Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400052108
CDS Infomation

pacid=37427029 polypeptide=PGSC0003DMP400035118 locus=PGSC0003DMG400020226 ID=PGSC0003DMT400052108.v4.03 annot-version=v4.03
Sequence

ATGGCTAGGAAAGACAAGTTGCGTGGAGGTGGTTCTGCTGGTTTTGCCACTAATTGTGGA
TCGGAGGGCTCTGGCAGTTCAGGGAGATTCGATGCTGGAATTTCCGTTTCAGGACATTCA
ATTGCTCCTCAGCAGAGATGGATAAATATAAATTCTTCTTCACATGATGGTTTTGCTGTG
CCCATCCATGTTATACTGCAATCCAAGCTGTCACCATCTGAGAGGAAAAACTTGGTTCTG
CAGTTGAGATCTGATATTGAACAAATTAGACTTCTTCAGAAGAAAGTTGAGTTTTATAGG
ACAAGTGTAATTGCAGTTTCATCTTCTAGTGATATTGTTAGCTGTAGCAATGCACAGAAA
GGGCTCCCTTTAGCAAGCAAGAAGAAATCTACAGGAAACCCTGGGTTTGGAAAGAAGTCA
AACCCTCTTGCTCAGAAGACACGGGGCCTGAGCAGGGAGGTGTCAGGCAGGTTTAAATCT
GTTAAGCCTACTTCAGTACCATCCCGTTCAAATGCAGCATTGATGAAACAGTGTGAGAAC
TTGTTGAAAAAGTTGTTGTCACATCATAATGCTGGTGTATTTAATAAACCTGTTGACGTA
GTTAAGTTGAATATTCCCGACTATTTCACTGTCATTAAACACCCAATGGATTTGGGGACA
ATAAAAAAGAGGCTGACTTCAGGTGCTTACTCGAGTCCACTGGAGTTTCTTGCTGATGTG
AGACTGACGTTTTCTAATGCATTGACCTACAACCCCCCTGGTAATATTGTCAATGTCATG
GCTGACGAGATGAGCAAATTTTTTGAACTGAGATGGAAAACTATTGAGAAAAAGCTGCCT
ACAAACGATGCTGAATTAGTGGAAGAAAAATCAGGCTTGCATGAAGAAAATGGAACTGCT
TCAAAGAAGAGGAGACTTTCTCCAACGCAGCATGTAGTTATGCCAGAACTTCCTAAATCC
AAGATGACTGATGAAGAGAAACATAAACTTGGTGGTGAACTAGAAGCTTCACTTGGTGAT
CTACCCGACAACATCCTTGAGTTTTTGAAGGAACTGAGTTCAAATGGAACAGCAACTGGA
GAAAATGGAGAAGATGGAGAAGATGCCATTGAGATTGACATTGATATTCTCTCTGATGAT
ACTTTGTTCACGTTACGGGCGCTTCTAGATAAGTTTTTGCAAGAGAAGCAAAAAGGCAAT
GCAAGAGCTGAACCTTGTGAGATAGAGCTGCCAAATGGATTGGGGCTTAGTAATTCATCC
ATGCACCTAGAAGGAGATAATAACCATGTTGATGAGGAGGTCGATATTGGTGGAAATGAG
CCTCCTGTCTCCAGTTATCCTTCACTTGAGATCGAAAAAGATACAGATCCCAAAAGAGAT
GAACGTATAAATACAGGGGGTCCCAATGATTCAGATTCTAGTAGCTCTTCTGATGATGAG
TCTGAAACTCAAAGAACACCTGATCATGCTGAGCAGGATCACAGTTCACCAGTAAAGGCA
GATGGAAAGGAAGCTGGCAATAGTTTAGCTGAAGGAAATCACTCTATCAGCGGCGTGGAC
CAGCTGGATCAAAGTTCTCAGCAAATGCCATTCTCTGTTGAGTCAGAAGCATATCAAGAT
GGGGAGAGTAGGGTCTCCCCTGGAAAGCTCTATAGGGCTGCTCTCCTGAAGAACAGATTT
GCGGATACAATTTTAAAAGCTCGAGAGAAGACACTTGTTGAGGTCGAGAAGGGCGATCCG
GAGAAACTTCGTCGTGAAAGGGAGGAGCTTGAGATGCAAAGGAGGAAAGCGAAAGCTAAG
CTGCAAGCAGAAGCTAAAGCTGCTGAAGAAGCTCAAAGACGTGCAGAAGTGGAAGCTGCA
GCGGAGGCTAAGAGGAGGAGAGAGGTCGATAGAGAAGCAGCAAGACAGGCGTTACTCCAG
ATGGAAAAGACCGTAGAGATTAATGAGAATTCAAAGTTCCTTGAGGATTTGGAGATGCTG
ACTGCTGTCCCTTCCGAGCAGTTACACAGCTCGGTAGACGAGACCAGTCCAGATCATTCC
CAGGATGGATTAGGTAGCTTCAAATTTGGAGGCAGTAATCCCTTGGAGCAACTTGGGTTG
TACATGAAGGTGGATGATGATGAGGAAGAATGTGAACTGGCTACTCTCCCAAGTGATCCT
ATTGATGTTGAGGAAGGTGAAATTGATTAA

Peptide Sequence

PEP ID

PGSC0003DMP400035118
PEP Infomation

pacid=37427029 transcript=PGSC0003DMT400052108 locus=PGSC0003DMG400020226 ID=PGSC0003DMT400052108.v4.03 annot-version=v4.03
Sequence

MARKDKLRGGGSAGFATNCGSEGSGSSGRFDAGISVSGHSIAPQQRWININSSSHDGFAV
PIHVILQSKLSPSERKNLVLQLRSDIEQIRLLQKKVEFYRTSVIAVSSSSDIVSCSNAQK
GLPLASKKKSTGNPGFGKKSNPLAQKTRGLSREVSGRFKSVKPTSVPSRSNAALMKQCEN
LLKKLLSHHNAGVFNKPVDVVKLNIPDYFTVIKHPMDLGTIKKRLTSGAYSSPLEFLADV
RLTFSNALTYNPPGNIVNVMADEMSKFFELRWKTIEKKLPTNDAELVEEKSGLHEENGTA
SKKRRLSPTQHVVMPELPKSKMTDEEKHKLGGELEASLGDLPDNILEFLKELSSNGTATG
ENGEDGEDAIEIDIDILSDDTLFTLRALLDKFLQEKQKGNARAEPCEIELPNGLGLSNSS
MHLEGDNNHVDEEVDIGGNEPPVSSYPSLEIEKDTDPKRDERINTGGPNDSDSSSSSDDE
SETQRTPDHAEQDHSSPVKADGKEAGNSLAEGNHSISGVDQLDQSSQQMPFSVESEAYQD
GESRVSPGKLYRAALLKNRFADTILKAREKTLVEVEKGDPEKLRREREELEMQRRKAKAK
LQAEAKAAEEAQRRAEVEAAAEAKRRREVDREAARQALLQMEKTVEINENSKFLEDLEML
TAVPSEQLHSSVDETSPDHSQDGLGSFKFGGSNPLEQLGLYMKVDDDEEECELATLPSDP
IDVEEGEID*

Transcript Sequence

Transcript ID

PGSC0003DMT400052108
Transcript Infomation

pacid=37427029 locus=PGSC0003DMG400020226 ID=PGSC0003DMT400052108.v4.03 annot-version=v4.03
Sequence

ATGGCTAGGAAAGACAAGTTGCGTGGAGGTGGTTCTGCTGGTTTTGCCACTAATTGTGGA
TCGGAGGGCTCTGGCAGTTCAGGGAGATTCGATGCTGGAATTTCCGTTTCAGGACATTCA
ATTGCTCCTCAGCAGAGATGGATAAATATAAATTCTTCTTCACATGATGGTTTTGCTGTG
CCCATCCATGTTATACTGCAATCCAAGCTGTCACCATCTGAGAGGAAAAACTTGGTTCTG
CAGTTGAGATCTGATATTGAACAAATTAGACTTCTTCAGAAGAAAGTTGAGTTTTATAGG
ACAAGTGTAATTGCAGTTTCATCTTCTAGTGATATTGTTAGCTGTAGCAATGCACAGAAA
GGGCTCCCTTTAGCAAGCAAGAAGAAATCTACAGGAAACCCTGGGTTTGGAAAGAAGTCA
AACCCTCTTGCTCAGAAGACACGGGGCCTGAGCAGGGAGGTGTCAGGCAGGTTTAAATCT
GTTAAGCCTACTTCAGTACCATCCCGTTCAAATGCAGCATTGATGAAACAGTGTGAGAAC
TTGTTGAAAAAGTTGTTGTCACATCATAATGCTGGTGTATTTAATAAACCTGTTGACGTA
GTTAAGTTGAATATTCCCGACTATTTCACTGTCATTAAACACCCAATGGATTTGGGGACA
ATAAAAAAGAGGCTGACTTCAGGTGCTTACTCGAGTCCACTGGAGTTTCTTGCTGATGTG
AGACTGACGTTTTCTAATGCATTGACCTACAACCCCCCTGGTAATATTGTCAATGTCATG
GCTGACGAGATGAGCAAATTTTTTGAACTGAGATGGAAAACTATTGAGAAAAAGCTGCCT
ACAAACGATGCTGAATTAGTGGAAGAAAAATCAGGCTTGCATGAAGAAAATGGAACTGCT
TCAAAGAAGAGGAGACTTTCTCCAACGCAGCATGTAGTTATGCCAGAACTTCCTAAATCC
AAGATGACTGATGAAGAGAAACATAAACTTGGTGGTGAACTAGAAGCTTCACTTGGTGAT
CTACCCGACAACATCCTTGAGTTTTTGAAGGAACTGAGTTCAAATGGAACAGCAACTGGA
GAAAATGGAGAAGATGGAGAAGATGCCATTGAGATTGACATTGATATTCTCTCTGATGAT
ACTTTGTTCACGTTACGGGCGCTTCTAGATAAGTTTTTGCAAGAGAAGCAAAAAGGCAAT
GCAAGAGCTGAACCTTGTGAGATAGAGCTGCCAAATGGATTGGGGCTTAGTAATTCATCC
ATGCACCTAGAAGGAGATAATAACCATGTTGATGAGGAGGTCGATATTGGTGGAAATGAG
CCTCCTGTCTCCAGTTATCCTTCACTTGAGATCGAAAAAGATACAGATCCCAAAAGAGAT
GAACGTATAAATACAGGGGGTCCCAATGATTCAGATTCTAGTAGCTCTTCTGATGATGAG
TCTGAAACTCAAAGAACACCTGATCATGCTGAGCAGGATCACAGTTCACCAGTAAAGGCA
GATGGAAAGGAAGCTGGCAATAGTTTAGCTGAAGGAAATCACTCTATCAGCGGCGTGGAC
CAGCTGGATCAAAGTTCTCAGCAAATGCCATTCTCTGTTGAGTCAGAAGCATATCAAGAT
GGGGAGAGTAGGGTCTCCCCTGGAAAGCTCTATAGGGCTGCTCTCCTGAAGAACAGATTT
GCGGATACAATTTTAAAAGCTCGAGAGAAGACACTTGTTGAGGTCGAGAAGGGCGATCCG
GAGAAACTTCGTCGTGAAAGGGAGGAGCTTGAGATGCAAAGGAGGAAAGCGAAAGCTAAG
CTGCAAGCAGAAGCTAAAGCTGCTGAAGAAGCTCAAAGACGTGCAGAAGTGGAAGCTGCA
GCGGAGGCTAAGAGGAGGAGAGAGGTCGATAGAGAAGCAGCAAGACAGGCGTTACTCCAG
ATGGAAAAGACCGTAGAGATTAATGAGAATTCAAAGTTCCTTGAGGATTTGGAGATGCTG
ACTGCTGTCCCTTCCGAGCAGTTACACAGCTCGGTAGACGAGACCAGTCCAGATCATTCC
CAGGATGGATTAGGTAGCTTCAAATTTGGAGGCAGTAATCCCTTGGAGCAACTTGGGTTG
TACATGAAGGTGGATGATGATGAGGAAGAATGTGAACTGGCTACTCTCCCAAGTGATCCT
ATTGATGTTGAGGAAGGTGAAATTGATTAA