Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400052135
CDS Infomation

pacid=37424393 polypeptide=PGSC0003DMP400035134 locus=PGSC0003DMG400020230 ID=PGSC0003DMT400052135.v4.03 annot-version=v4.03
Sequence

ATGGTGAACGATGGAGATGATAAAGTTGAAGGGTTGTTGAGCCCCAAGTTCCGATCGGTG
GCTGCTATGGCTGGCTGGGATGAAGAGGCTCTTCTCATGGCCAGTCTTGTTGTCGAAGAC
ACACCCGATCGCCTTCCTAAACAAAAGAAACGTTCTGATTTGCTGCATTTCAAGACTCCC
CCAACAAATTCTAGAAGGAAAAGAAGGGCTCAGAAAAGGAGCCCTGCATCCATAACTGCA
ACTGTTCTTGATCTCGACGACCAAGACACTGCAAAGCAAGAAAGCGAGAAAAAGGAGGCG
GAATCAACATCCATTGAGAAATTAGACAAGAAAGGAGATGAGGCATTGGAAGAACAGGGT
TGTTCTGTTGTTACATCTTCTACTAAGAATATAGAACCAAAATCAATTGAGAAAGCAGAC
ACTAAAGTAGCTGAAGCATCGGAGGAACAAGGGTGTTCTGTTTCTTCTTCTTCTTCTTCT
GCAGCATTTCCCTCCATTGATCGACTTCGTGAAGAGCTTTCTTGTGCTATTTGTTTGGAG
ATCTGTTTCGAACCAAGTACCACTCCTTGTGGTCACAGTTTTTGTAAAAAGTGCTTGCGA
TCTGCTGCTGATAAATGTGGAAAGAAATGTCCCAAGTGCAGGCAGCTTATCAGCAATGGT
AGATCATGCACTGTAAATACTGTACTTTGGAATACAATTCAACTGTTGTTTCCCAAAGAA
GTAGAAACAAGAAAAGCAGCTGCAGATTTGAGTAGTAGAGAAGCTAAACGTCAAAGTCCA
GTAAGAGCTGTTGCTACTCATTCTAACATCACTAGCAGCAGAACGACAAGAGTCCTGCTA
CTTAACAGTCCAGAATCTGGTCCTAGTAGTCAAGAAAGAAGGAATTCTCGCGCCATGAGA
AGACAAAGTGCCCGAGCTTCCGTAATGCCAAGCAGAAATCGAGGCATTAGCACGAGGGGG
GAGTTACCAAGCCAGGATGGGGATGCTGCATTGGCGCTAAGAATGCAGAGAGAGGAGTTC
ATGGAATCCTTCAGGACAAGAAGTTCAGCTGATGAGCAGTACAGGAGCTCTCTTGCTCTA
GCCAGAGCAAATTTGAGGGCCATGGCATCAAGAGCCATTAACATTCGTGTTAGAGGAGGC
CGTGGCTCATAA

Peptide Sequence

PEP ID

PGSC0003DMP400035134
PEP Infomation

pacid=37424393 transcript=PGSC0003DMT400052135 locus=PGSC0003DMG400020230 ID=PGSC0003DMT400052135.v4.03 annot-version=v4.03
Sequence

MVNDGDDKVEGLLSPKFRSVAAMAGWDEEALLMASLVVEDTPDRLPKQKKRSDLLHFKTP
PTNSRRKRRAQKRSPASITATVLDLDDQDTAKQESEKKEAESTSIEKLDKKGDEALEEQG
CSVVTSSTKNIEPKSIEKADTKVAEASEEQGCSVSSSSSSAAFPSIDRLREELSCAICLE
ICFEPSTTPCGHSFCKKCLRSAADKCGKKCPKCRQLISNGRSCTVNTVLWNTIQLLFPKE
VETRKAAADLSSREAKRQSPVRAVATHSNITSSRTTRVLLLNSPESGPSSQERRNSRAMR
RQSARASVMPSRNRGISTRGELPSQDGDAALALRMQREEFMESFRTRSSADEQYRSSLAL
ARANLRAMASRAINIRVRGGRGS*

Transcript Sequence

Transcript ID

PGSC0003DMT400052135
Transcript Infomation

pacid=37424393 locus=PGSC0003DMG400020230 ID=PGSC0003DMT400052135.v4.03 annot-version=v4.03
Sequence

ATGGTGAACGATGGAGATGATAAAGTTGAAGGGTTGTTGAGCCCCAAGTTCCGATCGGTG
GCTGCTATGGCTGGCTGGGATGAAGAGGCTCTTCTCATGGCCAGTCTTGTTGTCGAAGAC
ACACCCGATCGCCTTCCTAAACAAAAGAAACGTTCTGATTTGCTGCATTTCAAGACTCCC
CCAACAAATTCTAGAAGGAAAAGAAGGGCTCAGAAAAGGAGCCCTGCATCCATAACTGCA
ACTGTTCTTGATCTCGACGACCAAGACACTGCAAAGCAAGAAAGCGAGAAAAAGGAGGCG
GAATCAACATCCATTGAGAAATTAGACAAGAAAGGAGATGAGGCATTGGAAGAACAGGGT
TGTTCTGTTGTTACATCTTCTACTAAGAATATAGAACCAAAATCAATTGAGAAAGCAGAC
ACTAAAGTAGCTGAAGCATCGGAGGAACAAGGGTGTTCTGTTTCTTCTTCTTCTTCTTCT
GCAGCATTTCCCTCCATTGATCGACTTCGTGAAGAGCTTTCTTGTGCTATTTGTTTGGAG
ATCTGTTTCGAACCAAGTACCACTCCTTGTGGTCACAGTTTTTGTAAAAAGTGCTTGCGA
TCTGCTGCTGATAAATGTGGAAAGAAATGTCCCAAGTGCAGGCAGCTTATCAGCAATGGT
AGATCATGCACTGTAAATACTGTACTTTGGAATACAATTCAACTGTTGTTTCCCAAAGAA
GTAGAAACAAGAAAAGCAGCTGCAGATTTGAGTAGTAGAGAAGCTAAACGTCAAAGTCCA
GTAAGAGCTGTTGCTACTCATTCTAACATCACTAGCAGCAGAACGACAAGAGTCCTGCTA
CTTAACAGTCCAGAATCTGGTCCTAGTAGTCAAGAAAGAAGGAATTCTCGCGCCATGAGA
AGACAAAGTGCCCGAGCTTCCGTAATGCCAAGCAGAAATCGAGGCATTAGCACGAGGGGG
GAGTTACCAAGCCAGGATGGGGATGCTGCATTGGCGCTAAGAATGCAGAGAGAGGAGTTC
ATGGAATCCTTCAGGACAAGAAGTTCAGCTGATGAGCAGTACAGGAGCTCTCTTGCTCTA
GCCAGAGCAAATTTGAGGGCCATGGCATCAAGAGCCATTAACATTCGTGTTAGAGGAGGC
CGTGGCTCATAA