Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400052225
CDS Infomation

pacid=37424963 polypeptide=PGSC0003DMP400035206 locus=PGSC0003DMG400020256 ID=PGSC0003DMT400052225.v4.03 annot-version=v4.03
Sequence

ATGGAACTGTTCAAGATGAGGGGGCTCCATTACAGGCACCTCTGTAGTATAACCTATGTT
CCTTCTGCTCCACCATCACGCAATCCTCCCCACCTCTCTCTCCTAGCCGACCAATGTACT
TCACTGCATCAACTCAAGCAAATCCATGCCCAGATGATCATCAGTGCCCGTATCCACGAC
AATTATGCCGCCAGCCGTTTACTGTCCTTCTCTGCTCTCTCAGAATCAGGCAGCCTTTCT
TATGCAGTAAGACTTTTCGACAGTATTAACGAACCCAATTCATTCATGTGGAACACTCTC
ATAAGAGCTCAAGCTGGTAGCTCAAATCCCCGACAAGCCTTGCTTCTTTATGTAAAGATG
CAAAGACTTTGCGTCGCTCCCGGTAAACATACATTCCCTTTTGTACTAAAAGCTTGTTCC
AACGTGATGTGTATTTATGTTAGTAGACAAGTGCATTGTCATGCTATCAAATTTGGGTTA
GATTTAGATTTGCACGTTGTTAATGGTTTGATCAGGGCTTATTCCGTCTCTCGTGTATTG
AGGGATGCGCGGCAAGTGTTTGATGAAGTTCCTGAGAGAAATTTGAGTATTTGGACGACG
ATGATTTGTGGGTTTGCTCAGAATGATAGGTATGGTGATGTTATTCAGTTGTTTGAGCGT
ATGCTTGAGGATGGAATGACGCCCAACGGAGCTACATTGGCTTCTGTGCTGTCAGCTTGT
GCCCAGTCAGGTAGTTTGCAATTAGGAGAACAGATTCACGCGTATATGGAAGAAAACGGG
ATGGAATTAGGAGTGATACTTGGAACGGCATTAGTGAACATGTATGCAAAGAACGGTGCC
ATAGTAGAAGCAAACAAGTGTTTTAGCAGTATGAGAGAAAGGAACATTGCAACTTGGAAT
GCAATGATTTGCGGGTTAGCTGCCCATGGACATGGAAAAGAAGCAATTAACTTCTTTAAG
GAACTAGAACAAGAAAAAGTGAAGCCAAATGGCATTACATTAGTTGGGGTTCTGTCAGCG
TGCTGCCATGCTGGGTTATTTGACTATGGTGAAGGAATATTTCACTCCATGAACGAGTTA
TACCGTATAGATCCCAAGATTGAGCATTACGGATGCATGGTTGACATTCTTGGGCGGAAT
GGGAAACTACTAGAAGCTGAGCAGCTCATAAGAAGAATGATTTGGAAGGCTGATGTGGTT
ATCTGGGGTTCCTTATTACATGCATGTCAGAGCCATGGAAACATAGATATTGCAGAACGA
GCTGTGAAAGAAATTCTGCTTTTGAATCCAAATAGTCATGGAGTTTATGTCGTCTTATCT
AATATGTATGCAGAAGCTGAAAGATGGGACGATGTGGTAAAACTAAGGAAGCGGATGAAG
GAAGGAAGCTTAAAGAAAACACCCGGTTGGAGCCTTGTAAATGCAGCTCCATGA

Peptide Sequence

PEP ID

PGSC0003DMP400035206
PEP Infomation

pacid=37424963 transcript=PGSC0003DMT400052225 locus=PGSC0003DMG400020256 ID=PGSC0003DMT400052225.v4.03 annot-version=v4.03
Sequence

MELFKMRGLHYRHLCSITYVPSAPPSRNPPHLSLLADQCTSLHQLKQIHAQMIISARIHD
NYAASRLLSFSALSESGSLSYAVRLFDSINEPNSFMWNTLIRAQAGSSNPRQALLLYVKM
QRLCVAPGKHTFPFVLKACSNVMCIYVSRQVHCHAIKFGLDLDLHVVNGLIRAYSVSRVL
RDARQVFDEVPERNLSIWTTMICGFAQNDRYGDVIQLFERMLEDGMTPNGATLASVLSAC
AQSGSLQLGEQIHAYMEENGMELGVILGTALVNMYAKNGAIVEANKCFSSMRERNIATWN
AMICGLAAHGHGKEAINFFKELEQEKVKPNGITLVGVLSACCHAGLFDYGEGIFHSMNEL
YRIDPKIEHYGCMVDILGRNGKLLEAEQLIRRMIWKADVVIWGSLLHACQSHGNIDIAER
AVKEILLLNPNSHGVYVVLSNMYAEAERWDDVVKLRKRMKEGSLKKTPGWSLVNAAP*

Transcript Sequence

Transcript ID

PGSC0003DMT400052225
Transcript Infomation

pacid=37424963 locus=PGSC0003DMG400020256 ID=PGSC0003DMT400052225.v4.03 annot-version=v4.03
Sequence

ATGGAACTGTTCAAGATGAGGGGGCTCCATTACAGGCACCTCTGTAGTATAACCTATGTT
CCTTCTGCTCCACCATCACGCAATCCTCCCCACCTCTCTCTCCTAGCCGACCAATGTACT
TCACTGCATCAACTCAAGCAAATCCATGCCCAGATGATCATCAGTGCCCGTATCCACGAC
AATTATGCCGCCAGCCGTTTACTGTCCTTCTCTGCTCTCTCAGAATCAGGCAGCCTTTCT
TATGCAGTAAGACTTTTCGACAGTATTAACGAACCCAATTCATTCATGTGGAACACTCTC
ATAAGAGCTCAAGCTGGTAGCTCAAATCCCCGACAAGCCTTGCTTCTTTATGTAAAGATG
CAAAGACTTTGCGTCGCTCCCGGTAAACATACATTCCCTTTTGTACTAAAAGCTTGTTCC
AACGTGATGTGTATTTATGTTAGTAGACAAGTGCATTGTCATGCTATCAAATTTGGGTTA
GATTTAGATTTGCACGTTGTTAATGGTTTGATCAGGGCTTATTCCGTCTCTCGTGTATTG
AGGGATGCGCGGCAAGTGTTTGATGAAGTTCCTGAGAGAAATTTGAGTATTTGGACGACG
ATGATTTGTGGGTTTGCTCAGAATGATAGGTATGGTGATGTTATTCAGTTGTTTGAGCGT
ATGCTTGAGGATGGAATGACGCCCAACGGAGCTACATTGGCTTCTGTGCTGTCAGCTTGT
GCCCAGTCAGGTAGTTTGCAATTAGGAGAACAGATTCACGCGTATATGGAAGAAAACGGG
ATGGAATTAGGAGTGATACTTGGAACGGCATTAGTGAACATGTATGCAAAGAACGGTGCC
ATAGTAGAAGCAAACAAGTGTTTTAGCAGTATGAGAGAAAGGAACATTGCAACTTGGAAT
GCAATGATTTGCGGGTTAGCTGCCCATGGACATGGAAAAGAAGCAATTAACTTCTTTAAG
GAACTAGAACAAGAAAAAGTGAAGCCAAATGGCATTACATTAGTTGGGGTTCTGTCAGCG
TGCTGCCATGCTGGGTTATTTGACTATGGTGAAGGAATATTTCACTCCATGAACGAGTTA
TACCGTATAGATCCCAAGATTGAGCATTACGGATGCATGGTTGACATTCTTGGGCGGAAT
GGGAAACTACTAGAAGCTGAGCAGCTCATAAGAAGAATGATTTGGAAGGCTGATGTGGTT
ATCTGGGGTTCCTTATTACATGCATGTCAGAGCCATGGAAACATAGATATTGCAGAACGA
GCTGTGAAAGAAATTCTGCTTTTGAATCCAAATAGTCATGGAGTTTATGTCGTCTTATCT
AATATGTATGCAGAAGCTGAAAGATGGGACGATGTGGTAAAACTAAGGAAGCGGATGAAG
GAAGGAAGCTTAAAGAAAACACCCGGTTGGAGCCTTGTAAATGCAGCTCCATGA