Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400052215
CDS Infomation

pacid=37424267 polypeptide=PGSC0003DMP400035198 locus=PGSC0003DMG400020252 ID=PGSC0003DMT400052215.v4.03 annot-version=v4.03
Sequence

ATGGAGAGATTGAGGGGCTTGAATGTGTTGATCTTGGCAATCATAGTGATTCTTGGCGGA
GCTGAAGGGCAACTAGTAGAGAACTTCTATGGTTTTACTTGTCCTAATGTGGAATTCATA
GTTCAGCAAGCTGTGTCTATAAAGTTCAGCCAGACTTTTGTCACTATTCCAGCGACTTTG
CGTCTCTTTTTCCATGATTGCTTTGTTGAGGGATGTGACGCGTCTGTTATGATAGCTTCA
CCAAATGGAGACGCGGAAAAGGATTCCAAGGATAACCTTTCCCTTGCAGGAGATGGCTTT
GACACTGTGGTAAAGGCAAAACAAGCCGTAGAGGCTCAGTGTCCTGGAGTAGTATCATGT
GCAGATATCTTAGCTATTGCCACTAGAGACGTTGTAGTGCTGGCAGGGGGTCCTTCATAC
AATGTAGAATTGGGACGTCGTGATGGGCTCATCTCCCAGGCATCTCGGGTTGCTGGAAAA
TTGCCAGAACCTGACTTCAATCTCATTCAACTGAACACTATGTTTGCCAGCCACAATCTC
AGCCAGTTTGACATGATAGCTCTTTCAGGGGCTCACACACTTGGCTTCTCTCATTGTGAC
CGTTTTGCAAACCGTCTCTACTCATTTACCCCATCCAACCCTGTTGACCCTTCTTTGGAT
CCAGAATATGCTAAAGAACTTAAGGATATGTGCCCTCAAAATGTAGATCCATCCATCGCT
ATAAACATGGACCCTGCGACTCCACGAACCTTTGACAATGAGTATTACAAGAATCTGGTT
AAAGGAAAGGGTTTGTTCACCTCAGATCAGGTGCTCTTCACTGATGAATCGTCTCAAGGC
ACTGTTAGTGATTTTGCTAATAATGCTTTCGACTTCAATGGAGCTTTTGTCACTGCAATG
AGAAAACTCGGAAGGGTTGGTGTCAAAACTGGTGACCAAGGTGAAATAAGACTGGACTGC
ACCAGGTTCAACTCATGA

Peptide Sequence

PEP ID

PGSC0003DMP400035198
PEP Infomation

pacid=37424267 transcript=PGSC0003DMT400052215 locus=PGSC0003DMG400020252 ID=PGSC0003DMT400052215.v4.03 annot-version=v4.03
Sequence

MERLRGLNVLILAIIVILGGAEGQLVENFYGFTCPNVEFIVQQAVSIKFSQTFVTIPATL
RLFFHDCFVEGCDASVMIASPNGDAEKDSKDNLSLAGDGFDTVVKAKQAVEAQCPGVVSC
ADILAIATRDVVVLAGGPSYNVELGRRDGLISQASRVAGKLPEPDFNLIQLNTMFASHNL
SQFDMIALSGAHTLGFSHCDRFANRLYSFTPSNPVDPSLDPEYAKELKDMCPQNVDPSIA
INMDPATPRTFDNEYYKNLVKGKGLFTSDQVLFTDESSQGTVSDFANNAFDFNGAFVTAM
RKLGRVGVKTGDQGEIRLDCTRFNS*

Transcript Sequence

Transcript ID

PGSC0003DMT400052215
Transcript Infomation

pacid=37424267 locus=PGSC0003DMG400020252 ID=PGSC0003DMT400052215.v4.03 annot-version=v4.03
Sequence

ATGGAGAGATTGAGGGGCTTGAATGTGTTGATCTTGGCAATCATAGTGATTCTTGGCGGA
GCTGAAGGGCAACTAGTAGAGAACTTCTATGGTTTTACTTGTCCTAATGTGGAATTCATA
GTTCAGCAAGCTGTGTCTATAAAGTTCAGCCAGACTTTTGTCACTATTCCAGCGACTTTG
CGTCTCTTTTTCCATGATTGCTTTGTTGAGGGATGTGACGCGTCTGTTATGATAGCTTCA
CCAAATGGAGACGCGGAAAAGGATTCCAAGGATAACCTTTCCCTTGCAGGAGATGGCTTT
GACACTGTGGTAAAGGCAAAACAAGCCGTAGAGGCTCAGTGTCCTGGAGTAGTATCATGT
GCAGATATCTTAGCTATTGCCACTAGAGACGTTGTAGTGCTGGCAGGGGGTCCTTCATAC
AATGTAGAATTGGGACGTCGTGATGGGCTCATCTCCCAGGCATCTCGGGTTGCTGGAAAA
TTGCCAGAACCTGACTTCAATCTCATTCAACTGAACACTATGTTTGCCAGCCACAATCTC
AGCCAGTTTGACATGATAGCTCTTTCAGGGGCTCACACACTTGGCTTCTCTCATTGTGAC
CGTTTTGCAAACCGTCTCTACTCATTTACCCCATCCAACCCTGTTGACCCTTCTTTGGAT
CCAGAATATGCTAAAGAACTTAAGGATATGTGCCCTCAAAATGTAGATCCATCCATCGCT
ATAAACATGGACCCTGCGACTCCACGAACCTTTGACAATGAGTATTACAAGAATCTGGTT
AAAGGAAAGGGTTTGTTCACCTCAGATCAGGTGCTCTTCACTGATGAATCGTCTCAAGGC
ACTGTTAGTGATTTTGCTAATAATGCTTTCGACTTCAATGGAGCTTTTGTCACTGCAATG
AGAAAACTCGGAAGGGTTGGTGTCAAAACTGGTGACCAAGGTGAAATAAGACTGGACTGC
ACCAGGTTCAACTCATGA