Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400051918
CDS Infomation

pacid=37449932 polypeptide=PGSC0003DMP400034968 locus=PGSC0003DMG400020149 ID=PGSC0003DMT400051918.v4.03 annot-version=v4.03
Sequence

ATGGTGAGAGGAATGCTGCGTAAACTTGCCAATCAGTCTCTTTCAGTCGCCGGAAAATGG
CAGCAGCAACAGCTCCGCCGCCTCAACATCCACGAGTATCAGGGAGCTGAGTTGATGGGA
AAATATGGAATCAATGTACCGAAAGGTGTTGCTGTTGCTTCCCTTGATGAAGTGAAAAAA
GCAATTCAAGACGTGTTCCCTAACCAAAGCGAGGTCGTTGTTAAGTCACAAGTCCTTGCT
GGTGGACGTGGCCTTGGAACGTTCAAAAATGGATTTCAGGGTGGAGTTCATATTGTCAAG
GCTGATCAGGCTGAAGAGATTGCCAGTAAAATGCTTGGACAGATACTTGTTACTAAGCAA
ACTGGAGCTCAAGGAAAAGTTGTCAGCAAGGTTTACCTATGTGAAAAGATGTCCTTGGTT
AATGAAATGTACTTTTCAATTATACTTGATCGTGCAACTGCTGGCCCTCTCATTATTGCT
TGTCGAAAGGGTGGAACCAGCATAGAAGACCTAGCAGAAAAATTTCCCGACATGATTATA
AAGGTTCCAATTGATGTTTTCAAAGGAATCAGTGATGAAGATGCCGCAAAGGTTGTTGAT
GGATTGGCTCCAAAAGTAGCAGACAGAAATGATTCAATTGAACAAGTGAAAAAGTTGTAC
AACCTTTTCTGTGAAACTGACTGCACAATGTTAGAGATCAACCCCCTTGCAGAAACATCT
GACAACAAGCTGGTAGCTGCAGATGCAAAGCTCAATTTTGACGATAATGCTGCTTACCGT
CAAAAAGAAATCTTTTCTCTTCGCGATTCATCACAAGAAGATCCTCGTGAGGTTGCTGCT
GCAAAAGCTGATTTGAATTATATTGGCTTGGATGGAGAAATTGGTTGCATGGTAAATGGT
GCTGGATTGGCAATGGCTACCATGGATATTATTAAGCTTCATGGGGGAACTCCAGCCAAT
TTTCTAGATGTTGGTGGAAATGCTTCTGAAGGCCAGGTTGTCGAGGCCTTCAAAATTTTG
ACTGCAGATGAGAAGGTGAAAGCTATTTTGGTGAACATCTTTGGAGGAATAATGAAGTGT
GATGTGATAGCCAGTGGTATTGTTAATGCTGCCAAACAGGTTCAACTGAAAGTGCCTGTG
ATTGTTCGTCTGGAAGGAACCAACGTCGAACAAGGGAAGAGAATTCTTAAGGAAAGTGGC
CTGAAACTGATTACCGCTGAGGATTTAGATGACGCAGCTGAAAAGGCAGTCAAGGCCTTA
GCTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400034968
PEP Infomation

pacid=37449932 transcript=PGSC0003DMT400051918 locus=PGSC0003DMG400020149 ID=PGSC0003DMT400051918.v4.03 annot-version=v4.03
Sequence

MVRGMLRKLANQSLSVAGKWQQQQLRRLNIHEYQGAELMGKYGINVPKGVAVASLDEVKK
AIQDVFPNQSEVVVKSQVLAGGRGLGTFKNGFQGGVHIVKADQAEEIASKMLGQILVTKQ
TGAQGKVVSKVYLCEKMSLVNEMYFSIILDRATAGPLIIACRKGGTSIEDLAEKFPDMII
KVPIDVFKGISDEDAAKVVDGLAPKVADRNDSIEQVKKLYNLFCETDCTMLEINPLAETS
DNKLVAADAKLNFDDNAAYRQKEIFSLRDSSQEDPREVAAAKADLNYIGLDGEIGCMVNG
AGLAMATMDIIKLHGGTPANFLDVGGNASEGQVVEAFKILTADEKVKAILVNIFGGIMKC
DVIASGIVNAAKQVQLKVPVIVRLEGTNVEQGKRILKESGLKLITAEDLDDAAEKAVKAL
A*

Transcript Sequence

Transcript ID

PGSC0003DMT400051918
Transcript Infomation

pacid=37449932 locus=PGSC0003DMG400020149 ID=PGSC0003DMT400051918.v4.03 annot-version=v4.03
Sequence

ATGGTGAGAGGAATGCTGCGTAAACTTGCCAATCAGTCTCTTTCAGTCGCCGGAAAATGG
CAGCAGCAACAGCTCCGCCGCCTCAACATCCACGAGTATCAGGGAGCTGAGTTGATGGGA
AAATATGGAATCAATGTACCGAAAGGTGTTGCTGTTGCTTCCCTTGATGAAGTGAAAAAA
GCAATTCAAGACGTGTTCCCTAACCAAAGCGAGGTCGTTGTTAAGTCACAAGTCCTTGCT
GGTGGACGTGGCCTTGGAACGTTCAAAAATGGATTTCAGGGTGGAGTTCATATTGTCAAG
GCTGATCAGGCTGAAGAGATTGCCAGTAAAATGCTTGGACAGATACTTGTTACTAAGCAA
ACTGGAGCTCAAGGAAAAGTTGTCAGCAAGGTTTACCTATGTGAAAAGATGTCCTTGGTT
AATGAAATGTACTTTTCAATTATACTTGATCGTGCAACTGCTGGCCCTCTCATTATTGCT
TGTCGAAAGGGTGGAACCAGCATAGAAGACCTAGCAGAAAAATTTCCCGACATGATTATA
AAGGTTCCAATTGATGTTTTCAAAGGAATCAGTGATGAAGATGCCGCAAAGGTTGTTGAT
GGATTGGCTCCAAAAGTAGCAGACAGAAATGATTCAATTGAACAAGTGAAAAAGTTGTAC
AACCTTTTCTGTGAAACTGACTGCACAATGTTAGAGATCAACCCCCTTGCAGAAACATCT
GACAACAAGCTGGTAGCTGCAGATGCAAAGCTCAATTTTGACGATAATGCTGCTTACCGT
CAAAAAGAAATCTTTTCTCTTCGCGATTCATCACAAGAAGATCCTCGTGAGGTTGCTGCT
GCAAAAGCTGATTTGAATTATATTGGCTTGGATGGAGAAATTGGTTGCATGGTAAATGGT
GCTGGATTGGCAATGGCTACCATGGATATTATTAAGCTTCATGGGGGAACTCCAGCCAAT
TTTCTAGATGTTGGTGGAAATGCTTCTGAAGGCCAGGTTGTCGAGGCCTTCAAAATTTTG
ACTGCAGATGAGAAGGTGAAAGCTATTTTGGTGAACATCTTTGGAGGAATAATGAAGTGT
GATGTGATAGCCAGTGGTATTGTTAATGCTGCCAAACAGGTTCAACTGAAAGTGCCTGTG
ATTGTTCGTCTGGAAGGAACCAACGTCGAACAAGGGAAGAGAATTCTTAAGGAAAGTGGC
CTGAAACTGATTACCGCTGAGGATTTAGATGACGCAGCTGAAAAGGCAGTCAAGGCCTTA
GCTTAG