Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400052139
CDS Infomation

pacid=37427629 polypeptide=PGSC0003DMP400035137 locus=PGSC0003DMG400020231 ID=PGSC0003DMT400052139.v4.03 annot-version=v4.03
Sequence

ATGGAAGGAAGGACGACCCATCATAGCAACAATACCACTATTATTAACAGCACTAGCTGT
ATTTATACTTCAAAATCTCTGTTTCCGATCTCTCCCACTGCCAAGTCCCCGCTGAACAGA
CCGTCAATCAGCGTCAAGAGGCCTTCCTTCACGTTCCTTTCTCGCTTACCGTCTGAATTC
GGGGGCAGTCCCTTGGTGAGGATGGAAGACCCGTTCACTGCTTCATTGTCGTCATCGATT
ACTGTTAGTCCAAGGAAGAACTTGACGACATCCAATCACTTGCGCCATGTGGAATCCATG
GCCCACTTGCCTTCCGGAGCCGGCAGGATAACCAGATTGAATGCTCTTATCTTAGGCGAG
GCACTTGCTTCCGAGGAGGATGATCTCGTCTTTCCCAGCGAAGATTTCTCTAGCCAGTCT
CATGTTTCTTCTCCTCAGAAGTATTTGGAGATGTATCAAAGGTCGGTCCACGATCCCTCA
GGATTCTGGTCTGACATTGCATCAGAATTTTACTGGAGAGAGAAATGGGGCCAGCAGGTT
TACCATGAGAATTTTGATGTTCGAAAGGGGAAAATCAAGATCGAGTGGTTCAAGGGTGGA
ATGACAAATATCTGCTACAACTGCTTGGATAGAAACATCGAGTCTGGAAAGGGTGACAAA
ACAGCAATTTACTGGGAAGGAAATGAACCTGGTCTTGATAGTTCTATGACGTACAATCAA
CTCTTGGCTAGAGTTTGCCAGCTAGCAAATTATTTGAAAGATGTTGGAGTCCACAAGGGT
GATGCAGTTGTCATCTACTTACCCATGCTTATGGAGCTACCAATTGCAATGCTTGCTTGT
GCTCGTATTGGTGCCATTCACTCGGTTGTGTTTGCTGGTTTCTCAGCTGAATCTCTTGCT
CAAAGGATCATAGATTGCAGACCGAAGGTTGTCATAACATGCAATGCTGTTAGGAGGGGG
TCCAAGATTATTTATCTCAAAGAAATTGTTGATAGTGCCCTTCTAGAATCTGCTCAGAAG
GGCATCGTTACAGATGTGTGTTTGACATATGAAAATGATTCAGCAATGAAAAAGGAAATG
ACTAAATGGACCAAGGGGAGAGACATTTGGTGGCAGGATGTTATTCTGAAATATCCAGTA
ACATGTGATGTGGAGTGGGTTGATGCGGAAGATCCCCTTTTCCTGCTTTACACTAGTGGG
AGTACCGGAAAGCCTAAGGGTGTCTTGCATACAACGGGAGGATATATGGTGTACACTGCT
ACTACATTCAAGTATGCATTTGACTACAAGCCGACAGACATATATTGGTGTACAGCTGAC
TGTGGTTGGATTACTGGGCATAGTTATGTAACCTATGGACCTTTGCTAAATGGAGCAACT
GTTGTGGTTTTTGAAGGGGCCCCAAATTATCCCGATGTCGGGCGTTGTTGGGATATTGTT
GATAAGTATAAGGTTTCAATATTTTATACAGCTCCAACACTGGTGAGATCTCTGATGCGT
GAGGGAGACGAGCATGTCTCTCGATATTCACGCAAATCTTTACGGGTGCTTGGAAGTGTG
GGTGAGCCTATTAATCCAAGTGCATGGAGGTGGTTTTTCAATGTGATAGGTGATGCAAGG
TGCCCCATATCTGATACATGGTGGCAAACAGAAACCGGTGGCTTCATGATTACTCCTTTA
CCAGGAGCGTGGCCGCAGAAACCTGGTTCTGCTACTTTTCCTTTCTTTGGAGTCCAGCCA
GTAATAGTGGATGAGAAAGGTGTTGAGATTGAAGGTGAGTGCAGTGGGTATCTGTGCGTG
AAAAGCTCGTGGCCTGGGGCATTCCGAACACTTCATGGGGATCATGAGAGATATGAAACC
ACATATTTTAGTGCCTTCCCGGGCTATTATTTCAGTGGTGATGGCTGCAGCAGGGACAAA
GATGGTTACTACTGGCTCACCGGAAGAGTAGATGATGTGATTAATGTGAGTGGACATCGT
ATTGGCACAGCCGAAGTGGAATCTGCTCTAGTTTCACATCCTCAGTGTGCTGAAGCAGCT
GTGGTTGGTGTGGAGCATGAGGTTAAAGGACAGGGGATATATGCATTTGTTACTCTAGTC
GAAGGTGTTCCATACAGCGATGACCTGCGAAAAAGTCTTGTGGTGGTTGTTAGGAATCAG
ATTGGGGCTTTTGCAGCGCCAGACAAGATACATTGGGCACCAGGTCTTCCAAAGACGAGA
AGTGGGAAAATAATGAGAAGAATTCTGAGGAAAATCGCTTCCAGGCAGTTAGATGAGCTT
GGGGACACTAGTACCCTTGCAGACCCAACTGTGGTTGATCAGCTTATTGCACTTGCTGAT
TGCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400035137
PEP Infomation

pacid=37427629 transcript=PGSC0003DMT400052139 locus=PGSC0003DMG400020231 ID=PGSC0003DMT400052139.v4.03 annot-version=v4.03
Sequence

MEGRTTHHSNNTTIINSTSCIYTSKSLFPISPTAKSPLNRPSISVKRPSFTFLSRLPSEF
GGSPLVRMEDPFTASLSSSITVSPRKNLTTSNHLRHVESMAHLPSGAGRITRLNALILGE
ALASEEDDLVFPSEDFSSQSHVSSPQKYLEMYQRSVHDPSGFWSDIASEFYWREKWGQQV
YHENFDVRKGKIKIEWFKGGMTNICYNCLDRNIESGKGDKTAIYWEGNEPGLDSSMTYNQ
LLARVCQLANYLKDVGVHKGDAVVIYLPMLMELPIAMLACARIGAIHSVVFAGFSAESLA
QRIIDCRPKVVITCNAVRRGSKIIYLKEIVDSALLESAQKGIVTDVCLTYENDSAMKKEM
TKWTKGRDIWWQDVILKYPVTCDVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVYTA
TTFKYAFDYKPTDIYWCTADCGWITGHSYVTYGPLLNGATVVVFEGAPNYPDVGRCWDIV
DKYKVSIFYTAPTLVRSLMREGDEHVSRYSRKSLRVLGSVGEPINPSAWRWFFNVIGDAR
CPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCV
KSSWPGAFRTLHGDHERYETTYFSAFPGYYFSGDGCSRDKDGYYWLTGRVDDVINVSGHR
IGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSDDLRKSLVVVVRNQ
IGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASRQLDELGDTSTLADPTVVDQLIALAD
C*

Transcript Sequence

Transcript ID

PGSC0003DMT400052139
Transcript Infomation

pacid=37427629 locus=PGSC0003DMG400020231 ID=PGSC0003DMT400052139.v4.03 annot-version=v4.03
Sequence

ATGGAAGGAAGGACGACCCATCATAGCAACAATACCACTATTATTAACAGCACTAGCTGT
ATTTATACTTCAAAATCTCTGTTTCCGATCTCTCCCACTGCCAAGTCCCCGCTGAACAGA
CCGTCAATCAGCGTCAAGAGGCCTTCCTTCACGTTCCTTTCTCGCTTACCGTCTGAATTC
GGGGGCAGTCCCTTGGTGAGGATGGAAGACCCGTTCACTGCTTCATTGTCGTCATCGATT
ACTGTTAGTCCAAGGAAGAACTTGACGACATCCAATCACTTGCGCCATGTGGAATCCATG
GCCCACTTGCCTTCCGGAGCCGGCAGGATAACCAGATTGAATGCTCTTATCTTAGGCGAG
GCACTTGCTTCCGAGGAGGATGATCTCGTCTTTCCCAGCGAAGATTTCTCTAGCCAGTCT
CATGTTTCTTCTCCTCAGAAGTATTTGGAGATGTATCAAAGGTCGGTCCACGATCCCTCA
GGATTCTGGTCTGACATTGCATCAGAATTTTACTGGAGAGAGAAATGGGGCCAGCAGGTT
TACCATGAGAATTTTGATGTTCGAAAGGGGAAAATCAAGATCGAGTGGTTCAAGGGTGGA
ATGACAAATATCTGCTACAACTGCTTGGATAGAAACATCGAGTCTGGAAAGGGTGACAAA
ACAGCAATTTACTGGGAAGGAAATGAACCTGGTCTTGATAGTTCTATGACGTACAATCAA
CTCTTGGCTAGAGTTTGCCAGCTAGCAAATTATTTGAAAGATGTTGGAGTCCACAAGGGT
GATGCAGTTGTCATCTACTTACCCATGCTTATGGAGCTACCAATTGCAATGCTTGCTTGT
GCTCGTATTGGTGCCATTCACTCGGTTGTGTTTGCTGGTTTCTCAGCTGAATCTCTTGCT
CAAAGGATCATAGATTGCAGACCGAAGGTTGTCATAACATGCAATGCTGTTAGGAGGGGG
TCCAAGATTATTTATCTCAAAGAAATTGTTGATAGTGCCCTTCTAGAATCTGCTCAGAAG
GGCATCGTTACAGATGTGTGTTTGACATATGAAAATGATTCAGCAATGAAAAAGGAAATG
ACTAAATGGACCAAGGGGAGAGACATTTGGTGGCAGGATGTTATTCTGAAATATCCAGTA
ACATGTGATGTGGAGTGGGTTGATGCGGAAGATCCCCTTTTCCTGCTTTACACTAGTGGG
AGTACCGGAAAGCCTAAGGGTGTCTTGCATACAACGGGAGGATATATGGTGTACACTGCT
ACTACATTCAAGTATGCATTTGACTACAAGCCGACAGACATATATTGGTGTACAGCTGAC
TGTGGTTGGATTACTGGGCATAGTTATGTAACCTATGGACCTTTGCTAAATGGAGCAACT
GTTGTGGTTTTTGAAGGGGCCCCAAATTATCCCGATGTCGGGCGTTGTTGGGATATTGTT
GATAAGTATAAGGTTTCAATATTTTATACAGCTCCAACACTGGTGAGATCTCTGATGCGT
GAGGGAGACGAGCATGTCTCTCGATATTCACGCAAATCTTTACGGGTGCTTGGAAGTGTG
GGTGAGCCTATTAATCCAAGTGCATGGAGGTGGTTTTTCAATGTGATAGGTGATGCAAGG
TGCCCCATATCTGATACATGGTGGCAAACAGAAACCGGTGGCTTCATGATTACTCCTTTA
CCAGGAGCGTGGCCGCAGAAACCTGGTTCTGCTACTTTTCCTTTCTTTGGAGTCCAGCCA
GTAATAGTGGATGAGAAAGGTGTTGAGATTGAAGGTGAGTGCAGTGGGTATCTGTGCGTG
AAAAGCTCGTGGCCTGGGGCATTCCGAACACTTCATGGGGATCATGAGAGATATGAAACC
ACATATTTTAGTGCCTTCCCGGGCTATTATTTCAGTGGTGATGGCTGCAGCAGGGACAAA
GATGGTTACTACTGGCTCACCGGAAGAGTAGATGATGTGATTAATGTGAGTGGACATCGT
ATTGGCACAGCCGAAGTGGAATCTGCTCTAGTTTCACATCCTCAGTGTGCTGAAGCAGCT
GTGGTTGGTGTGGAGCATGAGGTTAAAGGACAGGGGATATATGCATTTGTTACTCTAGTC
GAAGGTGTTCCATACAGCGATGACCTGCGAAAAAGTCTTGTGGTGGTTGTTAGGAATCAG
ATTGGGGCTTTTGCAGCGCCAGACAAGATACATTGGGCACCAGGTCTTCCAAAGACGAGA
AGTGGGAAAATAATGAGAAGAATTCTGAGGAAAATCGCTTCCAGGCAGTTAGATGAGCTT
GGGGACACTAGTACCCTTGCAGACCCAACTGTGGTTGATCAGCTTATTGCACTTGCTGAT
TGCTAA