Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400052197
CDS Infomation

pacid=37427090 polypeptide=PGSC0003DMP400035182 locus=PGSC0003DMG400020244 ID=PGSC0003DMT400052197.v4.03 annot-version=v4.03
Sequence

ATGGATAATCGAAACGTTGTCGTTTGCGACAACGGCACTGGGTATGTCAAGTGTGGCTTT
GCGGGTGAGAATTTTCCCACATCTGTATTTCCTTGTGTTGTGGGGAGGCCAATGCTAAGA
TATGAAGAGTCCCTTATGGAACAAGACTTGAAGGATATTATTGTGGGAGATGAATGCTTG
AAGTTGCGCCATCAGTTGGATTTATCTTATCCCGTCAACAATGGAATTGTACAAAACTGG
GATGATATGGGGAGTGTGTGGGACCATGCATTTTTCAATGAACTGAAGATAGATCCAACA
GAATGCAAAATTCTGCTGACAGATCCACCTCTCAATCCATCTAAAAATCGTGAAATGATG
GTAGAAACCATGTTTGAGAAGTACAACTTTGCTGGTGTCTTCATCCAAATTCAAGCTGTT
CTAACATTGTATGCTCAAGGTTTGTTGACTGGGCTTGTCATCGACTCAGGTGATGGAGTT
ACACATGTTGTTCCCGTTGTAGATGGATACTCATTTCCTCACCTCACGAAAAGAATGAAT
GTAGCTGGACGGCATATAACGTCTTATATGGTTGATCTGCTACTTCGGAGAGGGTATGCA
ATGAATAGAAGTGCCGATTTTGAGACTGTCAGGGATATTAAAGAAAAGCTCTGCTATATT
AGTTATGATTACAAGAGAGAATATCAGTTGGGGCTTGAAACTACAATTCTTGTTAAGAAT
TATACTCTTCCAGATGGGAGGGTACTTAAAGTTGGCACAGAGAGGTTCCAGGCACCTGAG
GCTCTTTTTACTCCAGATCTTATTGATGTTGAAGGTGATGGCATGGCTGACATGGTATTT
CGCTGCATCCAGGAGATGGATATTGACAACAGGATGATGCTCTACCAGCATATTGTTTTG
AGTGGTGGAAGTACCATGTATCCTGGCTTACCTAGTCGCCTTGAGAAAGAAATTTTGGAC
CGCTATCTTGATGTTGTTCTGAAGGGGAACAAAGATGGTTTGAAGAAATTGCGCTTACGA
ATAGAAGATCCACCAAGAAGAAAGCATATGGTGTATCTCGGTGGTGCAGTTCTGGCCGGG
ATTATGAAGGTATGGTGGTATCTATTTCCTCTCTGTAGCCCCATCTCTGCTCCTTCCCAG
ATCATGCATATAAAAGAGTATTTATTCCCAGGAGAAATAAAAAGAAAGCCAATCTCTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400035182
PEP Infomation

pacid=37427090 transcript=PGSC0003DMT400052197 locus=PGSC0003DMG400020244 ID=PGSC0003DMT400052197.v4.03 annot-version=v4.03
Sequence

MDNRNVVVCDNGTGYVKCGFAGENFPTSVFPCVVGRPMLRYEESLMEQDLKDIIVGDECL
KLRHQLDLSYPVNNGIVQNWDDMGSVWDHAFFNELKIDPTECKILLTDPPLNPSKNREMM
VETMFEKYNFAGVFIQIQAVLTLYAQGLLTGLVIDSGDGVTHVVPVVDGYSFPHLTKRMN
VAGRHITSYMVDLLLRRGYAMNRSADFETVRDIKEKLCYISYDYKREYQLGLETTILVKN
YTLPDGRVLKVGTERFQAPEALFTPDLIDVEGDGMADMVFRCIQEMDIDNRMMLYQHIVL
SGGSTMYPGLPSRLEKEILDRYLDVVLKGNKDGLKKLRLRIEDPPRRKHMVYLGGAVLAG
IMKVWWYLFPLCSPISAPSQIMHIKEYLFPGEIKRKPIS*

Transcript Sequence

Transcript ID

PGSC0003DMT400052197
Transcript Infomation

pacid=37427090 locus=PGSC0003DMG400020244 ID=PGSC0003DMT400052197.v4.03 annot-version=v4.03
Sequence

ATGGATAATCGAAACGTTGTCGTTTGCGACAACGGCACTGGGTATGTCAAGTGTGGCTTT
GCGGGTGAGAATTTTCCCACATCTGTATTTCCTTGTGTTGTGGGGAGGCCAATGCTAAGA
TATGAAGAGTCCCTTATGGAACAAGACTTGAAGGATATTATTGTGGGAGATGAATGCTTG
AAGTTGCGCCATCAGTTGGATTTATCTTATCCCGTCAACAATGGAATTGTACAAAACTGG
GATGATATGGGGAGTGTGTGGGACCATGCATTTTTCAATGAACTGAAGATAGATCCAACA
GAATGCAAAATTCTGCTGACAGATCCACCTCTCAATCCATCTAAAAATCGTGAAATGATG
GTAGAAACCATGTTTGAGAAGTACAACTTTGCTGGTGTCTTCATCCAAATTCAAGCTGTT
CTAACATTGTATGCTCAAGGTTTGTTGACTGGGCTTGTCATCGACTCAGGTGATGGAGTT
ACACATGTTGTTCCCGTTGTAGATGGATACTCATTTCCTCACCTCACGAAAAGAATGAAT
GTAGCTGGACGGCATATAACGTCTTATATGGTTGATCTGCTACTTCGGAGAGGGTATGCA
ATGAATAGAAGTGCCGATTTTGAGACTGTCAGGGATATTAAAGAAAAGCTCTGCTATATT
AGTTATGATTACAAGAGAGAATATCAGTTGGGGCTTGAAACTACAATTCTTGTTAAGAAT
TATACTCTTCCAGATGGGAGGGTACTTAAAGTTGGCACAGAGAGGTTCCAGGCACCTGAG
GCTCTTTTTACTCCAGATCTTATTGATGTTGAAGGTGATGGCATGGCTGACATGGTATTT
CGCTGCATCCAGGAGATGGATATTGACAACAGGATGATGCTCTACCAGCATATTGTTTTG
AGTGGTGGAAGTACCATGTATCCTGGCTTACCTAGTCGCCTTGAGAAAGAAATTTTGGAC
CGCTATCTTGATGTTGTTCTGAAGGGGAACAAAGATGGTTTGAAGAAATTGCGCTTACGA
ATAGAAGATCCACCAAGAAGAAAGCATATGGTGTATCTCGGTGGTGCAGTTCTGGCCGGG
ATTATGAAGGTATGGTGGTATCTATTTCCTCTCTGTAGCCCCATCTCTGCTCCTTCCCAG
ATCATGCATATAAAAGAGTATTTATTCCCAGGAGAAATAAAAAGAAAGCCAATCTCTTAA