Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400052043
CDS Infomation

pacid=37427062 polypeptide=PGSC0003DMP400035069 locus=PGSC0003DMG400020200 ID=PGSC0003DMT400052043.v4.03 annot-version=v4.03
Sequence

ATGGATCTAACACAAACTTCTGATCAAACAATATGCAATGACAAACAGCCAGATATTCCA
GACGAAGCTCCTCCTCCCCATGAAACAGAGTCTACAGAAGCAGAGATTGTTGAACAACTG
CCAACAGACGATGGAGTCATCAAGACAACAGATGATGATGGTGCCAAGACAGACGATGAC
GACGACGACGAAGAGGTCAAGGTTGAAGTTTCTTCTCCCCTGCCTCCTGATCTCGATAAG
GTTTCAGAAGAAATAGATCAATTTATCTCTGAATCGTCAAACTTAAAAGGGGATGATGAT
GAATCTAAGCCTCCCGATGTTCCTGTGTTTGTAGAACAATTTGCTGTTCTTGTTGAGGCT
AAGATTGATGAATATGATGGTGGCGATGCACCCGTCAAATGGAGCCAGCTAGCTCAGGAG
GAAGCCACATCATTTTTGGATATTGTAGATCGAATCTCCAAGCTATTTACCTCCCTCTGT
CGATTTTCTACAGAGTACAAATATGCTTATTCAATCAGCCGTGTTGATGGTGTTCTTCAA
CGAGCAATGTCCTACATAGAGGAAGAATACAAGTCAATCCTCTACGAGTACAAGATCAAT
ACTGATTCAGATATCACCAATTCAGACACTTCTTCTGCCAAGCCTAACCCTAACCCTAAC
CCTAATTCTTATTCATCATCAGACACCAATCAAGATGCAGAACAAGACTCTGCTTCTGAA
GAAAATAAATTTCCAGGCTACTCTGAGGAAATCGTAGCCACCTTGAATAAATTTTCCAAA
GCCTTGATTGCAGGAGGCTACGAAACAGAATGCTGTCAGGTCTATTTCATCGCACGGAGG
AAAGCTTTGGAGGAAAGCTTGCATAAGCTTGGGTTTGAAAAATATAGCATCGACGATGTG
CAAAAGATGAATTGGGAACCATTGGAGAGAGAGGTTACTGCTTGGATTGCAACATTCAGG
CACTGCACTAATGTGCTCTTCTCCAGTGAACGCAAGCTCGCCGATGCCGTGTTTGAGGAC
CAACCATCAATTTCTGAGACCATCTTCAGCAATTTGTCTCGAGGTATGATGATCCAACTC
CTTAATTTCGCTGAAGCCGTTTCTATGACAAAACGGGCTGCTGAAAAACTCTTCAAGTTT
CTCGACATTTATGAGACTTTGCGGGATTTTATTCCTTTGGTGGATAAGATATTTCCGGTT
TCTTACGCTGATGAACTCAAGGCTGAAGCTACATTGAGTCGGGGACGTTTAGGAGAATCC
ATGGTTTCTATCTTTTCGGAGCTGGAAAACTCAATCCAGGGGGACTCAAACAAGACACCG
GTTCCAGGTGGTGCTGTTCATCCTTTAACTCGCTACATCATGAATTATCTGAAATATGTA
GGCGAGTACAGAGACACCTTAGAGCAGGTATTCAGAGAACATCAGATGATAGAAAGAGCT
GACTCAGCCACGGGATCAGACTTTGACTGCCAAAATCCACAAGCGGGTCAGAGTAATCAT
CATACATCATCACCTTTCGAGACTCATATGATAAAAGTCATGGATCTATTGGATTCAAAT
CTGGAGGGAAAATCAAGGCTTTACAAAGACACTTCACTCAGCTCAATATTCATGATGAAT
AACGGACGATACATCTTGCAAAAAATAAAAGGATCTCCAGAGATCAATAGCCTGATGGGG
GATCAATGGTACAGAAAGCGATCTTCAGATCTAAGACAGTACCACAAGAATTACCAAAGA
GAAACGTGGGGTAAATTGTTGCAATGTTTAAACCATGAGGGATTGAATGTGAATGGGAAA
GTGAATAAACCAATATTGAAAGAGAGGTTCAAGAGTTTCAATGCATTGTTTGACGAGATA
CACAAGACGCAGAGCAGTTGGGTTATTAGCGACGAGCAATTGCAGTCGGAGCTGAGAGTT
TCCATATCAAACATGGTTATACCAGCCTACAGGTCATTCTTGGGAAGGTTTAGTCAAACA
TTTACTCCGGGAAGGCAGACGGAGAAGTATGTAAAGTACCAACCTGAAGAAATTGAAACA
GACATTGATGAGCTATTCGATGGAAATGCTACGCCATGGGGGAGGAAGAAATTGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400035069
PEP Infomation

pacid=37427062 transcript=PGSC0003DMT400052043 locus=PGSC0003DMG400020200 ID=PGSC0003DMT400052043.v4.03 annot-version=v4.03
Sequence

MDLTQTSDQTICNDKQPDIPDEAPPPHETESTEAEIVEQLPTDDGVIKTTDDDGAKTDDD
DDDEEVKVEVSSPLPPDLDKVSEEIDQFISESSNLKGDDDESKPPDVPVFVEQFAVLVEA
KIDEYDGGDAPVKWSQLAQEEATSFLDIVDRISKLFTSLCRFSTEYKYAYSISRVDGVLQ
RAMSYIEEEYKSILYEYKINTDSDITNSDTSSAKPNPNPNPNSYSSSDTNQDAEQDSASE
ENKFPGYSEEIVATLNKFSKALIAGGYETECCQVYFIARRKALEESLHKLGFEKYSIDDV
QKMNWEPLEREVTAWIATFRHCTNVLFSSERKLADAVFEDQPSISETIFSNLSRGMMIQL
LNFAEAVSMTKRAAEKLFKFLDIYETLRDFIPLVDKIFPVSYADELKAEATLSRGRLGES
MVSIFSELENSIQGDSNKTPVPGGAVHPLTRYIMNYLKYVGEYRDTLEQVFREHQMIERA
DSATGSDFDCQNPQAGQSNHHTSSPFETHMIKVMDLLDSNLEGKSRLYKDTSLSSIFMMN
NGRYILQKIKGSPEINSLMGDQWYRKRSSDLRQYHKNYQRETWGKLLQCLNHEGLNVNGK
VNKPILKERFKSFNALFDEIHKTQSSWVISDEQLQSELRVSISNMVIPAYRSFLGRFSQT
FTPGRQTEKYVKYQPEEIETDIDELFDGNATPWGRKKL*

Transcript Sequence

Transcript ID

PGSC0003DMT400052043
Transcript Infomation

pacid=37427062 locus=PGSC0003DMG400020200 ID=PGSC0003DMT400052043.v4.03 annot-version=v4.03
Sequence

ATGGATCTAACACAAACTTCTGATCAAACAATATGCAATGACAAACAGCCAGATATTCCA
GACGAAGCTCCTCCTCCCCATGAAACAGAGTCTACAGAAGCAGAGATTGTTGAACAACTG
CCAACAGACGATGGAGTCATCAAGACAACAGATGATGATGGTGCCAAGACAGACGATGAC
GACGACGACGAAGAGGTCAAGGTTGAAGTTTCTTCTCCCCTGCCTCCTGATCTCGATAAG
GTTTCAGAAGAAATAGATCAATTTATCTCTGAATCGTCAAACTTAAAAGGGGATGATGAT
GAATCTAAGCCTCCCGATGTTCCTGTGTTTGTAGAACAATTTGCTGTTCTTGTTGAGGCT
AAGATTGATGAATATGATGGTGGCGATGCACCCGTCAAATGGAGCCAGCTAGCTCAGGAG
GAAGCCACATCATTTTTGGATATTGTAGATCGAATCTCCAAGCTATTTACCTCCCTCTGT
CGATTTTCTACAGAGTACAAATATGCTTATTCAATCAGCCGTGTTGATGGTGTTCTTCAA
CGAGCAATGTCCTACATAGAGGAAGAATACAAGTCAATCCTCTACGAGTACAAGATCAAT
ACTGATTCAGATATCACCAATTCAGACACTTCTTCTGCCAAGCCTAACCCTAACCCTAAC
CCTAATTCTTATTCATCATCAGACACCAATCAAGATGCAGAACAAGACTCTGCTTCTGAA
GAAAATAAATTTCCAGGCTACTCTGAGGAAATCGTAGCCACCTTGAATAAATTTTCCAAA
GCCTTGATTGCAGGAGGCTACGAAACAGAATGCTGTCAGGTCTATTTCATCGCACGGAGG
AAAGCTTTGGAGGAAAGCTTGCATAAGCTTGGGTTTGAAAAATATAGCATCGACGATGTG
CAAAAGATGAATTGGGAACCATTGGAGAGAGAGGTTACTGCTTGGATTGCAACATTCAGG
CACTGCACTAATGTGCTCTTCTCCAGTGAACGCAAGCTCGCCGATGCCGTGTTTGAGGAC
CAACCATCAATTTCTGAGACCATCTTCAGCAATTTGTCTCGAGGTATGATGATCCAACTC
CTTAATTTCGCTGAAGCCGTTTCTATGACAAAACGGGCTGCTGAAAAACTCTTCAAGTTT
CTCGACATTTATGAGACTTTGCGGGATTTTATTCCTTTGGTGGATAAGATATTTCCGGTT
TCTTACGCTGATGAACTCAAGGCTGAAGCTACATTGAGTCGGGGACGTTTAGGAGAATCC
ATGGTTTCTATCTTTTCGGAGCTGGAAAACTCAATCCAGGGGGACTCAAACAAGACACCG
GTTCCAGGTGGTGCTGTTCATCCTTTAACTCGCTACATCATGAATTATCTGAAATATGTA
GGCGAGTACAGAGACACCTTAGAGCAGGTATTCAGAGAACATCAGATGATAGAAAGAGCT
GACTCAGCCACGGGATCAGACTTTGACTGCCAAAATCCACAAGCGGGTCAGAGTAATCAT
CATACATCATCACCTTTCGAGACTCATATGATAAAAGTCATGGATCTATTGGATTCAAAT
CTGGAGGGAAAATCAAGGCTTTACAAAGACACTTCACTCAGCTCAATATTCATGATGAAT
AACGGACGATACATCTTGCAAAAAATAAAAGGATCTCCAGAGATCAATAGCCTGATGGGG
GATCAATGGTACAGAAAGCGATCTTCAGATCTAAGACAGTACCACAAGAATTACCAAAGA
GAAACGTGGGGTAAATTGTTGCAATGTTTAAACCATGAGGGATTGAATGTGAATGGGAAA
GTGAATAAACCAATATTGAAAGAGAGGTTCAAGAGTTTCAATGCATTGTTTGACGAGATA
CACAAGACGCAGAGCAGTTGGGTTATTAGCGACGAGCAATTGCAGTCGGAGCTGAGAGTT
TCCATATCAAACATGGTTATACCAGCCTACAGGTCATTCTTGGGAAGGTTTAGTCAAACA
TTTACTCCGGGAAGGCAGACGGAGAAGTATGTAAAGTACCAACCTGAAGAAATTGAAACA
GACATTGATGAGCTATTCGATGGAAATGCTACGCCATGGGGGAGGAAGAAATTGTAA