Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400051934
CDS Infomation

pacid=37451115 polypeptide=PGSC0003DMP400034979 locus=PGSC0003DMG400020155 ID=PGSC0003DMT400051934.v4.03 annot-version=v4.03
Sequence

ATGGAGAGAGAGTTACATGGTGTTAATAATGAAGATGAGAATACTAATTTGGTGGTATCA
GTGGATGATGATATTCAAATGCTACAGCAGCAGCAGCAGGATTGTACTGATTTTGATCCT
ATGGATGAAACAGATATTTGGCTAAATGAAAATTTCTCTACTGATTTTACTTCTCTTCAA
GATTTTCCATGCATGTCTTCTTCATCATCAACTTCCTTTTCCCCTCTTACTGAATCTGAT
CCATCTTCTGGGGTTGTTTTAAAATCTGATGCTGATGAACAAGATTTCGAAAAAAAATTC
GATACAATTGGTGACCAAGAATGTCTAAACGTCATGGATAATGTTGGATATATCGATGTT
AATGAGTTTCTTGACCCTATGATTTCATTTCTTCATAATGAAAATCCTCAGGAGCAGCAA
CAACAACCACCACCACAAGAAGGAGATGATCAGGGGCTTTCTTTTTTTCAAGGGGATAGT
GAGCTTGCACTTATGTTTTTCGAATGGCTAAAGCAAAACAAAGATTACATTTCTGCTGAA
GATATGAGGAGTATTAAGCTTAAACGTTCGACGATTGAAAGTGCTTCGAAACGATTGGGA
AGTACTAAAGAGGGGAAAAAACAGCTGTTAAGACTCATTCTTGATTGGGTTGAACAACAT
AGATTGCAAAAGAAACAAATGAGAGAAGCTGAAGCCATTAATCAACAAGTTCTTCAAAAC
TCTGTCCCTTATAATTTTGATCCAAATGCTTGTTTTTATCCCCCTCAGTGGATTCCAAAT
GCACCTTTCCCCGATTCGAGTACCCCAGTCATGACAGGGCCAATACAGGGGTACATTGGT
GATCCTTATTCGAACGGAGGTTTATTTCCACCTCCTTATAGTCAAACAATGAGTGGTGGT
GCAACTTCACCAACTTCAGCAGAATATCAACCCATGGACACTTCTCAGTCCTGGTCTCCG
TCGCAATTTACAATGGCGACCGCGTCTCAATACAATCCATTTCCTGAGAATGATAGTACA
AATAATGTTGCTATGCCTGATCAGTCTTTATTCGGTGCTCAATATGATCCCTACCAACTT
TTCGATGGGAATGGTGAGATATTGCCAAGGTTAGGATCTTGTGCTACTAAAGAAGCTAGG
AAGAACAGAATGGCTAGGCAGAGACGACTGCGGCCGCATCATTATCGCCACCAAACTCGA
ATTCCAAGACAAATTACTAATGAGCAAAGTGTAATGATGGGTGGGGAGATCAATAATAAT
TATGTAATGACTCAAGCTAACAATCCAGGAAACTGGGTATGTTGGCCTTCTCCACCAATG
GCGATGGTTTCACAATCACTTCCACCGGAGAGGCCGGCTATGCAATCACAGAACCAGCAG
AAGCAGGTTTCGGCTTCGGCTGACAAAAAACAGGCATTTAAATCAGAGAAGAATCTGAAG
TTTCTCCTGCAAAAAGTGCTGAAACAAAGCGACGTTAACAATCTCGGAAGAATTGTCTTG
CCAAAGAAAGAAGCAGAACGTCATCTTCCACATCTTGAAACAAGAGATGGAATTTCAATT
GCCATGGAAGACATCGGAACTTCTCGTGTTTGGAACATGAAATATAGATTTTGGCCAAAT
AACAAAAGCAGGATGTACCTTCTTGAGAACACAGGTGATTTTGTTAAAGCTAATGGACTT
CAAGAAGGCGATTTCATTGTAATATATGCTGACATGAAGTGTGGCAAATATTTGATACGA
GGAGTAAAAGTGAGGCAGAATGGACCAAAGTCGGAGGGCAAAAAACAAACGAAGAAAAAT
CCTCGTAAGTTGTCATCTGCAGCTGCCATTAGCTCATCTCCAGTTGCTCAAGCAGTTAGA
TAA

Peptide Sequence

PEP ID

PGSC0003DMP400034979
PEP Infomation

pacid=37451115 transcript=PGSC0003DMT400051934 locus=PGSC0003DMG400020155 ID=PGSC0003DMT400051934.v4.03 annot-version=v4.03
Sequence

MERELHGVNNEDENTNLVVSVDDDIQMLQQQQQDCTDFDPMDETDIWLNENFSTDFTSLQ
DFPCMSSSSSTSFSPLTESDPSSGVVLKSDADEQDFEKKFDTIGDQECLNVMDNVGYIDV
NEFLDPMISFLHNENPQEQQQQPPPQEGDDQGLSFFQGDSELALMFFEWLKQNKDYISAE
DMRSIKLKRSTIESASKRLGSTKEGKKQLLRLILDWVEQHRLQKKQMREAEAINQQVLQN
SVPYNFDPNACFYPPQWIPNAPFPDSSTPVMTGPIQGYIGDPYSNGGLFPPPYSQTMSGG
ATSPTSAEYQPMDTSQSWSPSQFTMATASQYNPFPENDSTNNVAMPDQSLFGAQYDPYQL
FDGNGEILPRLGSCATKEARKNRMARQRRLRPHHYRHQTRIPRQITNEQSVMMGGEINNN
YVMTQANNPGNWVCWPSPPMAMVSQSLPPERPAMQSQNQQKQVSASADKKQAFKSEKNLK
FLLQKVLKQSDVNNLGRIVLPKKEAERHLPHLETRDGISIAMEDIGTSRVWNMKYRFWPN
NKSRMYLLENTGDFVKANGLQEGDFIVIYADMKCGKYLIRGVKVRQNGPKSEGKKQTKKN
PRKLSSAAAISSSPVAQAVR*

Transcript Sequence

Transcript ID

PGSC0003DMT400051934
Transcript Infomation

pacid=37451115 locus=PGSC0003DMG400020155 ID=PGSC0003DMT400051934.v4.03 annot-version=v4.03
Sequence

ATGGAGAGAGAGTTACATGGTGTTAATAATGAAGATGAGAATACTAATTTGGTGGTATCA
GTGGATGATGATATTCAAATGCTACAGCAGCAGCAGCAGGATTGTACTGATTTTGATCCT
ATGGATGAAACAGATATTTGGCTAAATGAAAATTTCTCTACTGATTTTACTTCTCTTCAA
GATTTTCCATGCATGTCTTCTTCATCATCAACTTCCTTTTCCCCTCTTACTGAATCTGAT
CCATCTTCTGGGGTTGTTTTAAAATCTGATGCTGATGAACAAGATTTCGAAAAAAAATTC
GATACAATTGGTGACCAAGAATGTCTAAACGTCATGGATAATGTTGGATATATCGATGTT
AATGAGTTTCTTGACCCTATGATTTCATTTCTTCATAATGAAAATCCTCAGGAGCAGCAA
CAACAACCACCACCACAAGAAGGAGATGATCAGGGGCTTTCTTTTTTTCAAGGGGATAGT
GAGCTTGCACTTATGTTTTTCGAATGGCTAAAGCAAAACAAAGATTACATTTCTGCTGAA
GATATGAGGAGTATTAAGCTTAAACGTTCGACGATTGAAAGTGCTTCGAAACGATTGGGA
AGTACTAAAGAGGGGAAAAAACAGCTGTTAAGACTCATTCTTGATTGGGTTGAACAACAT
AGATTGCAAAAGAAACAAATGAGAGAAGCTGAAGCCATTAATCAACAAGTTCTTCAAAAC
TCTGTCCCTTATAATTTTGATCCAAATGCTTGTTTTTATCCCCCTCAGTGGATTCCAAAT
GCACCTTTCCCCGATTCGAGTACCCCAGTCATGACAGGGCCAATACAGGGGTACATTGGT
GATCCTTATTCGAACGGAGGTTTATTTCCACCTCCTTATAGTCAAACAATGAGTGGTGGT
GCAACTTCACCAACTTCAGCAGAATATCAACCCATGGACACTTCTCAGTCCTGGTCTCCG
TCGCAATTTACAATGGCGACCGCGTCTCAATACAATCCATTTCCTGAGAATGATAGTACA
AATAATGTTGCTATGCCTGATCAGTCTTTATTCGGTGCTCAATATGATCCCTACCAACTT
TTCGATGGGAATGGTGAGATATTGCCAAGGTTAGGATCTTGTGCTACTAAAGAAGCTAGG
AAGAACAGAATGGCTAGGCAGAGACGACTGCGGCCGCATCATTATCGCCACCAAACTCGA
ATTCCAAGACAAATTACTAATGAGCAAAGTGTAATGATGGGTGGGGAGATCAATAATAAT
TATGTAATGACTCAAGCTAACAATCCAGGAAACTGGGTATGTTGGCCTTCTCCACCAATG
GCGATGGTTTCACAATCACTTCCACCGGAGAGGCCGGCTATGCAATCACAGAACCAGCAG
AAGCAGGTTTCGGCTTCGGCTGACAAAAAACAGGCATTTAAATCAGAGAAGAATCTGAAG
TTTCTCCTGCAAAAAGTGCTGAAACAAAGCGACGTTAACAATCTCGGAAGAATTGTCTTG
CCAAAGAAAGAAGCAGAACGTCATCTTCCACATCTTGAAACAAGAGATGGAATTTCAATT
GCCATGGAAGACATCGGAACTTCTCGTGTTTGGAACATGAAATATAGATTTTGGCCAAAT
AACAAAAGCAGGATGTACCTTCTTGAGAACACAGGTGATTTTGTTAAAGCTAATGGACTT
CAAGAAGGCGATTTCATTGTAATATATGCTGACATGAAGTGTGGCAAATATTTGATACGA
GGAGTAAAAGTGAGGCAGAATGGACCAAAGTCGGAGGGCAAAAAACAAACGAAGAAAAAT
CCTCGTAAGTTGTCATCTGCAGCTGCCATTAGCTCATCTCCAGTTGCTCAAGCAGTTAGA
TAA