Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400051957
CDS Infomation

pacid=37453200 polypeptide=PGSC0003DMP400034998 locus=PGSC0003DMG400020166 ID=PGSC0003DMT400051957.v4.03 annot-version=v4.03
Sequence

ATGGCAGCGGAAGCAGCAGTGGCAGTAGCGGCAGTAGCACCAGTTTCTGCTCAAGTTGTT
GCGAATGCATTTGTGCAGCAATACTATCATATATTGCATCATTCGCCAGGGCTTGTATTC
AGGTTTTACCAGGATATAAGCAAGCTTGGACGTCCTGAAGAGGATGGATCCATGTGTATC
ACTACGACAATGCAAGCAATAAATGATAAGATACTCTCACTCAACTATGGAGATTTCAGA
GCAGAGATCAAGTCTGTGGATGCCCAAGAATCCTTTAATGGCGGGGTGCATGTCCTTGTA
ACTGGATATTTGACTGGGAAAGACAACTTGATCCGGAATTTCTGTCAAACTTTCTTCCTA
GCACCGCAAGATAGGGGGTACTTTGTCTTGAATGATATGTTTCGATATGTAGAGACTGCC
GGTCAGCATGATACAGTCCACGTTCCAGTAATTGATGCTGTGGCTCCTGTCACGCCAGAG
CAAATTGTTGCAGATCCACCTACAGTACCGCAGAATCACATTCCCGAGCAAAGCACTCCA
CCAGCGGAGGAAGCTGATGTGGGAGAAGTTTACAACCCATCTGAGAATGGTGATGTGACT
ATTGTTGAAGAGGAAGTGCCTGTGTCTGAGGTTGTCGATGAAGTCCAAGATGGCTCTGAA
GTGGTAGCTGAATCTGACAACAAAACTGGGGAAGTTCCTAAGAAGTCATATGCTTCAATT
GTCATGCATCTCAAGGAAAGTGCTGCAACCTTCTCCCCTCCTCCAGCACCTGCTTCTAGG
AAGCCTATGACAAAGAGTGTTGTGCAAGTGAATCAGCCTGCTGCCACAGCAACTGATGGC
CCATATTCCAGTTCAGATACCATTGATAACATAAATAACACAGAAGCAGCTGATGGCTAC
TCAATCTATATAAAAGGCTTGCCTATGAGTGCAACTGTGGCATTACTTGCGGATGAGTTC
AAGAAGTTTGGGCCAATAAAAAATGGAGGAATTCAAGTCAGAAGTAACAGGGGATTTTGT
TTTGGATTTGTGGAATTTGAAGTGGAAAGTGCTGTGCAAAAAGCAATCGAGGCTTCTCCA
GTTCTCATTGGTGATCGGCAAGCAGTGGTTGAGGAAAAGAGGTCTACTAATTCTCGACTT
AACACCAGAGGTGGTGGTAGGTTTCAATCCGGAAGGGGTGGTGGATTCAGGAACGATGGA
GGAAGAGGGCGAGGAAACTATGTAGGTGGCAGGGGCTATGGTCGAGATGATTTTAATGGA
AGAAATGAGTTCAACAACAGGGGTGGGAATCGTGGGGGTTCATCAAACCGTGGAGGTGAA
GGATATCGGCGAGCTGACAATACAGGTGGTGGGCGAATGAGTCGTGGTGGTGGAATGTCT
AATGGAACAGCCAAAACCCCGACACCTCGCTATTCTGCTACAGCTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400034998
PEP Infomation

pacid=37453200 transcript=PGSC0003DMT400051957 locus=PGSC0003DMG400020166 ID=PGSC0003DMT400051957.v4.03 annot-version=v4.03
Sequence

MAAEAAVAVAAVAPVSAQVVANAFVQQYYHILHHSPGLVFRFYQDISKLGRPEEDGSMCI
TTTMQAINDKILSLNYGDFRAEIKSVDAQESFNGGVHVLVTGYLTGKDNLIRNFCQTFFL
APQDRGYFVLNDMFRYVETAGQHDTVHVPVIDAVAPVTPEQIVADPPTVPQNHIPEQSTP
PAEEADVGEVYNPSENGDVTIVEEEVPVSEVVDEVQDGSEVVAESDNKTGEVPKKSYASI
VMHLKESAATFSPPPAPASRKPMTKSVVQVNQPAATATDGPYSSSDTIDNINNTEAADGY
SIYIKGLPMSATVALLADEFKKFGPIKNGGIQVRSNRGFCFGFVEFEVESAVQKAIEASP
VLIGDRQAVVEEKRSTNSRLNTRGGGRFQSGRGGGFRNDGGRGRGNYVGGRGYGRDDFNG
RNEFNNRGGNRGGSSNRGGEGYRRADNTGGGRMSRGGGMSNGTAKTPTPRYSATA*

Transcript Sequence

Transcript ID

PGSC0003DMT400051957
Transcript Infomation

pacid=37453200 locus=PGSC0003DMG400020166 ID=PGSC0003DMT400051957.v4.03 annot-version=v4.03
Sequence

ATGGCAGCGGAAGCAGCAGTGGCAGTAGCGGCAGTAGCACCAGTTTCTGCTCAAGTTGTT
GCGAATGCATTTGTGCAGCAATACTATCATATATTGCATCATTCGCCAGGGCTTGTATTC
AGGTTTTACCAGGATATAAGCAAGCTTGGACGTCCTGAAGAGGATGGATCCATGTGTATC
ACTACGACAATGCAAGCAATAAATGATAAGATACTCTCACTCAACTATGGAGATTTCAGA
GCAGAGATCAAGTCTGTGGATGCCCAAGAATCCTTTAATGGCGGGGTGCATGTCCTTGTA
ACTGGATATTTGACTGGGAAAGACAACTTGATCCGGAATTTCTGTCAAACTTTCTTCCTA
GCACCGCAAGATAGGGGGTACTTTGTCTTGAATGATATGTTTCGATATGTAGAGACTGCC
GGTCAGCATGATACAGTCCACGTTCCAGTAATTGATGCTGTGGCTCCTGTCACGCCAGAG
CAAATTGTTGCAGATCCACCTACAGTACCGCAGAATCACATTCCCGAGCAAAGCACTCCA
CCAGCGGAGGAAGCTGATGTGGGAGAAGTTTACAACCCATCTGAGAATGGTGATGTGACT
ATTGTTGAAGAGGAAGTGCCTGTGTCTGAGGTTGTCGATGAAGTCCAAGATGGCTCTGAA
GTGGTAGCTGAATCTGACAACAAAACTGGGGAAGTTCCTAAGAAGTCATATGCTTCAATT
GTCATGCATCTCAAGGAAAGTGCTGCAACCTTCTCCCCTCCTCCAGCACCTGCTTCTAGG
AAGCCTATGACAAAGAGTGTTGTGCAAGTGAATCAGCCTGCTGCCACAGCAACTGATGGC
CCATATTCCAGTTCAGATACCATTGATAACATAAATAACACAGAAGCAGCTGATGGCTAC
TCAATCTATATAAAAGGCTTGCCTATGAGTGCAACTGTGGCATTACTTGCGGATGAGTTC
AAGAAGTTTGGGCCAATAAAAAATGGAGGAATTCAAGTCAGAAGTAACAGGGGATTTTGT
TTTGGATTTGTGGAATTTGAAGTGGAAAGTGCTGTGCAAAAAGCAATCGAGGCTTCTCCA
GTTCTCATTGGTGATCGGCAAGCAGTGGTTGAGGAAAAGAGGTCTACTAATTCTCGACTT
AACACCAGAGGTGGTGGTAGGTTTCAATCCGGAAGGGGTGGTGGATTCAGGAACGATGGA
GGAAGAGGGCGAGGAAACTATGTAGGTGGCAGGGGCTATGGTCGAGATGATTTTAATGGA
AGAAATGAGTTCAACAACAGGGGTGGGAATCGTGGGGGTTCATCAAACCGTGGAGGTGAA
GGATATCGGCGAGCTGACAATACAGGTGGTGGGCGAATGAGTCGTGGTGGTGGAATGTCT
AATGGAACAGCCAAAACCCCGACACCTCGCTATTCTGCTACAGCTTGA