Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400052116
CDS Infomation

pacid=37428556 polypeptide=PGSC0003DMP400035122 locus=PGSC0003DMG400020228 ID=PGSC0003DMT400052116.v4.03 annot-version=v4.03
Sequence

ATGATCAAACAAATACTCAATAGGCTCCCTAGAAAGCCTTCCAAGTCAGCAGAAAATCGT
GATGGAGGAAGCTCTGCATCACCGTCAAATGCTTCAACTAGTTCTAGAAGCAGTGATTTG
TCTACTGCGCAGTCAGGAAATTCAAGTGCCACTACTGTTTCAGGAGTCACTTCTTCGACT
CTGGGACCGAATCATGGAAATAGGCTACCGCAGGCGGCAAATGCTAAGGTGAATGGAAGT
GCAGTGTGTGAGACCTTGCCTAGTTTTAAAGATGTACCAACTGCTGAGAAGCAAACATTG
TTCATAAAAAAACTGAACTTGTGCTGTGTATTATTTGACTTTACTGACCCAACAAAACAC
TTGAAAGAAAAAGACATCAAGCGGCAGACATTAGTGGAGCTTGTTGATTATATTAGTTCT
GTGAATGTAAAATTCACAGAAACTGTCATTCAAGAAATAGTTAAAATGGTATCTTCAAAT
CTGTTCAGGCCTCTTACTTCTCAACCTCGTGAAAACAAAGTATTGGAAGCTTTTGACTTA
GAAGATGACGAACCCTTGATGGATCCTGCATGGTCACATCTGCAAATTGTGTATGAGTTC
TTTCTCAGATTTGTGGCATCGCCGGAGACAGATGCAAAATTGTCTAAGCGATACGTTGAT
CACTCTTTTGTTCTAAGGTTATTAGATCTTTTTGATTCAGAAGATCCAAGAGAAAGGGAG
TTCTTGAAGACGGTTCTGCACCGCATATATGGAAAATTCATGGTGCACCGCCCTTTTATT
AGGAAATCAATCAACAATATATTTTACCGGTTTATCTTTGAAACTGAGAAGCATAATGGA
ATAGCAGAACTTTTAGAAATTTTGGGCAGTATAATCAATGGATTTGCACTTCCACTGAAG
GAAGAGCACAAGTTGTTCCTTGTTCGAGCTCTTATTCCACTTCATAAACCAAAGTGCGTA
CACATGTATCATCAGCAGTTATCTTACTGCATAACACAATTTGTGGAGAAGGACTGCAAG
CTCGCTGATACTGTCATAAGAGGTTTGTTGAAATATTGGCCTATCACAAACAGTTCCAAG
GAAGTAGTGTTCTTAGGTGAGCTGGAGGAGGTTCTAGAAGCAACTCAGCCTCCAGAATTC
CAGCGTTGTATGGTGCCTTTGTTTCATCAGATCAGTCGTTGTTTGAGCAGCTCGCACTTT
CAGGTGGCTGAGAGGGCCTTGTTCCTATGGAACAATAATCATGTTGAGAACCTAATCAAA
CAAAATCGTAAAGTTATACTGCCGATAATCTTCCCTGCCTTGGAGAAGAATGCTAGAGGC
CACTGGAATCAGGCGGTGCAAAACTTGACATTAAATGTCCGCAAGATCTTCTCTGATATC
GATTCTGAACTCTTTGAAGAGTGTTTGCAGAAATTCGAAGAAGACAAGGCCCAAGAAGAG
GAGGTAAAGAGGAAACGTGAAATTACTTGGAAACGGTTAGAGGAGCTTGCTGGAATGAAA
GCTGCAAGCAATGAGCCAGTGCTAGTTTCTCATAAGACAACGCCTCATTCACCATCTGGC
TAG

Peptide Sequence

PEP ID

PGSC0003DMP400035122
PEP Infomation

pacid=37428556 transcript=PGSC0003DMT400052116 locus=PGSC0003DMG400020228 ID=PGSC0003DMT400052116.v4.03 annot-version=v4.03
Sequence

MIKQILNRLPRKPSKSAENRDGGSSASPSNASTSSRSSDLSTAQSGNSSATTVSGVTSST
LGPNHGNRLPQAANAKVNGSAVCETLPSFKDVPTAEKQTLFIKKLNLCCVLFDFTDPTKH
LKEKDIKRQTLVELVDYISSVNVKFTETVIQEIVKMVSSNLFRPLTSQPRENKVLEAFDL
EDDEPLMDPAWSHLQIVYEFFLRFVASPETDAKLSKRYVDHSFVLRLLDLFDSEDPRERE
FLKTVLHRIYGKFMVHRPFIRKSINNIFYRFIFETEKHNGIAELLEILGSIINGFALPLK
EEHKLFLVRALIPLHKPKCVHMYHQQLSYCITQFVEKDCKLADTVIRGLLKYWPITNSSK
EVVFLGELEEVLEATQPPEFQRCMVPLFHQISRCLSSSHFQVAERALFLWNNNHVENLIK
QNRKVILPIIFPALEKNARGHWNQAVQNLTLNVRKIFSDIDSELFEECLQKFEEDKAQEE
EVKRKREITWKRLEELAGMKAASNEPVLVSHKTTPHSPSG*

Transcript Sequence

Transcript ID

PGSC0003DMT400052116
Transcript Infomation

pacid=37428556 locus=PGSC0003DMG400020228 ID=PGSC0003DMT400052116.v4.03 annot-version=v4.03
Sequence

ATGATCAAACAAATACTCAATAGGCTCCCTAGAAAGCCTTCCAAGTCAGCAGAAAATCGT
GATGGAGGAAGCTCTGCATCACCGTCAAATGCTTCAACTAGTTCTAGAAGCAGTGATTTG
TCTACTGCGCAGTCAGGAAATTCAAGTGCCACTACTGTTTCAGGAGTCACTTCTTCGACT
CTGGGACCGAATCATGGAAATAGGCTACCGCAGGCGGCAAATGCTAAGGTGAATGGAAGT
GCAGTGTGTGAGACCTTGCCTAGTTTTAAAGATGTACCAACTGCTGAGAAGCAAACATTG
TTCATAAAAAAACTGAACTTGTGCTGTGTATTATTTGACTTTACTGACCCAACAAAACAC
TTGAAAGAAAAAGACATCAAGCGGCAGACATTAGTGGAGCTTGTTGATTATATTAGTTCT
GTGAATGTAAAATTCACAGAAACTGTCATTCAAGAAATAGTTAAAATGGTATCTTCAAAT
CTGTTCAGGCCTCTTACTTCTCAACCTCGTGAAAACAAAGTATTGGAAGCTTTTGACTTA
GAAGATGACGAACCCTTGATGGATCCTGCATGGTCACATCTGCAAATTGTGTATGAGTTC
TTTCTCAGATTTGTGGCATCGCCGGAGACAGATGCAAAATTGTCTAAGCGATACGTTGAT
CACTCTTTTGTTCTAAGGTTATTAGATCTTTTTGATTCAGAAGATCCAAGAGAAAGGGAG
TTCTTGAAGACGGTTCTGCACCGCATATATGGAAAATTCATGGTGCACCGCCCTTTTATT
AGGAAATCAATCAACAATATATTTTACCGGTTTATCTTTGAAACTGAGAAGCATAATGGA
ATAGCAGAACTTTTAGAAATTTTGGGCAGTATAATCAATGGATTTGCACTTCCACTGAAG
GAAGAGCACAAGTTGTTCCTTGTTCGAGCTCTTATTCCACTTCATAAACCAAAGTGCGTA
CACATGTATCATCAGCAGTTATCTTACTGCATAACACAATTTGTGGAGAAGGACTGCAAG
CTCGCTGATACTGTCATAAGAGGTTTGTTGAAATATTGGCCTATCACAAACAGTTCCAAG
GAAGTAGTGTTCTTAGGTGAGCTGGAGGAGGTTCTAGAAGCAACTCAGCCTCCAGAATTC
CAGCGTTGTATGGTGCCTTTGTTTCATCAGATCAGTCGTTGTTTGAGCAGCTCGCACTTT
CAGGTGGCTGAGAGGGCCTTGTTCCTATGGAACAATAATCATGTTGAGAACCTAATCAAA
CAAAATCGTAAAGTTATACTGCCGATAATCTTCCCTGCCTTGGAGAAGAATGCTAGAGGC
CACTGGAATCAGGCGGTGCAAAACTTGACATTAAATGTCCGCAAGATCTTCTCTGATATC
GATTCTGAACTCTTTGAAGAGTGTTTGCAGAAATTCGAAGAAGACAAGGCCCAAGAAGAG
GAGGTAAAGAGGAAACGTGAAATTACTTGGAAACGGTTAGAGGAGCTTGCTGGAATGAAA
GCTGCAAGCAATGAGCCAGTGCTAGTTTCTCATAAGACAACGCCTCATTCACCATCTGGC
TAG