTAAATGCATTGAGTGATCTTATGATGCTTCCGAAGGATATGCTTTTAAGCAGGACA
ATGAGAAAAGAGGTATGTCCGGCACTTGGTCCATCACTAATAAGAAGGGTTCTTAATATA
TTTGTTCCAGATGAGTTTTGTCGTGATTCAATACCTGAAGCGGTATTTGAGGTTCTTCTT
TCAGAGGAACCTTCTGAGGCTGAGGATGATTCTGTTACAAACTACCCATGCACAGCAGCT
CCTGTGGCTTATATGCCACCTCCAATAGCTTCAGTAGCCGGTATGTTGGGTGATGGTTAT
AGCTATTCTATGTTGACAAGAAGTGCATCTTCAGTGCTCAAAAAGTCATACACAAGTGAT
GAGGAGCTTGAGCTATTGGATTCACCCTTGAATTTTATCATTAGCGATGGCACTGAAGCT
TCACATTCTTTAGCAAAACAGAGTTCCATGCCAAAAAGTAGTGGAAGGCAGAGGTACCAA
CTCCTTCGGGAGGTTTGGGATAACAGTGAGTAA