Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400052190
CDS Infomation

pacid=37424346 polypeptide=PGSC0003DMP400035179 locus=PGSC0003DMG400020242 ID=PGSC0003DMT400052190.v4.03 annot-version=v4.03
Sequence

ATGGGTCCCTATTGTCCATGCTTCGGGATCGGGAGCAAGAAAAGGGAGATCAACTTGAAA
ACCAACACTAATTACGTCCCTATTGAACCAACTAGGGACCCTCCTAATCCTATCAACTCT
CATCTTCCTCCAGATAATCCCATCACACTGCTGGAGCCCAGACAGCAACTACTGATATCA
AAAGATGATTCTCCTCCGAGAAGCAACCTTCCAACTTTTTCTTACCGGGATCTTGCAACC
GCCACAAACAATTTCAGGCGAGAATCCATTATCGGGGAAGGTGGCTTTGGGCCAGTATTC
AAAGGGCAACTTACAACTAGTCAGGTTGTGGCTGTTAAGAAGCTAAATCATTCAGGTCTT
CAAGGGGATAAGGAGTTCTTTGTCGAGGTTCACATGCTCTCACTGATGCGCCACCCTAAC
CTGGTTAATCTAATTGGTTACTGCACTGAAGGAGAGCAGCGTCTTCTTATCTATGAATTC
ATGCCTCTAGGATCTTTGGCATATCATCTCCATGATATTACGCCTGACATGAAGCCATTG
GATTGGGATACCAGGATGGTAATAGCATCTGGTGCTGCCAAAGGCCTGGATTACCTTCAC
AACCAAGCTGATCGTCCTGTTATCTACAGGGACCTTAAGTCGGCAAACATATTATTGGGT
GAGGGTTTCCATGCTAAACTTTCTGACTTTGGTCTTGCAAAGTTTGGCCCAATTGCAGAC
AATACACATGTTTCAACTCGGGTAATGGGCACTCATGGGTATTGCGCACCTGAGTATGCT
GGAACCGGAAAACTGACTATGAAATCAGACATTTATAGTTTTGGTGTGCTCTTGTTGGAG
CTAATTACTGGATGTAGAGCAATGGATGACTCTCATGAACATGGAAAAGAAATGCTTGTT
GACTGGGCACGTCCTATGTTGAAAGACCGCATGAACTATGTACAATTAGCGGATCCAATG
TTAAGAGGCAAGTTTCCACAATCTGTCTTCCGCAGGGTAGTAGAACTGGCCTTAATGTGT
GTTCAGGATGATCCCCATGCTCGACCTCACACGAAAGACATTGTGCTTGCTTTGAGTTAC
TTTGCATCCCAAAAGCATGATTCACATGCAGGTCAGTCAAATCAGATTGGATCTCAGGGA
GACGGGAGGACATCCCCTGTTGAAGAACTAACGAATGGAAGCTCTGTTGATTTTAATGGA
GCTCAGATCGATGTAACAGATATAAGAGCTTTGAACAAGGATCAAGAGCGGGAGCGAGCT
GTTGCAGAGGCCAAGAAGTGGGGCGAGACCTGGAGAGAGAAAGGGAAACAGAATGCGGAT
GATGATTTAGATTATAAATCAAGGTGGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400035179
PEP Infomation

pacid=37424346 transcript=PGSC0003DMT400052190 locus=PGSC0003DMG400020242 ID=PGSC0003DMT400052190.v4.03 annot-version=v4.03
Sequence

MGPYCPCFGIGSKKREINLKTNTNYVPIEPTRDPPNPINSHLPPDNPITLLEPRQQLLIS
KDDSPPRSNLPTFSYRDLATATNNFRRESIIGEGGFGPVFKGQLTTSQVVAVKKLNHSGL
QGDKEFFVEVHMLSLMRHPNLVNLIGYCTEGEQRLLIYEFMPLGSLAYHLHDITPDMKPL
DWDTRMVIASGAAKGLDYLHNQADRPVIYRDLKSANILLGEGFHAKLSDFGLAKFGPIAD
NTHVSTRVMGTHGYCAPEYAGTGKLTMKSDIYSFGVLLLELITGCRAMDDSHEHGKEMLV
DWARPMLKDRMNYVQLADPMLRGKFPQSVFRRVVELALMCVQDDPHARPHTKDIVLALSY
FASQKHDSHAGQSNQIGSQGDGRTSPVEELTNGSSVDFNGAQIDVTDIRALNKDQERERA
VAEAKKWGETWREKGKQNADDDLDYKSRW*

Transcript Sequence

Transcript ID

PGSC0003DMT400052190
Transcript Infomation

pacid=37424346 locus=PGSC0003DMG400020242 ID=PGSC0003DMT400052190.v4.03 annot-version=v4.03
Sequence

ATGGGTCCCTATTGTCCATGCTTCGGGATCGGGAGCAAGAAAAGGGAGATCAACTTGAAA
ACCAACACTAATTACGTCCCTATTGAACCAACTAGGGACCCTCCTAATCCTATCAACTCT
CATCTTCCTCCAGATAATCCCATCACACTGCTGGAGCCCAGACAGCAACTACTGATATCA
AAAGATGATTCTCCTCCGAGAAGCAACCTTCCAACTTTTTCTTACCGGGATCTTGCAACC
GCCACAAACAATTTCAGGCGAGAATCCATTATCGGGGAAGGTGGCTTTGGGCCAGTATTC
AAAGGGCAACTTACAACTAGTCAGGTTGTGGCTGTTAAGAAGCTAAATCATTCAGGTCTT
CAAGGGGATAAGGAGTTCTTTGTCGAGGTTCACATGCTCTCACTGATGCGCCACCCTAAC
CTGGTTAATCTAATTGGTTACTGCACTGAAGGAGAGCAGCGTCTTCTTATCTATGAATTC
ATGCCTCTAGGATCTTTGGCATATCATCTCCATGATATTACGCCTGACATGAAGCCATTG
GATTGGGATACCAGGATGGTAATAGCATCTGGTGCTGCCAAAGGCCTGGATTACCTTCAC
AACCAAGCTGATCGTCCTGTTATCTACAGGGACCTTAAGTCGGCAAACATATTATTGGGT
GAGGGTTTCCATGCTAAACTTTCTGACTTTGGTCTTGCAAAGTTTGGCCCAATTGCAGAC
AATACACATGTTTCAACTCGGGTAATGGGCACTCATGGGTATTGCGCACCTGAGTATGCT
GGAACCGGAAAACTGACTATGAAATCAGACATTTATAGTTTTGGTGTGCTCTTGTTGGAG
CTAATTACTGGATGTAGAGCAATGGATGACTCTCATGAACATGGAAAAGAAATGCTTGTT
GACTGGGCACGTCCTATGTTGAAAGACCGCATGAACTATGTACAATTAGCGGATCCAATG
TTAAGAGGCAAGTTTCCACAATCTGTCTTCCGCAGGGTAGTAGAACTGGCCTTAATGTGT
GTTCAGGATGATCCCCATGCTCGACCTCACACGAAAGACATTGTGCTTGCTTTGAGTTAC
TTTGCATCCCAAAAGCATGATTCACATGCAGGTCAGTCAAATCAGATTGGATCTCAGGGA
GACGGGAGGACATCCCCTGTTGAAGAACTAACGAATGGAAGCTCTGTTGATTTTAATGGA
GCTCAGATCGATGTAACAGATATAAGAGCTTTGAACAAGGATCAAGAGCGGGAGCGAGCT
GTTGCAGAGGCCAAGAAGTGGGGCGAGACCTGGAGAGAGAAAGGGAAACAGAATGCGGAT
GATGATTTAGATTATAAATCAAGGTGGTGA