Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400051887
CDS Infomation

pacid=37451276 polypeptide=PGSC0003DMP400034943 locus=PGSC0003DMG400020136 ID=PGSC0003DMT400051887.v4.03 annot-version=v4.03
Sequence

ATGGGTAACGCAGATAATTATGGATACCCATCAATGATGAATAATAATAATGGAGAAAAC
ACAGGGATACACAGAGTTGAAATTCCTCCACCACAGCCTTTTTTCAAGTCATTGAAAAAT
ACAGTGAAGGAAACATTATTTCCAGATGATCCACTTAAGCAATTCAAGAACCAAAAACCA
TTGAGAAAATTTATACTTGGAGTTCAATATTTTTTTCCAATTTTTGAATGGGGTTCAAGA
TACAATTTTGGTTTCTTCAAAGCAGATCTTATTGCTGGAATAACAATAGCTAGTCTTGCT
ATTCCTCAAGGAATAAGCTATGCTAAGCTGGGGAACTTGCCACCTATACTTGGCCTATAT
TCAAGTTTTATTCCACCATTAGTGTACGCATTAATGGGAAGTTCAAGAGATTTAGCAGTG
GGAACAGTTGCTGTTGGATCTCTTCTCATGGCTTCTATGTTGGGAGCTGAAGTTAACCCT
GCTGAAAATCCAACACTTTATCTTCATCTTGCTTTCACTGCCACTTTCTTCACCGGGTTA
TTCGAATTAGCACTCGGATTTTTCAGACTGGGATTTATAGTGGATTTTCTATCACATGCA
ACAATTGTGGGATTTATGGGAGGAGCAGCTACAGTAGTGATACTCCAGCAATTAAAAGGA
ATACTTGGTCTTGAACATTTTACTCATGCCACTGATGTTGTCTCTGTCTTACGTTCTGTA
TTTTCACAAACTCACGCGTGGCGATGGGAAAGTGCGGTGCTGGGATTTTGTTTCCTTTTC
TACTTGATGCTCGCCAAATTTTTGAGCCAGAAGAGACCAAAGCTGTTCTGGGTATCAGCA
ATGGCGCCATTGACGTCTGTCATATTGGGAACTATTCTCGTTTATATAACGCATGCTGAA
AAACACGGTGTTGCTGTGATTGGAGAGCTGAAGAAAGGGATAAATCCACCATCAATAATG
GATCTGTCGTTTGGATCGAAATATATGACGACGGCTATCAAAACTGGCATAGTCACGGGT
GTCATTGCCCTTGCTGAAGGAATAGCAGTAGGTCGAAGTTTTGCAATGTTCAAGAATTAC
CATATAGATGGTAACAAAGAGATGATTGCTTTTGGGATGATGAACATTGTTGGCTCATGC
ACCTCTTGTTACCTCACTACTGGGCCATTCTCGCGATCAGCAGTGAACTTCAACGCAGGA
TGCAAAACAGCAGTATCAAACATTGTCATGGCGTTGGCTGTGATGGTAACGTTGCTATTG
CTAACGCCATTGTTCCACTTCACTCCTCTCGTCGTGTTGTCATCCATTATTATTGCTGCC
ATGCTCGGACTCATCGACTATAATGCTGCCATTCATCTCTGGCATGTCGACAAATTCGAC
TTCTTAGTTTGCATGAGTGCATACATTGGTGTTGTCTTTGGCAACATTGAAATTGGCTTA
GTCATGGCTGTAAGTAGTACTTCCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400034943
PEP Infomation

pacid=37451276 transcript=PGSC0003DMT400051887 locus=PGSC0003DMG400020136 ID=PGSC0003DMT400051887.v4.03 annot-version=v4.03
Sequence

MGNADNYGYPSMMNNNNGENTGIHRVEIPPPQPFFKSLKNTVKETLFPDDPLKQFKNQKP
LRKFILGVQYFFPIFEWGSRYNFGFFKADLIAGITIASLAIPQGISYAKLGNLPPILGLY
SSFIPPLVYALMGSSRDLAVGTVAVGSLLMASMLGAEVNPAENPTLYLHLAFTATFFTGL
FELALGFFRLGFIVDFLSHATIVGFMGGAATVVILQQLKGILGLEHFTHATDVVSVLRSV
FSQTHAWRWESAVLGFCFLFYLMLAKFLSQKRPKLFWVSAMAPLTSVILGTILVYITHAE
KHGVAVIGELKKGINPPSIMDLSFGSKYMTTAIKTGIVTGVIALAEGIAVGRSFAMFKNY
HIDGNKEMIAFGMMNIVGSCTSCYLTTGPFSRSAVNFNAGCKTAVSNIVMALAVMVTLLL
LTPLFHFTPLVVLSSIIIAAMLGLIDYNAAIHLWHVDKFDFLVCMSAYIGVVFGNIEIGL
VMAVSSTS*

Transcript Sequence

Transcript ID

PGSC0003DMT400051887
Transcript Infomation

pacid=37451276 locus=PGSC0003DMG400020136 ID=PGSC0003DMT400051887.v4.03 annot-version=v4.03
Sequence

ATGGGTAACGCAGATAATTATGGATACCCATCAATGATGAATAATAATAATGGAGAAAAC
ACAGGGATACACAGAGTTGAAATTCCTCCACCACAGCCTTTTTTCAAGTCATTGAAAAAT
ACAGTGAAGGAAACATTATTTCCAGATGATCCACTTAAGCAATTCAAGAACCAAAAACCA
TTGAGAAAATTTATACTTGGAGTTCAATATTTTTTTCCAATTTTTGAATGGGGTTCAAGA
TACAATTTTGGTTTCTTCAAAGCAGATCTTATTGCTGGAATAACAATAGCTAGTCTTGCT
ATTCCTCAAGGAATAAGCTATGCTAAGCTGGGGAACTTGCCACCTATACTTGGCCTATAT
TCAAGTTTTATTCCACCATTAGTGTACGCATTAATGGGAAGTTCAAGAGATTTAGCAGTG
GGAACAGTTGCTGTTGGATCTCTTCTCATGGCTTCTATGTTGGGAGCTGAAGTTAACCCT
GCTGAAAATCCAACACTTTATCTTCATCTTGCTTTCACTGCCACTTTCTTCACCGGGTTA
TTCGAATTAGCACTCGGATTTTTCAGACTGGGATTTATAGTGGATTTTCTATCACATGCA
ACAATTGTGGGATTTATGGGAGGAGCAGCTACAGTAGTGATACTCCAGCAATTAAAAGGA
ATACTTGGTCTTGAACATTTTACTCATGCCACTGATGTTGTCTCTGTCTTACGTTCTGTA
TTTTCACAAACTCACGCGTGGCGATGGGAAAGTGCGGTGCTGGGATTTTGTTTCCTTTTC
TACTTGATGCTCGCCAAATTTTTGAGCCAGAAGAGACCAAAGCTGTTCTGGGTATCAGCA
ATGGCGCCATTGACGTCTGTCATATTGGGAACTATTCTCGTTTATATAACGCATGCTGAA
AAACACGGTGTTGCTGTGATTGGAGAGCTGAAGAAAGGGATAAATCCACCATCAATAATG
GATCTGTCGTTTGGATCGAAATATATGACGACGGCTATCAAAACTGGCATAGTCACGGGT
GTCATTGCCCTTGCTGAAGGAATAGCAGTAGGTCGAAGTTTTGCAATGTTCAAGAATTAC
CATATAGATGGTAACAAAGAGATGATTGCTTTTGGGATGATGAACATTGTTGGCTCATGC
ACCTCTTGTTACCTCACTACTGGGCCATTCTCGCGATCAGCAGTGAACTTCAACGCAGGA
TGCAAAACAGCAGTATCAAACATTGTCATGGCGTTGGCTGTGATGGTAACGTTGCTATTG
CTAACGCCATTGTTCCACTTCACTCCTCTCGTCGTGTTGTCATCCATTATTATTGCTGCC
ATGCTCGGACTCATCGACTATAATGCTGCCATTCATCTCTGGCATGTCGACAAATTCGAC
TTCTTAGTTTGCATGAGTGCATACATTGGTGTTGTCTTTGGCAACATTGAAATTGGCTTA
GTCATGGCTGTAAGTAGTACTTCCTAA