Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400052075
CDS Infomation

pacid=37428121 polypeptide=PGSC0003DMP400035096 locus=PGSC0003DMG400020216 ID=PGSC0003DMT400052075.v4.03 annot-version=v4.03
Sequence

ATGATAGTCGCTTTTCAATTCTGGGCTTTCCTATTTTTCTTACTATTTGTTACTCTTTCT
GTTCTTGGAGAGGACTTGTTAAGCTGCGAGTCCAAATCTCCATCTGCTTCTGGCTATCGA
TGTGACCATAACGTGCATCCTATACAATGCGGGACATTTGCAATTCTTCGTACTAATTCA
TTTTACGACTCTCTTTTCAATCTGAGCTCTTATTTAGGTATCAATCGATACGTTCTCGGA
GAAGCAAATGGATTTTCTCCTGATATAGAGTTTCTTGCAATTGATCAGCCTTTAATAATT
CCATTAGATTGTAAATGCATTGGTGGTTTCTTTGAATCAGCGCTAACGAAAACCACCATT
AAAGGTGAGAGCTTTTACAGCATTGCTCAATCTTTGGAAGGTTTAACGACTTGTAAAAAA
ATTCAGGAGAAAAATCCAAATGTTACCCCTTGGGGTCTCTCTGAGAAAATTCTGTTGTCG
ATTCCATTGAGATGTGCTTGTCCTTCTCCAGAAGAAATTAGTCTGCGGACGAAACTTCTG
CTCTCATATCCAGTGAAGCAAGGCGATACGATTGCAGCCTTAGCAATCAGCTTCAATACG
ACTGCTGAAAGAATAATTGATGTCAATCGAAGATCACAAGGAGGCAGTTTTAGACCTGAA
GGACTTTCACCACCTTCAACACTTTTGATCCCTCTCGAAGGTAAACCCAAACTTGAATCA
TTCACGAAACCTCAGCAGCCGAATTTGGGATATCCAGCAGCAAGTATCGCGTCATCTAAA
ATACATAAAAAGAAGACCAAAATTCGGATGATGAGAGTTTATATTGCTGTTGCTGTGGTT
GCTTTCGTGGCAATTGTTGCGCTCGCAGCAGTTTTCTTGTTTTGTTTTCTCAAGAGGAAA
AGGAATAATTTGAGTAAGGAAGGAGATACGGAGCTACAAAAGTTAAGTTTGAGTGTGAGA
ACTACTAGTGAAAAGAAAGTTTCATTCGACGGGTCTCAAAATGATCTTGATGGTCAGATT
ATTGATGCCACACCACATAAGCTATTGGTTGAGACCTATACTATTGAAGAGATAAAGAAA
GCAACAGAGGAATTTGATTCCTCGAATCTTATCGAGGATTCTGTATTCCATGGCCGGATC
AGTGGTAAAAATTTGGCAATCAAACAGATGGAGACTAGCAGTATCTCAAAAATAGATTTC
GGGCTATTCAACGATGCAATTCATCATCACCCAAATATCATTAGGCTCTTAGGGACGTGT
GTTACAGAGGGTCCTGATTCATTCTTGGTGTTTGAATACGCGAAAAATGGTTCATTGAAG
GACTGGCTTCATGGTGGTCTAGCAATGAAAAATCAATTCATTGCTTCATGTGATTGTTTC
TTGACATGGAATCAGAGGCTAAGGATCTGTTTAGATGTAGCCACTGCCTTGCAATTTATG
CACCATATCATGGATCCTGTTTATGTTCATGGTAATATAAAGAGCCGGAACATATTTCTT
GATGAAGAGTTCAAGGCTAAAGTTGGTAATTTTGGTATGGCTCGATGTGTTGAAGATGAT
GTTGCAAAAGGTTACCTGGCGCCAGAGTGCCTTAAACAAGAAATCATAACCCCGAGCATT
GATATCTTTGCTTTCGGGGTGATATTACTTGAGGTGTTATCAGGCCAAACACCTATAAGA
AGTGGCAATGGTACTGAAGGAGAAGATGAAGTTGCCCTCTCTGAGAAAATAAAGGTTATT
TTGGAGTCAGAGAATGCTGATGAGCTAAGGGAATGGGTAGACAGCGCGTTGGGAGAGAAT
TATTCATTTGATGCAGCAGTGACATTGGCAAATTTGGCTAGAGCATGTGTGGAGGAAGAG
CCGTCATTAAGACCAAATGCTGGTGAAATTGTGGAGAAGTTGTCAAGATTGGTTGAAGAA
ATATTACTGGAAAGGGAGGAGCAACTCATAATCTCCGAAAGCTCTTGCAAACCTTTGTTC
AAGGCTGATGCCACCAGTACTACCATGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400035096
PEP Infomation

pacid=37428121 transcript=PGSC0003DMT400052075 locus=PGSC0003DMG400020216 ID=PGSC0003DMT400052075.v4.03 annot-version=v4.03
Sequence

MIVAFQFWAFLFFLLFVTLSVLGEDLLSCESKSPSASGYRCDHNVHPIQCGTFAILRTNS
FYDSLFNLSSYLGINRYVLGEANGFSPDIEFLAIDQPLIIPLDCKCIGGFFESALTKTTI
KGESFYSIAQSLEGLTTCKKIQEKNPNVTPWGLSEKILLSIPLRCACPSPEEISLRTKLL
LSYPVKQGDTIAALAISFNTTAERIIDVNRRSQGGSFRPEGLSPPSTLLIPLEGKPKLES
FTKPQQPNLGYPAASIASSKIHKKKTKIRMMRVYIAVAVVAFVAIVALAAVFLFCFLKRK
RNNLSKEGDTELQKLSLSVRTTSEKKVSFDGSQNDLDGQIIDATPHKLLVETYTIEEIKK
ATEEFDSSNLIEDSVFHGRISGKNLAIKQMETSSISKIDFGLFNDAIHHHPNIIRLLGTC
VTEGPDSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCDCFLTWNQRLRICLDVATALQFM
HHIMDPVYVHGNIKSRNIFLDEEFKAKVGNFGMARCVEDDVAKGYLAPECLKQEIITPSI
DIFAFGVILLEVLSGQTPIRSGNGTEGEDEVALSEKIKVILESENADELREWVDSALGEN
YSFDAAVTLANLARACVEEEPSLRPNAGEIVEKLSRLVEEILLEREEQLIISESSCKPLF
KADATSTTM*

Transcript Sequence

Transcript ID

PGSC0003DMT400052075
Transcript Infomation

pacid=37428121 locus=PGSC0003DMG400020216 ID=PGSC0003DMT400052075.v4.03 annot-version=v4.03
Sequence

ATGATAGTCGCTTTTCAATTCTGGGCTTTCCTATTTTTCTTACTATTTGTTACTCTTTCT
GTTCTTGGAGAGGACTTGTTAAGCTGCGAGTCCAAATCTCCATCTGCTTCTGGCTATCGA
TGTGACCATAACGTGCATCCTATACAATGCGGGACATTTGCAATTCTTCGTACTAATTCA
TTTTACGACTCTCTTTTCAATCTGAGCTCTTATTTAGGTATCAATCGATACGTTCTCGGA
GAAGCAAATGGATTTTCTCCTGATATAGAGTTTCTTGCAATTGATCAGCCTTTAATAATT
CCATTAGATTGTAAATGCATTGGTGGTTTCTTTGAATCAGCGCTAACGAAAACCACCATT
AAAGGTGAGAGCTTTTACAGCATTGCTCAATCTTTGGAAGGTTTAACGACTTGTAAAAAA
ATTCAGGAGAAAAATCCAAATGTTACCCCTTGGGGTCTCTCTGAGAAAATTCTGTTGTCG
ATTCCATTGAGATGTGCTTGTCCTTCTCCAGAAGAAATTAGTCTGCGGACGAAACTTCTG
CTCTCATATCCAGTGAAGCAAGGCGATACGATTGCAGCCTTAGCAATCAGCTTCAATACG
ACTGCTGAAAGAATAATTGATGTCAATCGAAGATCACAAGGAGGCAGTTTTAGACCTGAA
GGACTTTCACCACCTTCAACACTTTTGATCCCTCTCGAAGGTAAACCCAAACTTGAATCA
TTCACGAAACCTCAGCAGCCGAATTTGGGATATCCAGCAGCAAGTATCGCGTCATCTAAA
ATACATAAAAAGAAGACCAAAATTCGGATGATGAGAGTTTATATTGCTGTTGCTGTGGTT
GCTTTCGTGGCAATTGTTGCGCTCGCAGCAGTTTTCTTGTTTTGTTTTCTCAAGAGGAAA
AGGAATAATTTGAGTAAGGAAGGAGATACGGAGCTACAAAAGTTAAGTTTGAGTGTGAGA
ACTACTAGTGAAAAGAAAGTTTCATTCGACGGGTCTCAAAATGATCTTGATGGTCAGATT
ATTGATGCCACACCACATAAGCTATTGGTTGAGACCTATACTATTGAAGAGATAAAGAAA
GCAACAGAGGAATTTGATTCCTCGAATCTTATCGAGGATTCTGTATTCCATGGCCGGATC
AGTGGTAAAAATTTGGCAATCAAACAGATGGAGACTAGCAGTATCTCAAAAATAGATTTC
GGGCTATTCAACGATGCAATTCATCATCACCCAAATATCATTAGGCTCTTAGGGACGTGT
GTTACAGAGGGTCCTGATTCATTCTTGGTGTTTGAATACGCGAAAAATGGTTCATTGAAG
GACTGGCTTCATGGTGGTCTAGCAATGAAAAATCAATTCATTGCTTCATGTGATTGTTTC
TTGACATGGAATCAGAGGCTAAGGATCTGTTTAGATGTAGCCACTGCCTTGCAATTTATG
CACCATATCATGGATCCTGTTTATGTTCATGGTAATATAAAGAGCCGGAACATATTTCTT
GATGAAGAGTTCAAGGCTAAAGTTGGTAATTTTGGTATGGCTCGATGTGTTGAAGATGAT
GTTGCAAAAGGTTACCTGGCGCCAGAGTGCCTTAAACAAGAAATCATAACCCCGAGCATT
GATATCTTTGCTTTCGGGGTGATATTACTTGAGGTGTTATCAGGCCAAACACCTATAAGA
AGTGGCAATGGTACTGAAGGAGAAGATGAAGTTGCCCTCTCTGAGAAAATAAAGGTTATT
TTGGAGTCAGAGAATGCTGATGAGCTAAGGGAATGGGTAGACAGCGCGTTGGGAGAGAAT
TATTCATTTGATGCAGCAGTGACATTGGCAAATTTGGCTAGAGCATGTGTGGAGGAAGAG
CCGTCATTAAGACCAAATGCTGGTGAAATTGTGGAGAAGTTGTCAAGATTGGTTGAAGAA
ATATTACTGGAAAGGGAGGAGCAACTCATAATCTCCGAAAGCTCTTGCAAACCTTTGTTC
AAGGCTGATGCCACCAGTACTACCATGTGA