Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400052060
CDS Infomation

pacid=37426159 polypeptide=PGSC0003DMP400035084 locus=PGSC0003DMG400020209 ID=PGSC0003DMT400052060.v4.03 annot-version=v4.03
Sequence

ATGGTTCGTTTGAAAGAGAGATTCAGTTTGTTCTTCAATAACAGATGGCTTGTATTCGTA
GCTGCAATGTGGATTCAGAGTTTTGCTGGCATTGGGTATTTATTCGGCAGTATTTCTCCC
ATCATTAAGAGCTCTTTGAATTATAATCAGAAGCAAATTGCCAGATTGGGTGTCGCTAAG
GACTTGGGCGATAGTGTTGGATTTCTGGCTGGGACTTTATCCGAAATCTTGCCTTTATGG
GCTGCTCTTCTTGTGGGTGCTGTTCAGAACTTCATTGGTTATGGCTGGGTTTGGCTCATC
GTCACCGGCCGATCTCCTACTCTTCCTTTATGGGTTATGTGCCTTCTTATATTTATAGGA
ACAAATGGAGAAACCTACTTTAATACAGCCGCACTTGTCTCAGGTGTGCAAAATTTCCCT
AAAAGCCGTGGCCCTGTGGTGGGAATACTGAAGGGATTTGCTGGGTTGGGTGGTGCAATT
ATGACTCAAATATATGCACTGATCCATTCCCCCGATCATGCTTCACTTATATTTATGATT
GCTGTGGGACCGGCAATGGTGGCTATCGCCCTCATGTTTATAATCAGGCCTGTTGGTGGC
CACAGACAAGTCAGACCATCTGACGGATTCAGTTTTTCATTAATTTACAGCATTTGCCTC
ATTTTGGCTTCTTACCTGATGGGCGTCATGCTTGTTCAAGACCTCATTGATGTTAGCCAC
ACAGTCACTACAATCTTCACAGGGATTTTGTTTGTTCTATTGCTTATTCCTGTGGCGATT
CCCATCTCATTGACTTTCTCGCAAGAAACTAGAGTACCATCAGAAGAGGCTCTTTTATCT
GAGTCACAAAAACAAGATCCTGGAGTATCTGGACATGATCAGGAAATTATATTTAGTGAG
GTTGAAGATGAGAAGCCTAAGGATGTAGACTTGCTTCCAGCATTAGAAAGGCAAAAAAGA
ATTGCCCAACTGCAAGCAAAACTAGCCCAAGCAGCTGCAGAGGGAGCAGTGAGGGTCAAA
AGAAGACGGACCCCTCATAGAGGGGAGGACTTTACCCTAATGCAGGCTTTGATAAAGGCA
GACTTTTGGATTATATTCTTCTCACTACTTTTTGGTTCTGGATCTGGTTTAACCGTGATT
GATAACTTGGGCCAGATGAGCCAATCTTTAGGATATGATAACACACATGTATTTGTTTCC
ATGATCAGCATATGGAACTTCCTCGGTCGTGTTGGGGGTGGATACTTTTCTGAAATAATT
GTGAGAGATCATGCCTACCCAAGACATGCAGCCATGGCTGTTGCCCAAGTTGTAATGGCT
TTCGGGCATTTCTTCTTTGCCATGGGCTGGCCAGGGGCTATGTACATTGGTACTCTTCTG
GTAGGGCTCGGTTATGGGGCTCATTGGGCTATCGTGCCAGCTGCTGCTTCCGAATTGTTT
GGCTTAAAGAATTTTGGGGCTTTGTACAATTTCCTCACTATTGCGAACCCAGCTGGTTCA
CTAATATTCTCAGGTGTTATTGCTAGTAGTATATATGATAGTGAAGCTGAAAAGCAAGCT
CAACAGCGTCATCCCGGCCAATGGAATGGGGCATCTTTTTTATCAAGTTTTCTAGCTGTG
GATGAACCTTTAAAGTGTGAAGGTGCCATATGCTTCTTCTATACTTCCTTAATACTTTGT
GGACTCTGCATCGTTGCTTCTATTCTAAGCATGATTCTGGTTTACCGAACAAAGACTGTA
TACACTAGTCTTTACGGAAAATCTCGTACATAA

Peptide Sequence

PEP ID

PGSC0003DMP400035084
PEP Infomation

pacid=37426159 transcript=PGSC0003DMT400052060 locus=PGSC0003DMG400020209 ID=PGSC0003DMT400052060.v4.03 annot-version=v4.03
Sequence

MVRLKERFSLFFNNRWLVFVAAMWIQSFAGIGYLFGSISPIIKSSLNYNQKQIARLGVAK
DLGDSVGFLAGTLSEILPLWAALLVGAVQNFIGYGWVWLIVTGRSPTLPLWVMCLLIFIG
TNGETYFNTAALVSGVQNFPKSRGPVVGILKGFAGLGGAIMTQIYALIHSPDHASLIFMI
AVGPAMVAIALMFIIRPVGGHRQVRPSDGFSFSLIYSICLILASYLMGVMLVQDLIDVSH
TVTTIFTGILFVLLLIPVAIPISLTFSQETRVPSEEALLSESQKQDPGVSGHDQEIIFSE
VEDEKPKDVDLLPALERQKRIAQLQAKLAQAAAEGAVRVKRRRTPHRGEDFTLMQALIKA
DFWIIFFSLLFGSGSGLTVIDNLGQMSQSLGYDNTHVFVSMISIWNFLGRVGGGYFSEII
VRDHAYPRHAAMAVAQVVMAFGHFFFAMGWPGAMYIGTLLVGLGYGAHWAIVPAAASELF
GLKNFGALYNFLTIANPAGSLIFSGVIASSIYDSEAEKQAQQRHPGQWNGASFLSSFLAV
DEPLKCEGAICFFYTSLILCGLCIVASILSMILVYRTKTVYTSLYGKSRT*

Transcript Sequence

Transcript ID

PGSC0003DMT400052060
Transcript Infomation

pacid=37426159 locus=PGSC0003DMG400020209 ID=PGSC0003DMT400052060.v4.03 annot-version=v4.03
Sequence

ATGGTTCGTTTGAAAGAGAGATTCAGTTTGTTCTTCAATAACAGATGGCTTGTATTCGTA
GCTGCAATGTGGATTCAGAGTTTTGCTGGCATTGGGTATTTATTCGGCAGTATTTCTCCC
ATCATTAAGAGCTCTTTGAATTATAATCAGAAGCAAATTGCCAGATTGGGTGTCGCTAAG
GACTTGGGCGATAGTGTTGGATTTCTGGCTGGGACTTTATCCGAAATCTTGCCTTTATGG
GCTGCTCTTCTTGTGGGTGCTGTTCAGAACTTCATTGGTTATGGCTGGGTTTGGCTCATC
GTCACCGGCCGATCTCCTACTCTTCCTTTATGGGTTATGTGCCTTCTTATATTTATAGGA
ACAAATGGAGAAACCTACTTTAATACAGCCGCACTTGTCTCAGGTGTGCAAAATTTCCCT
AAAAGCCGTGGCCCTGTGGTGGGAATACTGAAGGGATTTGCTGGGTTGGGTGGTGCAATT
ATGACTCAAATATATGCACTGATCCATTCCCCCGATCATGCTTCACTTATATTTATGATT
GCTGTGGGACCGGCAATGGTGGCTATCGCCCTCATGTTTATAATCAGGCCTGTTGGTGGC
CACAGACAAGTCAGACCATCTGACGGATTCAGTTTTTCATTAATTTACAGCATTTGCCTC
ATTTTGGCTTCTTACCTGATGGGCGTCATGCTTGTTCAAGACCTCATTGATGTTAGCCAC
ACAGTCACTACAATCTTCACAGGGATTTTGTTTGTTCTATTGCTTATTCCTGTGGCGATT
CCCATCTCATTGACTTTCTCGCAAGAAACTAGAGTACCATCAGAAGAGGCTCTTTTATCT
GAGTCACAAAAACAAGATCCTGGAGTATCTGGACATGATCAGGAAATTATATTTAGTGAG
GTTGAAGATGAGAAGCCTAAGGATGTAGACTTGCTTCCAGCATTAGAAAGGCAAAAAAGA
ATTGCCCAACTGCAAGCAAAACTAGCCCAAGCAGCTGCAGAGGGAGCAGTGAGGGTCAAA
AGAAGACGGACCCCTCATAGAGGGGAGGACTTTACCCTAATGCAGGCTTTGATAAAGGCA
GACTTTTGGATTATATTCTTCTCACTACTTTTTGGTTCTGGATCTGGTTTAACCGTGATT
GATAACTTGGGCCAGATGAGCCAATCTTTAGGATATGATAACACACATGTATTTGTTTCC
ATGATCAGCATATGGAACTTCCTCGGTCGTGTTGGGGGTGGATACTTTTCTGAAATAATT
GTGAGAGATCATGCCTACCCAAGACATGCAGCCATGGCTGTTGCCCAAGTTGTAATGGCT
TTCGGGCATTTCTTCTTTGCCATGGGCTGGCCAGGGGCTATGTACATTGGTACTCTTCTG
GTAGGGCTCGGTTATGGGGCTCATTGGGCTATCGTGCCAGCTGCTGCTTCCGAATTGTTT
GGCTTAAAGAATTTTGGGGCTTTGTACAATTTCCTCACTATTGCGAACCCAGCTGGTTCA
CTAATATTCTCAGGTGTTATTGCTAGTAGTATATATGATAGTGAAGCTGAAAAGCAAGCT
CAACAGCGTCATCCCGGCCAATGGAATGGGGCATCTTTTTTATCAAGTTTTCTAGCTGTG
GATGAACCTTTAAAGTGTGAAGGTGCCATATGCTTCTTCTATACTTCCTTAATACTTTGT
GGACTCTGCATCGTTGCTTCTATTCTAAGCATGATTCTGGTTTACCGAACAAAGACTGTA
TACACTAGTCTTTACGGAAAATCTCGTACATAA