Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400052226
CDS Infomation

pacid=37426209 polypeptide=PGSC0003DMP400035207 locus=PGSC0003DMG400020257 ID=PGSC0003DMT400052226.v4.03 annot-version=v4.03
Sequence

ATGGCGGGAAAGGAGGACAGTAGCAAAAATACGGCACCGAATTCGAAGTCGGAGAAAATG
GAGGACGAAAAATCGGAGGTATCATGGAGGAAAGAAGTCGACACGAATCTCAAGAGGCTC
CATTCTATGCTATTTGGAGCAGACGTAGCTCTCAAAAGTAAGGATTTCAGTTCTGCAACA
GTACTTGGACTAGGACTTATCGGCTTCCTCGATTCCCATTCTCATTCAGAAGTCGACGAG
GCCTTCATTCGTCCTATTCGTCGTGAAGCTCTGTCAAATTTTGATTCTGCTCGAAGCTCC
CTCATAACTGAATCCGATCGCCATGCCTTTGAACAAGCAGGGAGAGATCCAGGCTGCATA
TTTGCCCAAGGAAAAAATATTGACATTGAGAAGATTAAGCAGTCTAAGTACTTTCTTTCT
CTTTGTCAGCAACATGAAGACACAGCTAAAGGTGAACAGGGAAATCAATTAAACAGACAT
GCCAATGTGGGTAGCCGAACCTTGAAAACACCTGCACACACTAGTCCAAGAGATTTCTCC
TTGATAAAAAATAGAAGCCTTGCAAATGATAGTAGCCCAGAGATTCTTCCTGTTGATAGG
TTTCACTCAAAGCATAGCTACCCAAAGCATCAAACTGTGGACATTAAAGATGGAGAGGAA
GAAAGAACCTGTGTCAATGGTTCCAAAACAAGACGGTTGTACATGGAAAGCAGTGGCTCT
AGAGATGAAAACATTTCATCCCCCTTGTGCACTGAAGAAGCTGATGTTGATGCTTCTCCA
AATGGATTTGTCACTGCTAGAGCAAAACTGGAAATGGACACAAGACATAAGCGAGGGTTG
AGTAGATCACCAAGTGCTTCAATCTCCCCACAAAACGATAACACCTTGGTGAACAAAGGC
TGTGGAGTCAGGTCCTATGGTTTTCCACGCCGTGGCATACGGGGCAATTTTGTTCCTCCT
ATCAGAGGTAGTAGTGGCAATAATGTAGGCAATGTTACTTCACGCACTTCTGGGAAAGGA
GAAGATACACTTGATGATTCAACAAGGAGATGTTTGGAAATGTTAATTGGTCCTGATGGT
GAGCTTCCTGAGAAATTGAGGAATATAGAGCCTCGACTTATTGAGCATATCAGCAATGAG
ATTATGCACCGGGATCCCAATGTGCGGTGGAATGACATTGCTGGCCTGGAACATGCTAAA
AAATGTGTGACTGAGATGGTCATCTGGCCATTATTACGTCCAGACATATTCAAAGGCTGC
CGATCTCCAGGTCGAGGTCTTCTTCTGTTTGGTCCACCAGGAACTGGCAAAACAATGATA
GGGAAAGCTATTGCTGGCGAGGCAAAAGCAACCTTCTTTTACATATCTGCCAGCTCTTTG
ACAAGCAAGTGGATTGGAGAGGGGGAGAAGCTGGTGAGGGCACTTTTTGGAGTGGCCAGT
TGTCGTCAGCCAGCTGTTATTTTCGTTGATGAAATAGATTCTCTGTTGTCTCAGCGCAAG
TCAGAAGGTGAACATGAATCTAGTAGGCGCCTGAAGACACAATTTCTGATCGAGATGGAA
GGCTTTGACAATGTGAGCGAACAGATTCTTCTTATAGGTGCAACAAACAGGCCCCAAGAG
CTTGATGAGGCTGCAAGGAGACGGCTTACTAAAAGACTTTATGTTCCACTTCCTTCCTCA
GAAGCACGAGCTTGGATTGCCAAGAGTCTATTGGAGAAGGATGGGTTGTTTAAGCTTTCA
GATGACGATATTGTCTCCATTTGCAAATTTACGGAAGGGTATTCTGGGTCTGACATGAAG
AATTTAGTGAAGGATGCTTCCATGGGTCCATTGAGGGAAGCTCTAAGGCACGGTATTGAA
ATTACAAAGCTAAAGAAGGAGGATATGAGGCCAGTAACTCTTCAGGACTTTGAGAGTGCA
TTACAAGAGGTAAGGCCTTCTGTGTCTTTGAATGAACTTGGTGCATACGAGGACTGGAAC
AAACAGTTTGGAAGCTTAGCACTTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400035207
PEP Infomation

pacid=37426209 transcript=PGSC0003DMT400052226 locus=PGSC0003DMG400020257 ID=PGSC0003DMT400052226.v4.03 annot-version=v4.03
Sequence

MAGKEDSSKNTAPNSKSEKMEDEKSEVSWRKEVDTNLKRLHSMLFGADVALKSKDFSSAT
VLGLGLIGFLDSHSHSEVDEAFIRPIRREALSNFDSARSSLITESDRHAFEQAGRDPGCI
FAQGKNIDIEKIKQSKYFLSLCQQHEDTAKGEQGNQLNRHANVGSRTLKTPAHTSPRDFS
LIKNRSLANDSSPEILPVDRFHSKHSYPKHQTVDIKDGEEERTCVNGSKTRRLYMESSGS
RDENISSPLCTEEADVDASPNGFVTARAKLEMDTRHKRGLSRSPSASISPQNDNTLVNKG
CGVRSYGFPRRGIRGNFVPPIRGSSGNNVGNVTSRTSGKGEDTLDDSTRRCLEMLIGPDG
ELPEKLRNIEPRLIEHISNEIMHRDPNVRWNDIAGLEHAKKCVTEMVIWPLLRPDIFKGC
RSPGRGLLLFGPPGTGKTMIGKAIAGEAKATFFYISASSLTSKWIGEGEKLVRALFGVAS
CRQPAVIFVDEIDSLLSQRKSEGEHESSRRLKTQFLIEMEGFDNVSEQILLIGATNRPQE
LDEAARRRLTKRLYVPLPSSEARAWIAKSLLEKDGLFKLSDDDIVSICKFTEGYSGSDMK
NLVKDASMGPLREALRHGIEITKLKKEDMRPVTLQDFESALQEVRPSVSLNELGAYEDWN
KQFGSLAL*

Transcript Sequence

Transcript ID

PGSC0003DMT400052226
Transcript Infomation

pacid=37426209 locus=PGSC0003DMG400020257 ID=PGSC0003DMT400052226.v4.03 annot-version=v4.03
Sequence

ATGGCGGGAAAGGAGGACAGTAGCAAAAATACGGCACCGAATTCGAAGTCGGAGAAAATG
GAGGACGAAAAATCGGAGGTATCATGGAGGAAAGAAGTCGACACGAATCTCAAGAGGCTC
CATTCTATGCTATTTGGAGCAGACGTAGCTCTCAAAAGTAAGGATTTCAGTTCTGCAACA
GTACTTGGACTAGGACTTATCGGCTTCCTCGATTCCCATTCTCATTCAGAAGTCGACGAG
GCCTTCATTCGTCCTATTCGTCGTGAAGCTCTGTCAAATTTTGATTCTGCTCGAAGCTCC
CTCATAACTGAATCCGATCGCCATGCCTTTGAACAAGCAGGGAGAGATCCAGGCTGCATA
TTTGCCCAAGGAAAAAATATTGACATTGAGAAGATTAAGCAGTCTAAGTACTTTCTTTCT
CTTTGTCAGCAACATGAAGACACAGCTAAAGGTGAACAGGGAAATCAATTAAACAGACAT
GCCAATGTGGGTAGCCGAACCTTGAAAACACCTGCACACACTAGTCCAAGAGATTTCTCC
TTGATAAAAAATAGAAGCCTTGCAAATGATAGTAGCCCAGAGATTCTTCCTGTTGATAGG
TTTCACTCAAAGCATAGCTACCCAAAGCATCAAACTGTGGACATTAAAGATGGAGAGGAA
GAAAGAACCTGTGTCAATGGTTCCAAAACAAGACGGTTGTACATGGAAAGCAGTGGCTCT
AGAGATGAAAACATTTCATCCCCCTTGTGCACTGAAGAAGCTGATGTTGATGCTTCTCCA
AATGGATTTGTCACTGCTAGAGCAAAACTGGAAATGGACACAAGACATAAGCGAGGGTTG
AGTAGATCACCAAGTGCTTCAATCTCCCCACAAAACGATAACACCTTGGTGAACAAAGGC
TGTGGAGTCAGGTCCTATGGTTTTCCACGCCGTGGCATACGGGGCAATTTTGTTCCTCCT
ATCAGAGGTAGTAGTGGCAATAATGTAGGCAATGTTACTTCACGCACTTCTGGGAAAGGA
GAAGATACACTTGATGATTCAACAAGGAGATGTTTGGAAATGTTAATTGGTCCTGATGGT
GAGCTTCCTGAGAAATTGAGGAATATAGAGCCTCGACTTATTGAGCATATCAGCAATGAG
ATTATGCACCGGGATCCCAATGTGCGGTGGAATGACATTGCTGGCCTGGAACATGCTAAA
AAATGTGTGACTGAGATGGTCATCTGGCCATTATTACGTCCAGACATATTCAAAGGCTGC
CGATCTCCAGGTCGAGGTCTTCTTCTGTTTGGTCCACCAGGAACTGGCAAAACAATGATA
GGGAAAGCTATTGCTGGCGAGGCAAAAGCAACCTTCTTTTACATATCTGCCAGCTCTTTG
ACAAGCAAGTGGATTGGAGAGGGGGAGAAGCTGGTGAGGGCACTTTTTGGAGTGGCCAGT
TGTCGTCAGCCAGCTGTTATTTTCGTTGATGAAATAGATTCTCTGTTGTCTCAGCGCAAG
TCAGAAGGTGAACATGAATCTAGTAGGCGCCTGAAGACACAATTTCTGATCGAGATGGAA
GGCTTTGACAATGTGAGCGAACAGATTCTTCTTATAGGTGCAACAAACAGGCCCCAAGAG
CTTGATGAGGCTGCAAGGAGACGGCTTACTAAAAGACTTTATGTTCCACTTCCTTCCTCA
GAAGCACGAGCTTGGATTGCCAAGAGTCTATTGGAGAAGGATGGGTTGTTTAAGCTTTCA
GATGACGATATTGTCTCCATTTGCAAATTTACGGAAGGGTATTCTGGGTCTGACATGAAG
AATTTAGTGAAGGATGCTTCCATGGGTCCATTGAGGGAAGCTCTAAGGCACGGTATTGAA
ATTACAAAGCTAAAGAAGGAGGATATGAGGCCAGTAACTCTTCAGGACTTTGAGAGTGCA
TTACAAGAGGTAAGGCCTTCTGTGTCTTTGAATGAACTTGGTGCATACGAGGACTGGAAC
AAACAGTTTGGAAGCTTAGCACTTTAA