Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400052202
CDS Infomation

pacid=37426542 polypeptide=PGSC0003DMP400035187 locus=PGSC0003DMG400020246 ID=PGSC0003DMT400052202.v4.03 annot-version=v4.03
Sequence

ATGGATGACGAGTATGCTAAGCTTATCAGGAGGATGAATCCTCCCAGAGTGGTGATTGAC
AATGACTCTTGTGAGAATGCAACCATTATCCAGGTTGACAGTGTCAACAAGCATGGGATT
CTTCTTCAAGTTGTGCAGGTTCTGACGGATTTAAACCTTGTTATCACGAAAGCATACATT
TCCTCTGATGGGGGATGGTTTATGGACGTGTTTAATGTGACTGATCAAGATGGAAATAAA
GTTAGAGATGAAGAAATCATCAGCTATATCCAAAAGACTCTTGAAAATGACGAGGTTCTG
TTACCCTCTTTAAGGGGAACTGTTGGCTTGATGCCTTCTGAAGAGCACACGTCCATTGAA
CTTAGCGGGACAGACAGACCTGGCTTATTGTCTGAAGTGTGCGCTGTTCTTGCTGACCTT
CACTGTAATGTGGTGAACGCTGCAATCTGGACACATAATGCTAGGGCTGCAGCTGTGGTT
CATGTTGTGGACGACATTACAGATTGTGCAATTGAAGACCCAAAACGCCTTGCTACAATC
AAGAAACTTCTTCGTAACGTCCTCAAGGGTAACAATGATTTGAAGACTGCAAAGATGACA
CTTTCACCTCCTGGATTTACACACAGGGAGAGAAGATTACACCAGATAATGTTTGATGAT
AGGGACTATGTAAAAGTTAGAAAGACAGAACAGGGCAACATTGAGGATTTGAAGTCCGGG
CCTTGTATAACTGTTTATTATTGCAGTGAAAAGGATTATACTGTGATCACTATGAGGTCA
AGGGATCGACCTAAGCTGTTGTTTGATATTGTCTGCACTTTGACTGACATGCAGTATGTG
GTCTTTCATGGAGTTGTTCACACAGGAAAGAACGAAGCTTATCAGGAATTCTACATTCGA
CATGTTGATGGGCTTCCAATAAGCTCAGAGGCTGAGCGAGAACGTGTGATTCTGTGTCTT
GAAGCAGCTATTGAGAGAAGAACCTCTGAGGGTCTGGAGCTAGAATTGTGTACAGAAGAT
CGGCTAGGACTACTATCAGATATCACTAGGATATTCAGGGAAAATAGTTTGTGTATTAAA
AGAGCAGAAATCTCAACACAAGGGGGGAAGGCAAAAGATATCTTTTATGTCACAGATGTG
ACTGGGAATCCAGTTGAGCAAAAGACAGTTGATTCAATTTGTGAGCAAGTTGGCCCAAAT
ATGCTGCATGTTAAGTGGAATCCTTGTCATTCAGAAAAGCTACCTGAAGAAGGAACAATT
AGCTACCTCTTTGGGAGTCTCTTCAAAGTTCGAACCCTCCAAAGTCTGAAGCTGATTGGA
TCCTACACTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400035187
PEP Infomation

pacid=37426542 transcript=PGSC0003DMT400052202 locus=PGSC0003DMG400020246 ID=PGSC0003DMT400052202.v4.03 annot-version=v4.03
Sequence

MDDEYAKLIRRMNPPRVVIDNDSCENATIIQVDSVNKHGILLQVVQVLTDLNLVITKAYI
SSDGGWFMDVFNVTDQDGNKVRDEEIISYIQKTLENDEVLLPSLRGTVGLMPSEEHTSIE
LSGTDRPGLLSEVCAVLADLHCNVVNAAIWTHNARAAAVVHVVDDITDCAIEDPKRLATI
KKLLRNVLKGNNDLKTAKMTLSPPGFTHRERRLHQIMFDDRDYVKVRKTEQGNIEDLKSG
PCITVYYCSEKDYTVITMRSRDRPKLLFDIVCTLTDMQYVVFHGVVHTGKNEAYQEFYIR
HVDGLPISSEAERERVILCLEAAIERRTSEGLELELCTEDRLGLLSDITRIFRENSLCIK
RAEISTQGGKAKDIFYVTDVTGNPVEQKTVDSICEQVGPNMLHVKWNPCHSEKLPEEGTI
SYLFGSLFKVRTLQSLKLIGSYT*

Transcript Sequence

Transcript ID

PGSC0003DMT400052202
Transcript Infomation

pacid=37426542 locus=PGSC0003DMG400020246 ID=PGSC0003DMT400052202.v4.03 annot-version=v4.03
Sequence

ATGGATGACGAGTATGCTAAGCTTATCAGGAGGATGAATCCTCCCAGAGTGGTGATTGAC
AATGACTCTTGTGAGAATGCAACCATTATCCAGGTTGACAGTGTCAACAAGCATGGGATT
CTTCTTCAAGTTGTGCAGGTTCTGACGGATTTAAACCTTGTTATCACGAAAGCATACATT
TCCTCTGATGGGGGATGGTTTATGGACGTGTTTAATGTGACTGATCAAGATGGAAATAAA
GTTAGAGATGAAGAAATCATCAGCTATATCCAAAAGACTCTTGAAAATGACGAGGTTCTG
TTACCCTCTTTAAGGGGAACTGTTGGCTTGATGCCTTCTGAAGAGCACACGTCCATTGAA
CTTAGCGGGACAGACAGACCTGGCTTATTGTCTGAAGTGTGCGCTGTTCTTGCTGACCTT
CACTGTAATGTGGTGAACGCTGCAATCTGGACACATAATGCTAGGGCTGCAGCTGTGGTT
CATGTTGTGGACGACATTACAGATTGTGCAATTGAAGACCCAAAACGCCTTGCTACAATC
AAGAAACTTCTTCGTAACGTCCTCAAGGGTAACAATGATTTGAAGACTGCAAAGATGACA
CTTTCACCTCCTGGATTTACACACAGGGAGAGAAGATTACACCAGATAATGTTTGATGAT
AGGGACTATGTAAAAGTTAGAAAGACAGAACAGGGCAACATTGAGGATTTGAAGTCCGGG
CCTTGTATAACTGTTTATTATTGCAGTGAAAAGGATTATACTGTGATCACTATGAGGTCA
AGGGATCGACCTAAGCTGTTGTTTGATATTGTCTGCACTTTGACTGACATGCAGTATGTG
GTCTTTCATGGAGTTGTTCACACAGGAAAGAACGAAGCTTATCAGGAATTCTACATTCGA
CATGTTGATGGGCTTCCAATAAGCTCAGAGGCTGAGCGAGAACGTGTGATTCTGTGTCTT
GAAGCAGCTATTGAGAGAAGAACCTCTGAGGGTCTGGAGCTAGAATTGTGTACAGAAGAT
CGGCTAGGACTACTATCAGATATCACTAGGATATTCAGGGAAAATAGTTTGTGTATTAAA
AGAGCAGAAATCTCAACACAAGGGGGGAAGGCAAAAGATATCTTTTATGTCACAGATGTG
ACTGGGAATCCAGTTGAGCAAAAGACAGTTGATTCAATTTGTGAGCAAGTTGGCCCAAAT
ATGCTGCATGTTAAGTGGAATCCTTGTCATTCAGAAAAGCTACCTGAAGAAGGAACAATT
AGCTACCTCTTTGGGAGTCTCTTCAAAGTTCGAACCCTCCAAAGTCTGAAGCTGATTGGA
TCCTACACTTGA