Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400051829
CDS Infomation

pacid=37453906 polypeptide=PGSC0003DMP400034900 locus=PGSC0003DMG401020115 ID=PGSC0003DMT400051829.v4.03 annot-version=v4.03
Sequence

ATGGCTGGATATGTAGGTGTTTTTGTATCTGATCCATGGCTTCAGAGTCAATTCACTCAG
GTCGAGCTTCGGCGTTTGAAATCTCACTTTAATGCGATGAAGAGAGAAAATGGAGGTCTG
ATGCTCGCAGACTTACCATCTAAAATGGCGAGAATAAAACACGTCGGTGAGAATCTTACA
GAACAAGAAAGAGAGTCGTTTCTCAGAGATTCCTACAAAAGTTTGGAAGAAGATGTTGAT
TTCGAGCTATTTCTTCAGGTTTATTTGAAAATCCAAGCACATGCTGCTGCAAGGATGGGA
AATACTGCAAAGAGTTCATCAGCTTTTGTCAAGTCAGCAACTTCTACATTGCTCCACACA
ATTAGTGAATCTGAGAAGGCATCGTATGTTGCACACATTAACAGCTATCTTGCGGATGAT
GAATTTTTGAAGAAATACCTTCCTATTGATCCTTTAACTAATGATCTCTTTGAGGTTTCC
AAGGATGGAGTTCTTATTTGCAAGCTTATCAATGTGGCTGTACCTGGAACAATTGATGAA
CGGGCTATAAACATGAAGAGAATGTTGAATCCATGGGAAAGGAATGAAAATCATACCTTG
TGCCTCAACTCTGCTAAGGCAATTGGATGTACTCTAGTGAATATTGGCACTCAAGACTTT
ATTGAAGGAAGGAGGCATCTTGTTCTTGGAGTGATATCTCAAATTATTAAGATTCAACTA
TTGGCGGACCTCAACTTAAAGAAAACACCTCAATTGTTGGAGTTAGTTGATGATAACAAG
GATGCAGAGGAGCTGATGAGTCTACCTCCAGAAAAAATCTTGCTCAGATGGATGAATTTT
CAATTGAAGAAAGCTAAATATGAGAAAATTGTGACTAACTTCTCATCTGACATAAAGGAT
GCAGAAGCTTATGCTCACCTCTTAAATGTTCTTGCCCCAGAGTACATTAATCCTACAACA
CTCACTGTGAAAGACCATTTAGAAAGAGCAAAGTTCGTATTGGAACATGCGGGTAGGATG
GGTTGCAAAAGATACTTAACAGCGAAAGATATTGTGGAAGGCTCTCCAAATCTTAACCTT
GCATTTGTAGCACATATCTTTCAGCTCAGGAATGGGCTGTCAACTCAAACAAAGCAAATA
TCCTTTCTGGAGATTTCACCAGATGAAGCTCAAATGTCCAGGGAAGAGAGAGCTTTCCGC
TTTTGGATCAATAGTCTTGGAAATTCATCTTACATAGACAATGTTTTTGAAGATCTCAGA
AATGGATGGTTGCTTTTAGAGACACTTGACAAGGTGTCTCCTGGAATTGTTAATTGGAAA
ATTGCTACTAAGCCTCCAATTAAGATGCCATTCAGAAAAGTAGAAAACTGCAACCAAGTT
GTGAAGATCGGGAAGCAACTGAAGTTTTCTCTTGTAAATATTGCTGGAAATGACATTGTA
CAGGGAAATAAGAAATTAATATTGGCTTACTTGTGGCAGTTAATGCGATGTAACATGCTT
CAGCTCTTGAAGAATTTGAGATTTCATTCCAACGGGAAGGAAATCACTGATGCAGATATC
TTAGAGTGGTCCAACAGCAAAGTAAGAAATTCAGGAAGCAAGAGTCGCATGACTAGTTTT
AAGGATAAGAGTTTGTCAGATGGCATCTTTTTCCTTGAGCTGCTTAGTGCTGTACACCCT
CGAGCTGTTAACTGGAGTCTTGTTACAAAAGGAGAAACTGAGGAGCAAAAGAAGATGAAC
GCAACCTACATTATCAGTATTGCAAGGAAACTTGGATGTTCAATATTTTTATTACCCGAA
GATCTGATTGAGGTAAATCAAAAGATGATGCTTACACTCACAGCAAGTATAATGTATTGG
CACTTGAAACAACCAATGGAGGACCAAATTTCAATTTCAGATAGTGATAGTAGCTCAGTG
GACACAATTTCAACCTCAACGTTGGATGATACCGCATCTGAGTGTTCAATGGATGACAAC
AGCAACAGATAA

Peptide Sequence

PEP ID

PGSC0003DMP400034900
PEP Infomation

pacid=37453906 transcript=PGSC0003DMT400051829 locus=PGSC0003DMG401020115 ID=PGSC0003DMT400051829.v4.03 annot-version=v4.03
Sequence

MAGYVGVFVSDPWLQSQFTQVELRRLKSHFNAMKRENGGLMLADLPSKMARIKHVGENLT
EQERESFLRDSYKSLEEDVDFELFLQVYLKIQAHAAARMGNTAKSSSAFVKSATSTLLHT
ISESEKASYVAHINSYLADDEFLKKYLPIDPLTNDLFEVSKDGVLICKLINVAVPGTIDE
RAINMKRMLNPWERNENHTLCLNSAKAIGCTLVNIGTQDFIEGRRHLVLGVISQIIKIQL
LADLNLKKTPQLLELVDDNKDAEELMSLPPEKILLRWMNFQLKKAKYEKIVTNFSSDIKD
AEAYAHLLNVLAPEYINPTTLTVKDHLERAKFVLEHAGRMGCKRYLTAKDIVEGSPNLNL
AFVAHIFQLRNGLSTQTKQISFLEISPDEAQMSREERAFRFWINSLGNSSYIDNVFEDLR
NGWLLLETLDKVSPGIVNWKIATKPPIKMPFRKVENCNQVVKIGKQLKFSLVNIAGNDIV
QGNKKLILAYLWQLMRCNMLQLLKNLRFHSNGKEITDADILEWSNSKVRNSGSKSRMTSF
KDKSLSDGIFFLELLSAVHPRAVNWSLVTKGETEEQKKMNATYIISIARKLGCSIFLLPE
DLIEVNQKMMLTLTASIMYWHLKQPMEDQISISDSDSSSVDTISTSTLDDTASECSMDDN
SNR*

Transcript Sequence

Transcript ID

PGSC0003DMT400051829
Transcript Infomation

pacid=37453906 locus=PGSC0003DMG401020115 ID=PGSC0003DMT400051829.v4.03 annot-version=v4.03
Sequence

ATGGCTGGATATGTAGGTGTTTTTGTATCTGATCCATGGCTTCAGAGTCAATTCACTCAG
GTCGAGCTTCGGCGTTTGAAATCTCACTTTAATGCGATGAAGAGAGAAAATGGAGGTCTG
ATGCTCGCAGACTTACCATCTAAAATGGCGAGAATAAAACACGTCGGTGAGAATCTTACA
GAACAAGAAAGAGAGTCGTTTCTCAGAGATTCCTACAAAAGTTTGGAAGAAGATGTTGAT
TTCGAGCTATTTCTTCAGGTTTATTTGAAAATCCAAGCACATGCTGCTGCAAGGATGGGA
AATACTGCAAAGAGTTCATCAGCTTTTGTCAAGTCAGCAACTTCTACATTGCTCCACACA
ATTAGTGAATCTGAGAAGGCATCGTATGTTGCACACATTAACAGCTATCTTGCGGATGAT
GAATTTTTGAAGAAATACCTTCCTATTGATCCTTTAACTAATGATCTCTTTGAGGTTTCC
AAGGATGGAGTTCTTATTTGCAAGCTTATCAATGTGGCTGTACCTGGAACAATTGATGAA
CGGGCTATAAACATGAAGAGAATGTTGAATCCATGGGAAAGGAATGAAAATCATACCTTG
TGCCTCAACTCTGCTAAGGCAATTGGATGTACTCTAGTGAATATTGGCACTCAAGACTTT
ATTGAAGGAAGGAGGCATCTTGTTCTTGGAGTGATATCTCAAATTATTAAGATTCAACTA
TTGGCGGACCTCAACTTAAAGAAAACACCTCAATTGTTGGAGTTAGTTGATGATAACAAG
GATGCAGAGGAGCTGATGAGTCTACCTCCAGAAAAAATCTTGCTCAGATGGATGAATTTT
CAATTGAAGAAAGCTAAATATGAGAAAATTGTGACTAACTTCTCATCTGACATAAAGGAT
GCAGAAGCTTATGCTCACCTCTTAAATGTTCTTGCCCCAGAGTACATTAATCCTACAACA
CTCACTGTGAAAGACCATTTAGAAAGAGCAAAGTTCGTATTGGAACATGCGGGTAGGATG
GGTTGCAAAAGATACTTAACAGCGAAAGATATTGTGGAAGGCTCTCCAAATCTTAACCTT
GCATTTGTAGCACATATCTTTCAGCTCAGGAATGGGCTGTCAACTCAAACAAAGCAAATA
TCCTTTCTGGAGATTTCACCAGATGAAGCTCAAATGTCCAGGGAAGAGAGAGCTTTCCGC
TTTTGGATCAATAGTCTTGGAAATTCATCTTACATAGACAATGTTTTTGAAGATCTCAGA
AATGGATGGTTGCTTTTAGAGACACTTGACAAGGTGTCTCCTGGAATTGTTAATTGGAAA
ATTGCTACTAAGCCTCCAATTAAGATGCCATTCAGAAAAGTAGAAAACTGCAACCAAGTT
GTGAAGATCGGGAAGCAACTGAAGTTTTCTCTTGTAAATATTGCTGGAAATGACATTGTA
CAGGGAAATAAGAAATTAATATTGGCTTACTTGTGGCAGTTAATGCGATGTAACATGCTT
CAGCTCTTGAAGAATTTGAGATTTCATTCCAACGGGAAGGAAATCACTGATGCAGATATC
TTAGAGTGGTCCAACAGCAAAGTAAGAAATTCAGGAAGCAAGAGTCGCATGACTAGTTTT
AAGGATAAGAGTTTGTCAGATGGCATCTTTTTCCTTGAGCTGCTTAGTGCTGTACACCCT
CGAGCTGTTAACTGGAGTCTTGTTACAAAAGGAGAAACTGAGGAGCAAAAGAAGATGAAC
GCAACCTACATTATCAGTATTGCAAGGAAACTTGGATGTTCAATATTTTTATTACCCGAA
GATCTGATTGAGGTAAATCAAAAGATGATGCTTACACTCACAGCAAGTATAATGTATTGG
CACTTGAAACAACCAATGGAGGACCAAATTTCAATTTCAGATAGTGATAGTAGCTCAGTG
GACACAATTTCAACCTCAACGTTGGATGATACCGCATCTGAGTGTTCAATGGATGACAAC
AGCAACAGATAA