Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400052092
CDS Infomation

pacid=37427653 polypeptide=PGSC0003DMP400035106 locus=PGSC0003DMG400020220 ID=PGSC0003DMT400052092.v4.03 annot-version=v4.03
Sequence

ATGATATCTTTTATGCAACTACGAATCCCAAACGCAAAGCTTGCCTTTCTTTCAAGAACA
TCCCGAGTACCCCTTTATCGGATTGTATTGTCGTTTCCTCAGAAGGTTTTCTTTTGCGCA
GCGAAGTATTCTGAATCTGAGGTAGACGGATCTTTTAGCTTAAGGTTGGTCCCCCCAACC
CTTGTAGCTGCTGAAAAGGAAGAGGCGAAGGCTGTCTTGACCTTGTTTCTGAAGAAACAG
GGTTTAAGCAATGCTCTTGCAGCAAGAGCTATCAACAGATCAGAGTCTTTTATCGATCAC
CTTGTCTCTCGGCTGCATTCTGTTCATAAGTCTCGCTACCTCGTAGGACGAGAACTAACA
ACTCTTGAGATTAGGGATGCTCTCATCCCATACCTTGAGGCCCTCCACGAGGAATATGGA
AGCATTTTGGTGGACGTTGTGGAGAGCTTTCCAAACCCACCTGTTGTGGAGAAAATAGAA
GAAACTGTTGAAAAAGTACCTATTCCTGTCACACCAGCTTCACCTCCTAGTGCTGTTCTC
GACTCCAAGAAACTGAAGGCTCTGGCACGAGTGACTGATAATGGACCCACTGGAAAGCTC
CCCCCACATATTTTATACCTTGTTGAACTGGGCATGGACATTGAAAGGATTAGAGTTATC
ACACGAAAGTTTCCTGCTTTTGCCTACTATAGTCTTGAGGGAAAAATCAAACCAGTAGTT
GAGTTTCTCCTTGATCTTGGAGTGCCAAGATCTCAGATCCCAACAATTCTCAGCAAAAGG
CCTCAACTATGTGGAATTAGTCTCTCAGATAATTTAATTCCAACAATGACATTTTTGGAA
GAACTGGGCGTTGATAAAGAACAATGGGCTAAAGTGATCTACCGTTTTCCTGCACTTCTC
ACTTACAGTAGACCTAAATTGAGAGCAACAGTGGACTTTCTTTATGAAATGGGTCTATCT
GCTGAGTGTGTGAGCAAGGTTCTAACCAGATGTCCAAACATCATAAGTTACAGTGTAGAG
GACAAGCTAAGGCCTGCAACTGAGTACTTCCGCTCAATGGGGGTTGATGTTGGAGTTCTT
CTCTACCGATGTCCTCAAACCTTTGGTCTTAGCATTGAGGCTAACATTAAGCCTGCCACC
GAGTTCTTCAAGGATAAGGGGTTCAGTATGACGGAAATTGCCACAATGGTGTCAAGATAT
GGTGCTCTATATACTTTTAGCTTGGCTAAGTTGGTATTAAAGTGGGAGTTCTTTTTGACC
ATGGGTTATCCAAGAACAGAACTGGTCAAGTTTCCTCAGTATTTTGGTTATAGTTTAGAA
GAGAGAATCAAGCCAAGGTTTGGCATTATGACTGATAAAGGTGTAAGGTTGTTATTGAAC
CAGATGTTGTCACTGTCAGAAGATGGTTTCAATAAGGCTTTGAAGAGAAAATTGCAGAAA
CTAATAGATAATTAG

Peptide Sequence

PEP ID

PGSC0003DMP400035106
PEP Infomation

pacid=37427653 transcript=PGSC0003DMT400052092 locus=PGSC0003DMG400020220 ID=PGSC0003DMT400052092.v4.03 annot-version=v4.03
Sequence

MISFMQLRIPNAKLAFLSRTSRVPLYRIVLSFPQKVFFCAAKYSESEVDGSFSLRLVPPT
LVAAEKEEAKAVLTLFLKKQGLSNALAARAINRSESFIDHLVSRLHSVHKSRYLVGRELT
TLEIRDALIPYLEALHEEYGSILVDVVESFPNPPVVEKIEETVEKVPIPVTPASPPSAVL
DSKKLKALARVTDNGPTGKLPPHILYLVELGMDIERIRVITRKFPAFAYYSLEGKIKPVV
EFLLDLGVPRSQIPTILSKRPQLCGISLSDNLIPTMTFLEELGVDKEQWAKVIYRFPALL
TYSRPKLRATVDFLYEMGLSAECVSKVLTRCPNIISYSVEDKLRPATEYFRSMGVDVGVL
LYRCPQTFGLSIEANIKPATEFFKDKGFSMTEIATMVSRYGALYTFSLAKLVLKWEFFLT
MGYPRTELVKFPQYFGYSLEERIKPRFGIMTDKGVRLLLNQMLSLSEDGFNKALKRKLQK
LIDN*

Transcript Sequence

Transcript ID

PGSC0003DMT400052092
Transcript Infomation

pacid=37427653 locus=PGSC0003DMG400020220 ID=PGSC0003DMT400052092.v4.03 annot-version=v4.03
Sequence

ATGATATCTTTTATGCAACTACGAATCCCAAACGCAAAGCTTGCCTTTCTTTCAAGAACA
TCCCGAGTACCCCTTTATCGGATTGTATTGTCGTTTCCTCAGAAGGTTTTCTTTTGCGCA
GCGAAGTATTCTGAATCTGAGGTAGACGGATCTTTTAGCTTAAGGTTGGTCCCCCCAACC
CTTGTAGCTGCTGAAAAGGAAGAGGCGAAGGCTGTCTTGACCTTGTTTCTGAAGAAACAG
GGTTTAAGCAATGCTCTTGCAGCAAGAGCTATCAACAGATCAGAGTCTTTTATCGATCAC
CTTGTCTCTCGGCTGCATTCTGTTCATAAGTCTCGCTACCTCGTAGGACGAGAACTAACA
ACTCTTGAGATTAGGGATGCTCTCATCCCATACCTTGAGGCCCTCCACGAGGAATATGGA
AGCATTTTGGTGGACGTTGTGGAGAGCTTTCCAAACCCACCTGTTGTGGAGAAAATAGAA
GAAACTGTTGAAAAAGTACCTATTCCTGTCACACCAGCTTCACCTCCTAGTGCTGTTCTC
GACTCCAAGAAACTGAAGGCTCTGGCACGAGTGACTGATAATGGACCCACTGGAAAGCTC
CCCCCACATATTTTATACCTTGTTGAACTGGGCATGGACATTGAAAGGATTAGAGTTATC
ACACGAAAGTTTCCTGCTTTTGCCTACTATAGTCTTGAGGGAAAAATCAAACCAGTAGTT
GAGTTTCTCCTTGATCTTGGAGTGCCAAGATCTCAGATCCCAACAATTCTCAGCAAAAGG
CCTCAACTATGTGGAATTAGTCTCTCAGATAATTTAATTCCAACAATGACATTTTTGGAA
GAACTGGGCGTTGATAAAGAACAATGGGCTAAAGTGATCTACCGTTTTCCTGCACTTCTC
ACTTACAGTAGACCTAAATTGAGAGCAACAGTGGACTTTCTTTATGAAATGGGTCTATCT
GCTGAGTGTGTGAGCAAGGTTCTAACCAGATGTCCAAACATCATAAGTTACAGTGTAGAG
GACAAGCTAAGGCCTGCAACTGAGTACTTCCGCTCAATGGGGGTTGATGTTGGAGTTCTT
CTCTACCGATGTCCTCAAACCTTTGGTCTTAGCATTGAGGCTAACATTAAGCCTGCCACC
GAGTTCTTCAAGGATAAGGGGTTCAGTATGACGGAAATTGCCACAATGGTGTCAAGATAT
GGTGCTCTATATACTTTTAGCTTGGCTAAGTTGGTATTAAAGTGGGAGTTCTTTTTGACC
ATGGGTTATCCAAGAACAGAACTGGTCAAGTTTCCTCAGTATTTTGGTTATAGTTTAGAA
GAGAGAATCAAGCCAAGGTTTGGCATTATGACTGATAAAGGTGTAAGGTTGTTATTGAAC
CAGATGTTGTCACTGTCAGAAGATGGTTTCAATAAGGCTTTGAAGAGAAAATTGCAGAAA
CTAATAGATAATTAG