Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400052217
CDS Infomation

pacid=37425614 polypeptide=PGSC0003DMP400035200 locus=PGSC0003DMG400020253 ID=PGSC0003DMT400052217.v4.03 annot-version=v4.03
Sequence

ATGCCTCTTATCCCAGAAGAGCCTTTGCTCGCCTCTAACCCAGATCGATTCTGTATGTTC
CCAATTCAGTATCCACAGATTTGGGAAATGTACAAGAAAGCCATGGCATCTTTCTGGACG
GTAGAAGAAGTCGATCTATCTTCTGATAATCGTCACTGGGAAAACCTAACATCCGGTGAA
AGACATTTCATCACTCATGTGCTTGCCTTCTTTGCCGCCTCAGACGGCATCGTTTTAGAG
AACCTCGCTGGAAGGTTCATGAAAGATGTCCAGGTTGCTGAGGCGCGTGCTTTCTATGGG
TTCCAAATCGCCATTGAGAATATCCATTCCGAGATGTACAGTTTGCTGTTGGAGTCGTAC
ATAAAGGATTCTGACGAAAAGAGCAAATTGTTCCGTGCAATCGAGACCATCCCTTGTGTT
GAAAAGAAGGCGAAATGGGCCCTTCGTTGGATCGATGGTTCCGAAACCTTCGCGGAGCGC
TTGGTGGCTTTTGCTTGTGTTGAAGGGATTTTCTTCAGCGGAAGCTTCTGTTCGATATTT
TGGTTGAAAAAACGGGGGTTAATGCCTGGATTAACCTTCTCAAATGAGTTAATTTCAAGA
GACGAAGGTTTGCACTGTGATTTTGCGTGTTTGCTTTACAGTTTGCTAAGGACGAAGCTA
ACTGAGGAGCGAGTCAGGGGAATTATTGCAGATGCTGTGGAGATAGAAAGGGAGTTCGTG
TGTGATGCTCTTCCTTGTGCTCTGGTGGGGATGAATGGAGATTTGATGAGTAAATACATA
GAATTTGTCGCTGATAGATTGTTGGATGCTTTGGGTTATGACAAGATGTACAATGCTCAG
AATCCATTTGATTGGATGGAGCTGATTAGCCTACAAGGGAAGACTAATTTCTTTGAGAAG
AGAGTTGGGGAGTATCAGAAGGCCTCTGTTATGTCCAGTTTGAATGGTAATGGTGATACC
CATGAATTCAAGCTGGATGAGGACTTCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400035200
PEP Infomation

pacid=37425614 transcript=PGSC0003DMT400052217 locus=PGSC0003DMG400020253 ID=PGSC0003DMT400052217.v4.03 annot-version=v4.03
Sequence

MPLIPEEPLLASNPDRFCMFPIQYPQIWEMYKKAMASFWTVEEVDLSSDNRHWENLTSGE
RHFITHVLAFFAASDGIVLENLAGRFMKDVQVAEARAFYGFQIAIENIHSEMYSLLLESY
IKDSDEKSKLFRAIETIPCVEKKAKWALRWIDGSETFAERLVAFACVEGIFFSGSFCSIF
WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLTEERVRGIIADAVEIEREFV
CDALPCALVGMNGDLMSKYIEFVADRLLDALGYDKMYNAQNPFDWMELISLQGKTNFFEK
RVGEYQKASVMSSLNGNGDTHEFKLDEDF*

Transcript Sequence

Transcript ID

PGSC0003DMT400052217
Transcript Infomation

pacid=37425614 locus=PGSC0003DMG400020253 ID=PGSC0003DMT400052217.v4.03 annot-version=v4.03
Sequence

ATGCCTCTTATCCCAGAAGAGCCTTTGCTCGCCTCTAACCCAGATCGATTCTGTATGTTC
CCAATTCAGTATCCACAGATTTGGGAAATGTACAAGAAAGCCATGGCATCTTTCTGGACG
GTAGAAGAAGTCGATCTATCTTCTGATAATCGTCACTGGGAAAACCTAACATCCGGTGAA
AGACATTTCATCACTCATGTGCTTGCCTTCTTTGCCGCCTCAGACGGCATCGTTTTAGAG
AACCTCGCTGGAAGGTTCATGAAAGATGTCCAGGTTGCTGAGGCGCGTGCTTTCTATGGG
TTCCAAATCGCCATTGAGAATATCCATTCCGAGATGTACAGTTTGCTGTTGGAGTCGTAC
ATAAAGGATTCTGACGAAAAGAGCAAATTGTTCCGTGCAATCGAGACCATCCCTTGTGTT
GAAAAGAAGGCGAAATGGGCCCTTCGTTGGATCGATGGTTCCGAAACCTTCGCGGAGCGC
TTGGTGGCTTTTGCTTGTGTTGAAGGGATTTTCTTCAGCGGAAGCTTCTGTTCGATATTT
TGGTTGAAAAAACGGGGGTTAATGCCTGGATTAACCTTCTCAAATGAGTTAATTTCAAGA
GACGAAGGTTTGCACTGTGATTTTGCGTGTTTGCTTTACAGTTTGCTAAGGACGAAGCTA
ACTGAGGAGCGAGTCAGGGGAATTATTGCAGATGCTGTGGAGATAGAAAGGGAGTTCGTG
TGTGATGCTCTTCCTTGTGCTCTGGTGGGGATGAATGGAGATTTGATGAGTAAATACATA
GAATTTGTCGCTGATAGATTGTTGGATGCTTTGGGTTATGACAAGATGTACAATGCTCAG
AATCCATTTGATTGGATGGAGCTGATTAGCCTACAAGGGAAGACTAATTTCTTTGAGAAG
AGAGTTGGGGAGTATCAGAAGGCCTCTGTTATGTCCAGTTTGAATGGTAATGGTGATACC
CATGAATTCAAGCTGGATGAGGACTTCTAA