Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400052119
CDS Infomation

pacid=37429048 polypeptide=PGSC0003DMP400035124 locus=PGSC0003DMG401020229 ID=PGSC0003DMT400052119.v4.03 annot-version=v4.03
Sequence

ATGCCAAGCGTGGCCGTGAAATTATACAGTGTTTTCTTCAAGTTTATGTTAAAGCATCGG
TTGCAGAACCGAACCCAAATCCCCGCTGATGACGCCAATGCCGCAACTTCTTTCGGCGTT
ACGTCACGTCCTGATGAGGAATCTACTGCAGCTTCAAATCCTCTTTTCACCGACGGCGTT
GCCACCAAGGATATACATATAGATCCCACCACCTCTGTTTCTATCAGAATCTTTCTTCCA
GAGACCTCCCTTGGCTCTCCTGATTCTGATTTAAGGGCACAACCTAAATCTAGGGCTAAA
GCTTCAAGACCCGATTCTCTCACAGGATCCGATCTACGTAGAAGCAGCTATGGTGCTGCT
ACAACTGATAATGTCACCGACTATCATAATAGAAATAGTTTCAATCATAGGAGAAATAGC
TACGGAGGCAATGTGGATGATCTCGCTTTGAAATCTGAAAATGGGGTTTATAGAGGATAT
GCTCCCGCCGGTAAAAATTGCAGGAAGTTGCCGGTGATGTTACAATTCCATGGTGGGGGA
TTTGTGAGTGGGAGCAATGATTCGGTTTCAAATGATTTTTTCTGTAGAAGAATTGCAAAG
CTTTGTGATGTCATTGTTTTGGCAGTTGGATACAGGTTATCACCTGAGAATAGATACCCA
GCTGCATTTGAGGATGGGTTGAAAGCTCTGCATTGGCTGGCGAAGCAGGCCAATTTGGCT
GAATGCAGCAAGTCATTGGGCAACAGACGTGGAGGAGCAGATGTGAAAAAATCTGATTCT
CACGGACACATAGCGGATGCCTTTGGAGCATCAATGGCGGAGCCTTGGTTGGCTGCTCAT
GGAGATCCGTCGAGGTGTGTTCTCCTTGGAGTGAGTTGTGGGGGAAACATAGCTGATTAT
GTGGCCCGGAAGGCAGTAGAAGCAGGCAACCTTTTGGACCCAGTCAAGGTGGTGGCACAG
GTCTTGATGTATCCATTTTTCATTGGCAATGTTCCAACTCATTCTGAGATAAAGTTAGCT
AATTCCTATTTCTATGACAAGACGATGTGCGTACTTGCCTGGAAACTATTTTTACCTGAA
GGAGAGTTTGACTTGGATCACCCTGCTGCCAACCCACTTGTCGCTGGTAGAGGAGGACCT
CCATTAAAACGAATGCCCCCAACATTGACAATTATAGCAGAGCATGACTGGATGAAAGAT
CGGGCTATTGCTTATTCAGAGGAACTCCGGAAAGTAAATGTTGATGCTCCTGTACTTGAA
TATAAGGATGCTGTTCACGAGTTTGCAACTCTTGACATGCTTCTCAAGACCCCTCAGGCT
CAGGCTTGTGCTGAGGATATTGCCATCTGGGTAAAGAAGCACATTTCACTCCGAGGTCAT
GAGTTTTCATATTGA

Peptide Sequence

PEP ID

PGSC0003DMP400035124
PEP Infomation

pacid=37429048 transcript=PGSC0003DMT400052119 locus=PGSC0003DMG401020229 ID=PGSC0003DMT400052119.v4.03 annot-version=v4.03
Sequence

MPSVAVKLYSVFFKFMLKHRLQNRTQIPADDANAATSFGVTSRPDEESTAASNPLFTDGV
ATKDIHIDPTTSVSIRIFLPETSLGSPDSDLRAQPKSRAKASRPDSLTGSDLRRSSYGAA
TTDNVTDYHNRNSFNHRRNSYGGNVDDLALKSENGVYRGYAPAGKNCRKLPVMLQFHGGG
FVSGSNDSVSNDFFCRRIAKLCDVIVLAVGYRLSPENRYPAAFEDGLKALHWLAKQANLA
ECSKSLGNRRGGADVKKSDSHGHIADAFGASMAEPWLAAHGDPSRCVLLGVSCGGNIADY
VARKAVEAGNLLDPVKVVAQVLMYPFFIGNVPTHSEIKLANSYFYDKTMCVLAWKLFLPE
GEFDLDHPAANPLVAGRGGPPLKRMPPTLTIIAEHDWMKDRAIAYSEELRKVNVDAPVLE
YKDAVHEFATLDMLLKTPQAQACAEDIAIWVKKHISLRGHEFSY*

Transcript Sequence

Transcript ID

PGSC0003DMT400052119
Transcript Infomation

pacid=37429048 locus=PGSC0003DMG401020229 ID=PGSC0003DMT400052119.v4.03 annot-version=v4.03
Sequence

ATGCCAAGCGTGGCCGTGAAATTATACAGTGTTTTCTTCAAGTTTATGTTAAAGCATCGG
TTGCAGAACCGAACCCAAATCCCCGCTGATGACGCCAATGCCGCAACTTCTTTCGGCGTT
ACGTCACGTCCTGATGAGGAATCTACTGCAGCTTCAAATCCTCTTTTCACCGACGGCGTT
GCCACCAAGGATATACATATAGATCCCACCACCTCTGTTTCTATCAGAATCTTTCTTCCA
GAGACCTCCCTTGGCTCTCCTGATTCTGATTTAAGGGCACAACCTAAATCTAGGGCTAAA
GCTTCAAGACCCGATTCTCTCACAGGATCCGATCTACGTAGAAGCAGCTATGGTGCTGCT
ACAACTGATAATGTCACCGACTATCATAATAGAAATAGTTTCAATCATAGGAGAAATAGC
TACGGAGGCAATGTGGATGATCTCGCTTTGAAATCTGAAAATGGGGTTTATAGAGGATAT
GCTCCCGCCGGTAAAAATTGCAGGAAGTTGCCGGTGATGTTACAATTCCATGGTGGGGGA
TTTGTGAGTGGGAGCAATGATTCGGTTTCAAATGATTTTTTCTGTAGAAGAATTGCAAAG
CTTTGTGATGTCATTGTTTTGGCAGTTGGATACAGGTTATCACCTGAGAATAGATACCCA
GCTGCATTTGAGGATGGGTTGAAAGCTCTGCATTGGCTGGCGAAGCAGGCCAATTTGGCT
GAATGCAGCAAGTCATTGGGCAACAGACGTGGAGGAGCAGATGTGAAAAAATCTGATTCT
CACGGACACATAGCGGATGCCTTTGGAGCATCAATGGCGGAGCCTTGGTTGGCTGCTCAT
GGAGATCCGTCGAGGTGTGTTCTCCTTGGAGTGAGTTGTGGGGGAAACATAGCTGATTAT
GTGGCCCGGAAGGCAGTAGAAGCAGGCAACCTTTTGGACCCAGTCAAGGTGGTGGCACAG
GTCTTGATGTATCCATTTTTCATTGGCAATGTTCCAACTCATTCTGAGATAAAGTTAGCT
AATTCCTATTTCTATGACAAGACGATGTGCGTACTTGCCTGGAAACTATTTTTACCTGAA
GGAGAGTTTGACTTGGATCACCCTGCTGCCAACCCACTTGTCGCTGGTAGAGGAGGACCT
CCATTAAAACGAATGCCCCCAACATTGACAATTATAGCAGAGCATGACTGGATGAAAGAT
CGGGCTATTGCTTATTCAGAGGAACTCCGGAAAGTAAATGTTGATGCTCCTGTACTTGAA
TATAAGGATGCTGTTCACGAGTTTGCAACTCTTGACATGCTTCTCAAGACCCCTCAGGCT
CAGGCTTGTGCTGAGGATATTGCCATCTGGGTAAAGAAGCACATTTCACTCCGAGGTCAT
GAGTTTTCATATTGA