Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400052187
CDS Infomation

pacid=37425466 polypeptide=PGSC0003DMP400035176 locus=PGSC0003DMG400020241 ID=PGSC0003DMT400052187.v4.03 annot-version=v4.03
Sequence

ATGTATGTGGTTCCTCCTCCGAAACGACCCGATCCATTGTCTGGATCCATTAATGAGTCG
GATGACTTGCGGATTTACCAGACATGGAAAGGAAGCAATATATTTTTCTTCCAAGGAAGG
TTCATATTTGGGCCAGACGCAAGATCCCTAGCACTGACCATATTTCTCATAGTGGCCCCT
GTCTCAGTTTTCTGCGTCTTTGTTGCTAGAAAGCTGATGGATGATTTTTCAAATCACCTG
GGGATATTGATTATGGTTGTAGTCATTGTGTTCACATTCTATGTTTTAGTTCTACTCCTT
CTCACATCTGGAAGGGATCCAGGAATAATTCCTCGTAATGCACACCCTCCAGAACCAGAA
GGTTATGATGGTACTGTAGAAGGTGGTGGACAAACCCCTCAATTACGTTTGCCACGCATT
AAAGAAGTTGAGGTCAATGGCATTACCGTGAAGATCAAATACTGTGACACCTGCATGCTT
TATAGACCTCCCCGTTGTTCTCACTGTTCAATCTGCAATAACTGCGTTGAAAGATTTGAC
CATCACTGCCCTTGGGTAGGGCAATGCATTGGGCTGCGAAACTACCGTTTTTTCTTCATG
TTTGTCTTCTCTACAACACTTCTTTGCATATATGTTTTTGGGTTCTGCTGGGTCTACATT
AAGAGAATCATGGTTCTAGATGACACCACCATATGGAAAGCAATGATCAAAACACCGGCC
TCCATTGTTCTGATAGCATACACTTTTATATCAGTGTGGTTTGTTGGAGGTCTTACTGCT
TTTCATCTATACCTCATCAGTACTAATCAGACTACTTATGAGAATTTTAGATACCGATAT
GATTGGCGTGCCAACCCCTACAACAGAGGAGTGATACAGAATTTCAAGGAGATATTTTGT
ACTAGTATTCCTCCATCCAAGAACAATTTCCGTGCAAAGGTGCCCAGGGAACCCAAGGTG
CCAACTCGGTCTGCAGGTGGGGGTTTTGTGAGTCCAAACATGGGGAAGGCTGTGGAGGAC
ATAGAAATGGGCAGGAAAGCGGTTTGGAGTGAAGTAGGGGATAACGAAGGACAACTTAGC
GACAACGATGGCCTGAACATTAAAGATGGCATGTTAGGGCAAATGTCTCCTGAGATAAGA
ACTACAGTAGATGAGAGTGATCGTGCAGGAATACATCCTAGAGGATCAAGCTGGGGAAGG
AAAAGTGGAAGCTGGGAGATGTCACCTGAAGTTCTTGCTTTGGCATCAAGAGTGGGAGAA
GCTAATCGAACAGGTGGGAGTAGCAGACCAGCAGATGAAAAGTTGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400035176
PEP Infomation

pacid=37425466 transcript=PGSC0003DMT400052187 locus=PGSC0003DMG400020241 ID=PGSC0003DMT400052187.v4.03 annot-version=v4.03
Sequence

MYVVPPPKRPDPLSGSINESDDLRIYQTWKGSNIFFFQGRFIFGPDARSLALTIFLIVAP
VSVFCVFVARKLMDDFSNHLGILIMVVVIVFTFYVLVLLLLTSGRDPGIIPRNAHPPEPE
GYDGTVEGGGQTPQLRLPRIKEVEVNGITVKIKYCDTCMLYRPPRCSHCSICNNCVERFD
HHCPWVGQCIGLRNYRFFFMFVFSTTLLCIYVFGFCWVYIKRIMVLDDTTIWKAMIKTPA
SIVLIAYTFISVWFVGGLTAFHLYLISTNQTTYENFRYRYDWRANPYNRGVIQNFKEIFC
TSIPPSKNNFRAKVPREPKVPTRSAGGGFVSPNMGKAVEDIEMGRKAVWSEVGDNEGQLS
DNDGLNIKDGMLGQMSPEIRTTVDESDRAGIHPRGSSWGRKSGSWEMSPEVLALASRVGE
ANRTGGSSRPADEKL*

Transcript Sequence

Transcript ID

PGSC0003DMT400052187
Transcript Infomation

pacid=37425466 locus=PGSC0003DMG400020241 ID=PGSC0003DMT400052187.v4.03 annot-version=v4.03
Sequence

ATGTATGTGGTTCCTCCTCCGAAACGACCCGATCCATTGTCTGGATCCATTAATGAGTCG
GATGACTTGCGGATTTACCAGACATGGAAAGGAAGCAATATATTTTTCTTCCAAGGAAGG
TTCATATTTGGGCCAGACGCAAGATCCCTAGCACTGACCATATTTCTCATAGTGGCCCCT
GTCTCAGTTTTCTGCGTCTTTGTTGCTAGAAAGCTGATGGATGATTTTTCAAATCACCTG
GGGATATTGATTATGGTTGTAGTCATTGTGTTCACATTCTATGTTTTAGTTCTACTCCTT
CTCACATCTGGAAGGGATCCAGGAATAATTCCTCGTAATGCACACCCTCCAGAACCAGAA
GGTTATGATGGTACTGTAGAAGGTGGTGGACAAACCCCTCAATTACGTTTGCCACGCATT
AAAGAAGTTGAGGTCAATGGCATTACCGTGAAGATCAAATACTGTGACACCTGCATGCTT
TATAGACCTCCCCGTTGTTCTCACTGTTCAATCTGCAATAACTGCGTTGAAAGATTTGAC
CATCACTGCCCTTGGGTAGGGCAATGCATTGGGCTGCGAAACTACCGTTTTTTCTTCATG
TTTGTCTTCTCTACAACACTTCTTTGCATATATGTTTTTGGGTTCTGCTGGGTCTACATT
AAGAGAATCATGGTTCTAGATGACACCACCATATGGAAAGCAATGATCAAAACACCGGCC
TCCATTGTTCTGATAGCATACACTTTTATATCAGTGTGGTTTGTTGGAGGTCTTACTGCT
TTTCATCTATACCTCATCAGTACTAATCAGACTACTTATGAGAATTTTAGATACCGATAT
GATTGGCGTGCCAACCCCTACAACAGAGGAGTGATACAGAATTTCAAGGAGATATTTTGT
ACTAGTATTCCTCCATCCAAGAACAATTTCCGTGCAAAGGTGCCCAGGGAACCCAAGGTG
CCAACTCGGTCTGCAGGTGGGGGTTTTGTGAGTCCAAACATGGGGAAGGCTGTGGAGGAC
ATAGAAATGGGCAGGAAAGCGGTTTGGAGTGAAGTAGGGGATAACGAAGGACAACTTAGC
GACAACGATGGCCTGAACATTAAAGATGGCATGTTAGGGCAAATGTCTCCTGAGATAAGA
ACTACAGTAGATGAGAGTGATCGTGCAGGAATACATCCTAGAGGATCAAGCTGGGGAAGG
AAAAGTGGAAGCTGGGAGATGTCACCTGAAGTTCTTGCTTTGGCATCAAGAGTGGGAGAA
GCTAATCGAACAGGTGGGAGTAGCAGACCAGCAGATGAAAAGTTGTGA